LSIL lesion of the vagina

N14_VAGINAL_LSIL

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

only females

313377

2. Check conditions

None

313377

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 N89.0
  • Cause of death: ICD-10 N89.0

2 out of 7 registries used, show all original rules.

647

4. Check minimum number of events

None

647

5. Include endpoints

None

647

6. Filter based on genotype QC (FinnGen only)

587

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

First used in FinnGen datafreeze
DF7

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2429 2429 -
Only index persons 2363 2363 -
Unadjusted period prevalence (%)
Whole population 0.07 0.07 -
Only index persons 0.09 0.09 -
Median age at first event (years)
Whole population - 50.78 -
Only index persons - 50.56 -

-FinnGen-

Key figures

All Female Male
Number of individuals 587 587 -
Unadjusted period prevalence (%) 0.21 0.21 -
Median age at first event (years) 52.93 52.93 -

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
607
Matched controls
6070
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
LEB00
NOMESCO Finland
Biopsy of vagina
125.4
307.7
340
61
ULA02
NOMESCO Finland
Kolposcopy
59.7
307.7
520
552
R87.6
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal cytological findings
33.2
307.7
469
564
N89.0
ICD-10 Finland
Mild vaginal dysplasia
+∞
307.7
607
*
LEB30
NOMESCO Finland
Destruction of lesion of vaginal mucosa
165.7
303.6
150
12
XLD00
NOMESCO Finland
Sytologyspecimen from mouth of uterus
15.5
268.4
400
671
LDA20
NOMESCO Finland
Biopsy of vaginal cervix
16.1
263.5
305
359
N87.0
ICD-10 Finland
Mild cervical dysplasia
25.8
256.5
198
112
LFB00
NOMESCO Finland
Biopsy of vulva or perineum
20.7
180.9
149
94
A63.0
ICD-10 Finland
Anogenital (venereal) warts
17.2
174.2
160
124
R87.5
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal microbiological findings
22.9
165.5
128
70
LDA10
NOMESCO Finland
Curettage of cervix uteri
11.2
143.8
178
216
LDC03
NOMESCO Finland
Conisation of cervix uteri using diathermy or laser
11.7
141.1
168
193
N89.1
ICD-10 Finland
Moderate vaginal dysplasia
284.6
75.2
75
*
N90.0
ICD-10 Finland
Mild vulvar dysplasia
102.0
66.5
72
8
N87.1
ICD-10 Finland
Moderate cervical dysplasia
9.4
56.9
72
86
LDB20
NOMESCO Finland
Electrocoagulation or laser therapy of cervix uteri
17.7
55.3
46
28
8077/2-C53.9
ICD-O-3
Squamous intraepithelial neoplasia, high grade of cervix uteri
9.8
51.0
62
70
8077/2-C52.9
ICD-O-3
Squamous intraepithelial neoplasia, high grade of vagina, NOS
271.9
49.8
50
*
N89.2
ICD-10 Finland
Severe vaginal dysplasia, not elsewhere classified
108.8
46.5
50
5
N87.2
ICD-10 Finland
Severe cervical dysplasia, not elsewhere classified
7.6
45.4
68
99
LC2BE
NOMESCO Finland
Transvaginal ultrasound examination of uterus, parametria and lower abdomen
2.7
31.1
337
1929
D06BB10
ATC
imiquimod; topical
4.8
30.3
73
167
L04AX01
ATC
azathioprine; systemic
5.1
23.8
52
109
LFB20
NOMESCO Finland
Destruction of lesion of vulva or perineum
21.7
22.8
33
16
G01AA10
ATC
clindamycin; vaginal
2.4
21.0
185
924
N90.1
ICD-10 Finland
Moderate vulvar dysplasia
49.8
20.3
24
5
ZXC10
NOMESCO Finland
Use of laser
6.2
20.2
35
59
N90.2
ICD-10 Finland
Severe vulvar dysplasia, not elsewhere classified
32.5
19.4
25
8
X86
ICPC
Abnormal cervix smear
7.8
17.1
24
32
A63.8
ICD-10 Finland
Other specified predominantly sexually transmitted diseases
34.4
15.8
20
6
G03CA03
ATC
estradiol; nasal, systemic, rectal, transdermal, vaginal
2.0
14.1
419
3184
8077/2-C51.9
ICD-O-3
Squamous intraepithelial neoplasia, high grade of vulva, NOS
29.1
13.0
17
6
202
Kela drug reimbursment
Connective tissue diseases, rheumatoid arthritis and comparable disease
2.3
11.6
93
436
D06BB04
ATC
podophyllotoxin; topical
2.8
10.6
54
203
LCA06
NOMESCO Finland
Biopsy of endometrium
2.0
10.0
130
733
LX1AE
NOMESCO Finland
Gynecological ultrasound examination as part of clinical examination
2.0
9.9
117
638
LEB10
NOMESCO Finland
Excision of lesion of vagina
12.5
9.9
17
14
NK6QA
NOMESCO Finland
Measurement of bone density from two or more locations with X-ray
2.5
9.4
63
272
ZXC00
NOMESCO Finland
Use of diathermy
10.3
9.1
17
17
L04AA06
ATC
mycophenolic acid; systemic
5.0
8.9
19
39
ULC02
NOMESCO Finland
Hysteroscopy
2.5
8.8
55
230
P01BA02
ATC
hydroxychloroquine; oral
2.2
8.4
74
359
ZYC05
NOMESCO Finland
Non-real-time text-based remote communication
4.9
8.2
18
38
LFB10
NOMESCO Finland
Excision of lesion of vulva or perineum
6.4
8.1
20
32
Z09.0
ICD-10 Finland
Follow-up examination after surgery for other conditions
2.2
8.0
71
347
GD1DD
NOMESCO Finland
High resolution CT examination of lungs
3.0
7.9
35
122
T81.0
ICD-10 Finland
Haemorrhage and haematoma complicating a procedure, not elsewhere classified
2.5
7.4
45
185
R87.0
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal level of enzymes
20.3
7.1
10
5
R87.7
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal histological findings
12.2
7.1
12
10
L04AD02
ATC
tacrolimus; systemic
8.4
6.9
14
17
GD1AA
NOMESCO Finland
Thorax X-ray examination
1.6
6.7
255
1914
N30.0
ICD-10 Finland
Acute cystitis
1.7
6.5
135
873
N87.9
ICD-10 Finland
Dysplasia of cervix uteri, unspecified
11.2
6.3
11
10
B97.7
ICD-10 Finland
Papillomavirus as the cause of diseases classified to other chapters
12.7
6.1
10
8
M05BA04
ATC
alendronic acid; oral
2.1
6.0
55
271
Z11.3
ICD-10 Finland
Special screening examination for infections with a predominantly sexual mode of transmission
2.3
6.0
44
198

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
163
171
12.66
146.10
4.0
1.8
—
—
—
0
0
426
2477
3.41
43.06
3.8
2.1
—
—
—
0
0
114
486
2.66
17.77
1.6
1.4
—
—
—
0
0
106
497
2.37
13.29
4.1
3.5
7.38
7.36
ph
1.59
61
350
65
287
2.42
9.22
4.4
1.8
19.01
7.08
iu/ml
1.04
20
72
161
1069
1.69
7.05
1.7
1.6
—
—
—
0
0
40
163
2.56
6.74
2.6
2.2
1.49
1.43
g/l
0.15
35
139
29
101
2.97
6.56
1.9
3.8
1.12
2.02
ratio
1.14
17
60
147
969
1.68
6.56
1.6
1.4
596.28
593.58
titre
0.01
43
218
113
701
1.75
6.26
1.6
1.5
—
—
—
0
0
13
17
7.79
6.15
3.8
2.7
0.59
0.63
mmol/l
0.75
13
17
241
1825
1.53
5.91
10.2
6.0
—
—
—
0
0
480
4225
1.65
5.87
11.7
7.6
78.95
76.31
u/l
0.52
451
4006
11
13
8.59
5.58
1.8
1.4
—
—
—
0
0
234
1791
1.50
5.32
2.7
2.1
—
—
—
0
0
224
1701
1.50
5.29
3.5
2.4
57.60
60.79
u/l
0.44
210
1574
65
360
1.90
5.19
2.1
1.8
1.20
1.38
g/l
0.61
60
337
15
40
3.82
5.12
2.9
3.4
—
—
—
0
0
183
1341
1.52
5.08
2.7
2.1
—
—
—
0
0
342
2842
1.47
5.04
8.9
5.9
9.80
9.81
umol/l
0.01
327
2704
291
2349
1.46
4.96
7.8
5.4
1.22
1.22
mmol/l
0.30
257
2174
24
89
2.77
4.90
1.8
1.3
—
—
—
0
0
60
330
1.91
4.90
4.0
2.8
74.05
74.90
e9/l
0.07
46
238
87
539
1.72
4.81
2.3
2.0
0.05
0.04
estimate
0.01
22
114
226
1746
1.47
4.79
3.3
2.8
—
—
—
0
0
352
2958
1.45
4.78
10.4
6.1
2.01
1.95
e9/l
0.41
326
2640
171
1250
1.51
4.76
2.2
1.9
—
—
—
0
0
53
283
1.96
4.72
2.7
2.0
0.00
0.01
estimate
0.50
18
95
321
2657
1.44
4.69
8.9
6.1
1.22
1.22
mmol/l
0.07
275
2304
380
3246
1.46
4.69
13.5
9.3
3.77
3.91
e9/l
0.76
338
2841
24
92
2.67
4.61
1.4
1.6
0.51
0.68
g/l
0.36
18
77
33
148
2.30
4.59
6.9
6.7
—
—
—
0
0
344
2893
1.44
4.56
10.5
6.1
0.53
0.53
e9/l
0.17
306
2522
179
1334
1.48
4.51
1.6
1.5
2.19
2.19
g/l
0.01
111
842
31
139
2.30
4.32
2.8
2.7
1.78
2.16
index
0.14
18
70
343
2900
1.42
4.31
10.6
6.2
0.04
0.04
e9/l
0.29
303
2527
75
460
1.72
4.30
1.4
1.3
—
—
—
0
0
354
3012
1.42
4.28
10.9
6.4
0.17
0.18
e9/l
0.37
321
2662
416
3648
1.45
4.23
6.1
4.4
—
1489.79
—
0
47
92
600
1.63
4.19
8.7
4.5
1.03
1.04
mmol/l
0.08
83
542
40
202
2.05
4.17
1.6
1.6
—
13.52
—
0
6
67
402
1.75
4.15
1.4
1.3
25.56
42.84
au/ml
—
5
36
279
2287
1.41
4.12
6.4
4.2
36.61
36.55
g/l
0.07
261
2175
72
443
1.71
4.09
4.5
2.8
1.95
1.89
%
0.17
60
397
282
2324
1.40
4.00
2.1
2.0
101.62
99.43
pmol/l
0.33
141
1179
316
2658
1.39
3.96
10.8
6.2
8.45
8.40
%
0.14
295
2498
315
2657
1.39
3.83
10.5
6.1
2.65
2.80
%
0.62
294
2491
110
764
1.54
3.83
3.6
2.8
4.36
4.53
e6/l
0.05
50
333
314
2651
1.38
3.78
10.6
6.2
0.72
0.72
%
0.02
294
2480
317
2687
1.38
3.69
10.4
6.0
55.57
56.66
%
0.96
298
2571
326
2777
1.38
3.68
3.0
2.5
78.57
78.06
nmol/l
0.13
289
2567
40
213
1.94
3.63
1.6
1.2
14.03
1.97
u/ml
—
8
22
40
214
1.93
3.58
1.6
1.2
14.73
12.68
u/ml
—
10
42
89
599
1.57
3.55
1.8
1.6
—
—
—
0
0
12
31
3.93
3.50
1.8
2.2
824.33
501.64
e6/l
1.07
12
25
118
851
1.48
3.42
2.8
2.3
83.53
109.81
ug/g
0.99
91
669
202
1607
1.39
3.41
4.6
3.1
27.22
53.17
e6/l
1.21
158
1196
557
5257
1.72
3.41
5.3
4.7
5.64
5.75
mmol/l
1.98
505
4918
318
2721
1.35
3.37
10.6
6.1
30.39
29.14
%
1.44
301
2591
69
443
1.63
3.35
2.8
2.4
27.19
25.09
au/ml
—
8
41
178
1400
1.38
3.19
2.6
2.2
2.74
2.76
mg/l
0.07
147
1211
15
55
2.77
3.17
1.4
1.3
2.95
2.93
g/l
—
10
43
176
1383
1.38
3.17
4.3
2.9
0.30
0.37
e6/l
0.30
127
981
308
2643
1.34
3.11
3.0
2.5
—
—
estimate
—
0
0
143
1094
1.40
3.00
3.9
2.5
8.50
8.57
e6/l
0.01
135
998
33
177
1.91
2.97
1.4
1.3
—
—
—
0
0
592
5725
2.38
2.93
16.5
11.4
24.45
23.91
u/l
0.40
575
5592
18
76
2.41
2.92
4.1
2.8
25.89
31.59
umol/l
0.95
18
68
107
782
1.45
2.89
2.7
2.3
2.36
2.42
g/l
0.52
101
730
23
109
2.15
2.88
1.7
1.4
—
—
—
0
0
6
9
6.72
2.87
4.3
3.1
—
—
—
0
0
8
18
4.49
2.80
2.9
2.1
52.88
51.16
ug/l
—
8
18
21
98
2.18
2.74
1.8
1.4
143.76
174.57
au/ml
—
5
29
157
1238
1.36
2.73
2.8
2.9
810.05
829.40
ng/l
0.03
133
1047
14
54
2.63
2.72
1.5
1.3
—
—
—
0
0
6
10
6.05
2.70
1.0
1.3
—
—
—
0
0
184
1489
1.34
2.69
1.8
1.6
22.39
21.65
nmol/l
0.24
158
1283
106
785
1.42
2.67
1.3
1.3
—
—
—
0
0
49
308
1.64
2.62
1.5
2.1
—
—
—
0
0
192
1570
1.33
2.60
1.3
1.3
0.62
1.85
u/ml
2.17
46
441
84
599
1.47
2.58
4.6
2.3
7.32
5.77
umol/l
0.28
76
524
6
11
5.50
2.55
1.7
1.1
—
—
—
0
0
26
467
0.54
2.54
4.4
3.6
—
—
—
0
0
12
45
2.70
2.46
1.1
1.1
—
—
—
0
0
32
184
1.78
2.37
4.2
3.1
—
—
—
0
0
11
40
2.78
2.28
1.8
2.0
28.67
46.26
%
3.95
11
40
441
4713
0.76
2.22
21.6
16.3
13.63
13.48
%
1.83
436
4657
13
54
2.44
2.21
1.5
1.1
—
83.87
—
0
6
14
61
2.33
2.16
1.8
1.3
—
—
—
0
0
336
3008
1.26
2.14
5.7
4.3
6.27
6.42
mmol/l
0.55
310
2811
229
1960
1.27
2.13
5.8
3.7
64.34
75.44
e6/l
0.13
164
1290
425
3915
1.29
2.12
4.5
3.1
38.47
39.41
u/l
0.13
401
3732
30
176
1.74
2.10
1.5
1.2
54.80
46.32
u/ml
—
8
17
0
55
0.00
2.07
0.0
1.0
—
0.29
—
0
23
192
1614
1.28
2.05
5.3
3.8
0.02
0.01
estimate
0.31
59
598
332
2982
1.25
2.00
5.0
3.7
0.00
0.00
estimate
0.50
60
613
93
709
1.37
1.99
3.0
2.4
24.83
23.21
%
0.40
88
666
187
1573
1.27
1.98
3.8
3.3
83.01
38.52
mg/l
0.86
87
935
31
187
1.69
1.98
1.6
1.2
—
—
—
0
0
22
120
1.86
1.95
1.2
1.2
—
—
—
0
0
5
11
4.57
1.94
2.2
1.8
—
—
—
0
0
568
5485
1.55
1.93
18.2
14.4
3.92
3.92
mmol/l
0.01
553
5362
189
1597
1.27
1.92
2.6
2.1
102.38
181.55
u/l
1.24
180
1518
0
50
0.00
1.89
0.0
1.0
—
0.43
—
0
14
39
253
1.58
1.89
1.2
1.2
—
—
—
0
0
0
52
0.00
1.89
0.0
2.1
—
1.19
—
0
52
66
479
1.42
1.88
5.4
4.3
0.35
0.87
%
1.69
26
119
0
53
0.00
1.87
0.0
2.2
—
106.47
—
0
53
0
53
0.00
1.87
0.0
2.2
—
3.94
—
0
53
213
1831
1.25
1.86
3.5
3.2
18.63
65.03
ng/l
0.67
131
1092
333
3008
1.24
1.84
5.1
3.7
0.00
4.65
estimate
0.80
58
627
72
533
1.40
1.84
1.2
1.2
—
—
—
0
0
53
371
1.47
1.83
1.7
2.6
66.20
67.61
g/l
0.63
46
347
87
666
1.36
1.82
1.7
1.3
—
—
—
0
0
67
491
1.41
1.82
6.2
4.8
0.00
0.20
%
1.55
26
100
18
95
1.92
1.77
1.2
1.1
2.50
5.46
u/ml
—
8
35
334
3027
1.23
1.76
5.1
3.8
0.00
0.02
estimate
1.08
58
600
55
391
1.45
1.76
3.1
2.3
0.18
0.58
e6/l
0.85
48
369
588
5738
1.79
1.75
22.0
16.6
68.21
67.57
umol/l
0.32
576
5678
200
1721
1.24
1.71
3.7
3.2
6.56
6.98
mmol/l
0.88
164
1471
59
430
1.41
1.66
4.5
3.7
4.52
4.63
pmol/l
0.42
52
383
104
831
1.30
1.63
5.0
3.0
0.81
0.82
mmol/l
0.50
94
784
67
501
1.38
1.63
5.3
4.4
0.42
1.13
%
2.82
26
126
10
42
2.40
1.62
3.8
3.2
28.30
16.47
mu/l
—
10
42
275
2458
1.22
1.62
2.0
1.9
1.31
1.33
mmol/l
0.18
238
2136
94
742
1.32
1.61
1.8
1.7
—
—
—
0
0
565
5474
1.46
1.61
17.9
14.3
139.61
139.77
mmol/l
0.79
550
5366
201
1742
1.23
1.60
3.3
3.0
—
0.86
—
0
7
64
481
1.37
1.52
5.4
4.5
0.00
0.11
%
2.96
23
106
7
27
2.61
1.52
1.3
1.4
143.14
167.28
mmol/24h
—
7
27
7
27
2.61
1.52
4.1
2.1
1.37
1.30
nmol/l
—
7
20
77
597
1.33
1.50
2.3
2.1
394.06
381.84
nmol/l
0.22
69
563
0
45
0.00
1.50
0.0
1.0
—
0.09
—
0
9
16
87
1.86
1.47
1.3
1.2
—
—
—
0
0
10
45
2.24
1.47
2.6
1.5
—
—
—
0
0
10
45
2.24
1.47
1.0
1.0
313.60
295.12
mg/l
—
10
40
331
3031
1.20
1.47
3.6
3.2
85.70
80.51
ug/l
0.33
310
2871
7
28
2.52
1.45
1.9
2.6
116.29
189.29
e6/l
—
7
28
49
355
1.41
1.45
9.8
7.8
—
—
—
0
0
13
66
1.99
1.44
2.3
2.0
—
—
—
0
0
5
16
3.14
1.44
1.4
2.1
—
—
—
0
0
142
1202
1.24
1.40
5.1
3.8
—
—
—
0
0
74
933
0.76
1.37
2.9
3.4
186.22
222.33
ng/l
0.10
50
602
183
1593
1.21
1.37
4.2
3.9
17.34
8.76
mg/mmol
0.64
86
920
94
760
1.28
1.36
1.7
1.7
1030.99
1210.11
nmol/l
1.37
71
574
25
159
1.60
1.36
1.2
1.8
8.38
10.05
g/l
1.77
20
150
5
17
2.96
1.36
1.0
1.0
—
—
—
0
0
275
2489
1.19
1.35
13.4
10.2
0.00
0.00
e9/l
0.39
224
2041
92
743
1.28
1.35
3.3
3.4
7.31
4.60
e9/l
0.36
80
671
11
54
2.06
1.33
3.6
3.9
0.66
0.87
nmol/l
—
5
45
56
422
1.36
1.33
5.2
3.3
81.67
74.71
ng/l
0.22
50
379
222
1981
1.19
1.26
5.5
3.0
28.26
28.67
u/l
0.12
213
1885
23
147
1.59
1.24
1.2
1.4
23.57
26.22
u/l
0.13
16
122
6
25
2.41
1.24
1.0
1.5
123.17
148.28
nmol/l
—
6
25
600
5929
2.04
1.22
28.1
20.6
30.36
30.15
pg
2.44
593
5882
600
5929
2.04
1.22
28.2
20.7
4.38
4.44
e12/l
2.57
587
5820
600
5929
2.04
1.22
28.3
20.8
6.67
6.56
e9/l
0.21
586
5812
600
5929
2.04
1.22
28.7
21.0
39.65
39.94
%
1.13
592
5882
600
5928
2.05
1.22
28.2
20.7
91.23
90.85
fl
1.35
593
5882
600
5927
2.07
1.22
28.3
20.8
270.54
265.72
e9/l
1.03
590
5833
265
2409
1.18
1.20
4.7
3.3
6.33
6.22
ph
0.75
133
1393
112
940
1.23
1.20
3.8
2.7
475.63
496.26
mosm/kgh2o
0.52
102
827
561
5463
1.36
1.19
5.3
4.9
4.89
4.87
mmol/l
0.31
526
5170
11
57
1.95
1.17
2.0
1.4
—
—
—
0
0
45
335
1.37
1.17
1.4
1.2
—
—
—
0
0
0
34
0.00
1.16
0.0
1.2
—
—
—
0
0
8
40
2.01
1.12
1.1
1.1
—
—
—
0
0
600
5930
2.02
1.10
28.4
20.9
132.10
132.96
g/l
1.09
593
5884
7
32
2.20
1.08
1.7
1.7
—
2624.00
—
0
5
14
82
1.72
1.06
1.4
1.3
733.86
332.93
mu/l
—
7
67
14
82
1.72
1.06
1.4
1.1
—
—
—
0
0
24
162
1.50
1.05
2.5
2.9
3225.89
260.90
mg/l
—
9
51
9
46
1.97
1.04
2.8
2.0
10.39
10.55
%
—
9
46
124
1068
1.20
1.03
1.6
1.6
467.63
30769673.87
pmol/l
1.31
109
923
5
22
2.28
1.03
1.4
2.6
16.76
16.30
%
—
5
22
54
423
1.30
1.03
5.5
3.2
5.94
5.78
kpa
0.52
54
415
9
47
1.93
1.02
1.3
1.4
—
—
—
0
0
217
1965
1.16
1.00
3.2
3.5
2.35
2.36
mmol/l
0.48
195
1814
5
23
2.18
0.98
2.8
3.5
1.00
0.96
index
—
5
23
37
276
1.36
0.98
4.0
3.0
7.44
7.42
ph
1.90
25
231
0
29
0.00
0.98
0.0
1.1
—
2000.47
—
0
15
156
1380
1.18
0.96
1.8
1.7
1.08
0.96
mg/l
0.26
114
1069
0
32
0.00
0.95
0.0
1.5
—
—
—
0
0
38
289
1.34
0.90
1.1
1.1
—
—
—
0
0
5
103
0.48
0.90
1.6
4.6
—
—
—
0
0
30
402
0.73
0.89
1.3
1.6
970.90
997.19
mu/l
0.06
22
320
53
424
1.27
0.88
5.3
3.2
7.37
7.38
ph
0.89
35
238
527
5125
1.21
0.87
6.0
5.6
37.28
38.15
mmol/mol
2.33
488
4856
61
498
1.25
0.86
1.3
1.3
215.36
162.61
u/ml
0.30
56
463
231
2123
1.14
0.85
10.8
9.2
1.15
1.11
inr
0.57
182
1743
148
1318
1.16
0.84
3.8
2.4
302.58
307.55
umol/l
0.29
130
1184
563
5517
1.28
0.84
5.9
5.5
2.85
2.85
mmol/l
0.01
521
5202
11
65
1.71
0.83
2.5
1.7
32.76
64.04
u/ml
0.21
11
65
6
32
1.88
0.82
4.0
3.8
4519.67
646.16
u/ml
—
6
32
188
1709
1.14
0.81
8.5
5.9
—
—
—
0
0
556
5445
1.25
0.80
5.3
4.8
1.61
1.58
mmol/l
0.63
512
5126
0
24
0.00
0.79
0.0
1.9
—
—
—
0
0
0
25
0.00
0.79
0.0
1.0
—
—
—
0
0
11
66
1.68
0.79
1.5
1.5
—
—
—
0
0
11
66
1.68
0.79
1.5
1.5
—
—
—
0
0
11
66
1.68
0.79
1.5
1.5
—
—
—
0
0
11
66
1.68
0.79
1.5
1.5
—
—
—
0
0
0
26
0.00
0.78
0.0
1.4
—
6.25
—
0
8
0
27
0.00
0.77
0.0
1.1
—
38703.36
—
0
11
33
253
1.32
0.77
2.8
2.2
—
—
—
0
0
95
823
1.18
0.76
1.4
1.2
—
—
—
0
0
6
34
1.77
0.76
1.2
1.6
1.33
1.13
promille
—
6
25
6
34
1.77
0.76
2.0
2.3
1.80
6.80
nmol/l
—
6
29
14
91
1.55
0.75
1.0
1.0
—
—
—
0
0
13
196
0.66
0.75
1.4
1.4
—
—
—
0
0
9
54
1.68
0.74
1.2
1.1
—
—
—
0
0
529
5162
1.19
0.74
4.4
4.0
1.23
1.23
mmol/l
0.01
477
4823
575
5660
1.30
0.72
15.6
11.8
—
—
—
0
0
31
238
1.32
0.72
1.4
1.4
0.27
0.31
mg/l
0.19
14
95
18
126
1.44
0.71
1.9
2.3
—
—
—
0
0
143
1288
1.14
0.70
1.4
1.3
12.90
11.98
u/ml
0.06
57
532
152
1377
1.14
0.69
1.5
1.4
19.75
30.42
iu/ml
1.37
42
429
7
42
1.67
0.68
2.7
2.6
—
—
—
0
0
7
43
1.64
0.67
2.0
1.1
—
—
—
0
0
144
1303
1.14
0.66
5.9
3.7
1.02
1.02
kg/l
0.56
85
871
24
180
1.35
0.66
1.7
1.4
349.56
300.76
ug/g
0.56
16
102
81
703
1.18
0.65
1.9
1.3
—
—
—
0
0
34
269
1.28
0.65
3.7
2.9
128.88
130.46
g/l
0.21
34
263
5
29
1.73
0.64
1.2
1.7
115.20
76.77
nmol/24h
—
5
29
53
629
0.83
0.63
1.4
1.3
—
—
—
0
0
35
280
1.27
0.62
1.5
1.3
117.01
227.83
miu/ml
1.33
17
139
0
22
0.00
0.59
0.0
1.2
—
—
—
0
0
45
537
0.83
0.58
1.4
1.3
30.40
27.93
iu/l
0.17
37
466
6
36
1.67
0.57
1.0
1.2
—
—
—
0
0
8
55
1.46
0.56
1.0
1.2
—
—
—
0
0
226
2403
0.91
0.56
2.3
2.9
—
—
—
0
0
15
107
1.41
0.56
1.1
1.2
—
—
—
0
0
15
201
0.74
0.50
1.3
1.6
—
—
—
0
0
13
93
1.41
0.48
1.1
1.0
—
—
—
0
0
7
46
1.53
0.48
1.0
1.1
110.29
108.59
pmol/l
—
7
46
7
46
1.53
0.48
1.1
1.0
—
—
—
0
0
241
2285
1.09
0.47
4.8
3.5
2.10
0.03
estimate
0.50
49
504
115
1055
1.11
0.44
2.6
2.5
2.43
2.44
mmol/l
0.68
103
959
20
157
1.28
0.44
1.2
1.1
—
—
—
0
0
28
230
1.23
0.43
3.9
2.4
0.63
0.61
%
0.11
28
230
32
267
1.21
0.43
1.6
1.2
0.91
0.88
g/l
0.33
32
267
13
96
1.36
0.42
2.3
2.0
66.62
58.34
%
0.70
13
96
5
33
1.52
0.41
3.2
1.5
29.97
28.48
ug/l
—
5
33
0
15
0.00
0.41
0.0
1.1
—
0.02
—
0
15
0
16
0.00
0.41
0.0
1.0
—
—
—
0
0
0
16
0.00
0.41
0.0
1.1
—
7.42
—
0
11
0
17
0.00
0.40
0.0
1.1
—
61.10
—
0
17
8
60
1.34
0.40
1.0
1.2
—
—
—
0
0
12
88
1.37
0.40
1.3
1.8
—
—
—
0
0
8
61
1.32
0.39
1.1
1.2
—
—
—
0
0
28
233
1.21
0.39
3.9
2.5
1.20
1.19
%
0.01
28
233
46
401
1.16
0.39
8.2
6.5
1.28
1.18
mmol/l
0.20
46
395
0
19
0.00
0.39
0.0
1.4
—
—
—
0
0
553
5461
1.14
0.39
18.9
13.2
20.13
20.09
mg/l
0.01
462
4382
160
1700
0.92
0.38
3.5
3.2
5.00
0.02
estimate
0.49
50
498
52
587
0.88
0.38
1.7
1.5
—
—
—
0
0
10
136
0.73
0.38
1.0
1.1
0.48
0.85
u/ml
—
5
52
20
246
0.81
0.37
1.6
1.8
—
—
—
0
0
8
111
0.72
0.37
1.1
1.1
—
—
—
0
0
42
480
0.87
0.36
1.7
1.8
—
—
—
0
0
65
585
1.12
0.36
1.5
1.8
3.44
3.41
mmol/l
0.09
38
415
6
42
1.43
0.35
1.2
1.1
24.77
27.90
nmol/l
—
6
32
170
1608
1.08
0.35
6.5
3.7
7.40
7.40
ph
0.11
120
1125
6
44
1.37
0.34
9.8
1.3
57.17
6.40
ug/l
—
6
37
21
173
1.22
0.33
1.2
1.2
—
—
—
0
0
50
447
1.13
0.32
2.1
2.2
6.02
6.17
ph
0.60
27
278
7
97
0.72
0.31
1.4
1.5
—
—
—
0
0
7
97
0.72
0.31
2.9
2.5
—
—
—
0
0
20
239
0.83
0.30
1.4
1.4
—
—
—
0
0
20
238
0.83
0.29
1.3
1.4
—
—
—
0
0
26
224
1.17
0.27
1.2
1.4
110.38
171.99
pmol/l
0.45
26
219
78
724
1.09
0.26
2.1
1.9
—
—
—
0
0
19
223
0.85
0.24
1.5
1.4
—
—
—
0
0
16
191
0.83
0.24
1.5
1.3
—
—
—
0
0
6
85
0.70
0.24
1.3
1.1
—
—
—
0
0
24
274
0.87
0.23
1.4
1.7
248.21
306.48
mu/l
0.81
19
245
0
12
0.00
0.21
0.0
1.0
—
—
—
0
0
22
251
0.87
0.21
1.5
1.3
—
—
—
0
0
15
177
0.84
0.21
1.2
1.3
—
—
—
0
0
5
43
1.16
0.21
3.0
1.7
—
—
—
0
0
481
4752
1.06
0.21
5.4
5.0
14.54
14.50
pmol/l
0.13
447
4465
21
240
0.87
0.20
1.4
1.4
—
—
—
0
0
21
240
0.87
0.20
1.4
1.4
—
—
—
0
0
53
490
1.09
0.20
3.6
4.2
7.88
8.67
ug/l
0.05
42
396
75
798
0.93
0.20
1.5
1.4
—
—
—
0
0
0
14
0.00
0.20
0.0
2.0
—
0.46
—
0
14
0
14
0.00
0.20
0.0
1.6
—
64.14
—
0
14
0
14
0.00
0.20
0.0
1.1
—
—
—
0
0
537
5324
1.07
0.20
6.5
6.0
1.74
1.81
mu/l
0.88
497
5037
6
50
1.20
0.19
1.0
1.2
—
—
—
0
0
6
52
1.16
0.19
1.0
1.1
—
5.91
—
0
14
140
1453
0.95
0.18
7.6
4.4
—
—
—
0
0
11
91
1.21
0.17
3.3
2.4
10.75
5.80
umol/l
—
6
65
15
172
0.87
0.16
1.9
1.6
—
—
—
0
0
36
333
1.09
0.15
1.1
1.1
—
205.50
—
0
10
10
118
0.84
0.14
3.2
2.2
9.10
7.00
pmol/l
—
10
118
31
336
0.92
0.14
2.6
2.1
209.02
5935.63
u/l
—
8
147
11
94
1.17
0.13
2.9
2.1
12.91
13.28
%
0.61
11
94
61
580
1.06
0.13
1.2
1.2
98.89
139.82
u/ml
0.67
22
247
50
475
1.06
0.11
7.9
7.5
0.12
1.04
mmol/l
0.98
39
397
31
331
0.93
0.10
1.1
1.1
—
—
—
0
0
5
45
1.11
0.10
1.2
1.1
—
—
—
0
0
14
126
1.11
0.09
1.0
1.1
0.31
2.89
u/ml
—
6
57
6
55
1.09
0.09
1.3
1.1
—
—
—
0
0
50
479
1.05
0.08
8.1
7.6
7.42
7.42
ph
0.11
27
270
32
302
1.06
0.08
2.4
2.2
5.32
5.56
ug/l
0.05
24
267
7
68
1.03
0.08
1.0
1.5
16.59
22.17
ng/l
—
7
68
8
76
1.05
0.07
1.0
1.1
—
—
—
0
0
16
147
1.09
0.07
1.1
1.2
3.38
3.66
mmol/l
1.29
16
137
9
84
1.07
0.07
1.3
1.4
45.89
62.90
mmol/l
—
9
73
45
468
0.96
0.07
1.4
1.2
—
—
—
0
0
15
138
1.09
0.06
2.9
3.7
59.42
58.97
%
0.05
15
138
22
207
1.07
0.06
2.0
2.0
2.70
4.43
iu/l
—
8
87
71
727
0.97
0.05
1.8
1.8
—
—
—
0
0
14
130
1.08
0.04
1.1
1.1
—
—
—
0
0
14
130
1.08
0.04
1.1
1.1
—
—
—
0
0
166
1678
0.99
0.04
1.5
1.5
—
—
—
0
0
71
696
1.02
0.04
2.6
1.8
28.55
29.13
s
0.45
71
673
25
260
0.96
0.03
1.2
1.1
1.62
1.62
g/l
0.02
25
260
13
135
0.96
0.00
1.0
1.1
0.15
0.99
u/ml
—
5
61
17
165
1.03
0.00
1.1
1.1
0.90
1.89
u/ml
—
9
87
13
127
1.02
0.00
1.1
1.2
—
—
—
0
0
14
143
0.98
0.00
1.1
1.0
—
—
—
0
0
12
122
0.98
0.00
1.0
1.1
1.16
5.23
u/ml
—
6
49
25
252
0.99
0.00
1.8
1.7
—
—
—
0
0
11
111
0.99
0.00
3.1
3.8
4.01
4.40
e9/l
0.27
11
111
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
6
67
0.89
-0.00
1.0
1.1
—
—
nmol/l
—
0
0
0
5
0.00
-0.00
0.0
2.8
—
6.96
—
0
5
0
7
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
6
0.00
-0.00
0.0
4.5
—
0.21
—
0
6
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
33.93
—
0
6
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
2.3
—
445.00
—
0
8
5
58
0.86
-0.00
3.2
2.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
5.7
—
0.17
—
0
7
6
67
0.89
-0.00
1.3
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
54.86
—
0
7
0
5
0.00
-0.00
0.0
1.0
—
5.40
—
0
5

Mortality – FinRegistry

Association

Association between endpoint N14_VAGINAL_LSIL and mortality.

Females

Parameter HR [95% CI] p-value
N14_VAGINAL_LSIL 1.229 [1.05, 1.44] 0.012
Birth year 1.0 [0.99, 1.01] 0.998

During the follow-up period (1.1.1998 — 31.12.2019), 199 out of 2071 females with N14_VAGINAL_LSIL died.

Males

No data

Mortality risk

Mortality risk for people of age

years, who have N14_VAGINAL_LSIL.

N-year risk Females Males
1 0.104% No data
5 0.814% No data
10 2.011% No data
15 4.023% No data
20 7.318% No data

Relationships between endpoints

Index endpoint: N14_VAGINAL_LSIL – LSIL lesion of the vagina

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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