This is a non-core endpoint: only basic statistics are computed.
See these related core endpoints for full statistics:
Carcinoma in situ of oral cavity
CD2_INSITU_ORALCAVITY
No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
557745 |
1. Apply sex-specific ruleNone |
557745 |
2. Check conditions
|
556287 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
1 out of 7 registries used, show all original rules. |
49 |
4. Check minimum number of eventsNone |
49 |
5. Include endpoints |
101 |
6. Filter based on genotype QC (FinnGen only) |
89 |
Control definitions (FinnGen only)
Controls for this endpoint are individuals that are not cases.
Extra metadata
- Level in the ICD hierarchy
- 2
- First used in FinnGen datafreeze
- DF12
- Parent code in ICD-10
- D00-D09
- Name in latin
- Carcinoma in situ labii (oris)
Carcinoma in situ of oral cavity
based on the number of shared cases.
Similar with more cases:
Similar with less cases:
Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 89 | 36 | 53 |
| Unadjusted period prevalence (%) | 0.02 | 0.01 | 0.02 |
| Median age at first event (years) | 70.10 | 70.86 | 69.58 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 92
- Matched controls
- 920
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
EJA10
NOMESCO Finland
Biopsy of tongue or floor of mouth
105.9
32.6
34
5
K13.79
ICD-10 Finland
Change in the oral mucosa UNS
29.5
19.6
26
12
K13.29
ICD-10 Finland
Indefinite leukoplakia
+∞
18.3
17
*
D00.00
ICD-10 Finland
Cancer in situ on the lip red border
+∞
18.3
17
*
EJB10
NOMESCO Finland
Excision of tumor or other lesion of apex or body of tongue
73.6
16.4
18
*
K13.78
ICD-10 Finland
Other change in the oral mucosa
27.9
15.0
20
9
SAA03
NOMESCO Finland
Extended examination of mouth
5.1
13.5
57
223
C02.11
ICD-10 Finland
Malignant neoplasm of border of tongue
+∞
12.8
12
*
8070/2-C00.1
ICD-O-3
Squamous cell carcinoma in situ, NOS, of external lower lip
+∞
11.7
11
*
SBB00
NOMESCO Finland
Clinical photography of mouth and teeth
17.0
11.0
17
12
D00.06
ICD-10 Finland
Cancer in situ in another part of the tongue
+∞
9.5
9
*
EJB30
NOMESCO Finland
Excision of tumor or other lesion of floor of the mouth
98.7
8.6
9
*
K13.28
ICD-10 Finland
Other leukoplakia or disorder of epithelium of the palate or tongue
+∞
8.5
8
*
EAA30
NOMESCO Finland
Partial excision of lower lip
+∞
8.5
8
*
EAA10
NOMESCO Finland
Excision of lesion of lip
86.8
7.5
8
*
C021, 8077, 2
ICD-O-3
+∞
7.4
7
*
EN1BD
NOMESCO Finland
Very extensive CT examination of mouth and soft tissues of neck
24.6
6.8
9
*
WX110
NOMESCO Finland
Infiltration anesthesia
4.0
6.8
75
482
K13.20
ICD-10 Finland
Idiopathic leukoplakia
74.8
6.5
7
*
EP1CG
NOMESCO Finland
Extensive MRI examination of soft tissue of neck with high intesity magnet
74.8
6.5
7
*
D00.05
ICD-10 Finland
In situ cancer of the pharyngeal part of the tongue
+∞
6.3
6
*
QAE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in head or neck
4.2
6.3
19
54
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
9
7
14.06
5.71
1.2
1.1
—
—
—
0
0
59
419
2.14
3.01
9.3
7.3
1.19
1.21
mmol/l
0.53
50
366
27
142
2.28
2.96
2.2
3.0
0.68
1.09
e6/l
0.43
14
79
17
73
2.63
2.85
1.6
2.8
0.23
0.21
g/l
0.32
17
64
53
369
2.03
2.76
3.8
2.6
—
—
estimate
—
0
0
46
308
1.99
2.65
2.9
3.3
—
—
—
0
0
13
53
2.69
2.40
1.8
1.5
—
—
—
0
0
6
16
3.93
1.97
1.2
1.1
—
—
—
0
0
23
133
1.97
1.93
2.5
3.1
1.40
2.18
e6/l
—
10
71
36
248
1.74
1.73
3.0
3.1
1.17
0.45
e6/l
0.77
23
178
25
161
1.76
1.49
1.5
1.8
1588.20
1216.86
nmol/l
0.96
17
126
29
195
1.71
1.49
3.7
2.3
—
—
—
0
0
52
415
1.58
1.33
3.2
2.7
—
—
—
0
0
44
338
1.58
1.32
2.5
2.6
76.07
77.13
nmol/l
0.08
38
297
18
111
1.77
1.23
2.4
1.7
—
—
—
0
0
0
34
0.00
1.18
0.0
1.0
—
—
—
0
0
23
155
1.65
1.16
2.7
1.8
—
—
—
0
0
5
21
2.46
1.10
1.2
1.3
—
—
—
0
0
17
107
1.72
1.09
2.1
1.8
—
—
—
0
0
19
128
1.61
0.95
7.3
7.4
102.74
104.22
mmol/l
0.39
19
128
12
71
1.79
0.94
1.8
1.4
—
—
—
0
0
46
379
1.43
0.89
2.3
2.2
104.78
93.91
pmol/l
0.48
20
194
6
34
1.82
0.78
2.8
1.8
—
—
—
0
0
10
60
1.75
0.75
7.2
10.8
23.81
25.00
mmol/l
—
10
60
78
722
1.53
0.70
8.6
7.1
42.50
40.44
mmol/mol
0.84
73
674
12
78
1.62
0.69
1.4
2.4
1.72
1.59
%
0.17
12
65
32
257
1.38
0.69
2.0
1.8
18.38
20.65
nmol/l
0.48
25
212
8
49
1.69
0.64
2.5
2.5
1.69
1.46
%
—
8
49
6
35
1.76
0.59
1.8
1.7
—
—
—
0
0
79
744
1.44
0.52
25.9
17.7
36.27
25.17
mg/l
1.33
68
637
7
50
1.43
0.46
1.6
1.3
—
—
—
0
0
34
293
1.25
0.42
5.1
4.0
9.60
12.45
mg/mmol
0.27
25
186
0
15
0.00
0.41
0.0
1.5
—
—
—
0
0
0
16
0.00
0.41
0.0
1.5
—
—
—
0
0
0
17
0.00
0.41
0.0
1.4
—
—
—
0
0
11
80
1.43
0.40
2.1
2.2
362.91
393.40
nmol/l
0.22
11
73
0
19
0.00
0.39
0.0
1.4
—
—
—
0
0
61
573
1.19
0.29
3.9
4.3
14.94
14.93
pmol/l
0.02
55
518
12
95
1.30
0.28
6.8
8.8
—
—
—
0
0
14
114
1.27
0.27
4.4
5.4
29.17
31.85
%
—
6
71
17
143
1.23
0.25
1.2
1.3
20.25
31.10
iu/ml
—
6
48
14
115
1.26
0.25
8.7
4.2
218.93
238.28
u/l
0.79
14
110
36
327
1.17
0.25
1.7
2.0
1.39
1.30
mmol/l
0.26
29
268
71
738
0.83
0.24
6.3
5.7
6.28
6.06
mmol/l
0.57
64
672
7
93
0.73
0.23
1.3
1.5
—
—
—
0
0
48
448
1.15
0.22
15.1
9.9
4.31
4.23
e9/l
0.08
42
385
78
755
1.22
0.21
6.5
6.4
2.33
2.57
mmol/l
1.84
71
693
0
10
0.00
0.21
0.0
1.6
—
—
—
0
0
0
13
0.00
0.21
0.0
1.8
—
—
—
0
0
9
79
1.15
0.16
1.3
1.3
—
—
—
0
0
74
719
1.15
0.15
4.7
4.6
1.52
1.28
mmol/l
1.10
67
653
46
436
1.11
0.15
3.1
4.3
0.00
0.00
estimate
—
5
84
10
85
1.20
0.13
3.2
4.1
—
—
—
0
0
5
47
1.07
0.09
1.2
2.0
—
—
—
0
0
7
65
1.08
0.08
3.3
5.1
1.23
1.22
mmol/l
—
7
59
20
189
1.07
0.05
3.8
4.2
1.01
1.02
kg/l
1.19
13
118
36
348
1.06
0.05
3.7
4.3
30.00
45.51
ng/l
0.79
25
277
75
741
1.07
0.03
5.5
5.6
4.25
4.46
mmol/l
1.08
67
682
42
427
0.97
0.01
3.0
4.2
0.00
0.00
estimate
—
7
89
74
738
1.01
0.00
5.5
5.5
1.40
1.43
mmol/l
0.21
66
674
51
515
0.98
0.00
4.4
3.5
54.35
59.96
u/l
0.20
51
485
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.7
—
—
—
0
0
28
280
1.00
-0.00
4.9
4.6
16.14
21.22
%
1.21
11
141
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
5.2
—
10.13
—
0
6
0
6
0.00
-0.00
0.0
1.2
—
14.50
—
0
6
0
5
0.00
-0.00
0.0
3.8
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.6
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
117.20
—
0
5
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
5.2
—
4.65
—
0
6
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
43
430
1.00
-0.00
3.0
4.3
0.00
0.00
estimate
—
7
94
5
49
1.02
-0.00
1.4
2.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
45.00
—
0
5
0
8
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.2
—
168.73
—
0
9
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: CD2_INSITU_ORALCAVITY – Carcinoma in situ of oral cavity
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).