This is a non-core endpoint: only basic statistics are computed.
See these related core endpoints for full statistics:
Scarlet fever, including avohilmo
AB1_SCARLET_FEVER_WIDE
No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
557745 |
1. Apply sex-specific ruleNone |
557745 |
2. Check conditionsNone |
557745 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
3 out of 7 registries used, show all original rules. |
381 |
4. Check minimum number of eventsNone |
381 |
5. Include endpointsNone |
381 |
6. Filter based on genotype QC (FinnGen only) |
347 |
Control definitions (FinnGen only)
- Control exclude
- AB1_OTHER_BACTERIAL
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF13
Similar endpoints
↥List of similar endpoints to
Scarlet fever, including avohilmo
based on the number of shared cases.
Similar with more cases:
- Other bacterial diseases, including avohilmo
- Certain infectious and parasitic diseases, including avohilmo
- Any event in hilmo or specialist outpatient
Similar with less cases:
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 347 | 205 | 142 |
| Unadjusted period prevalence (%) | 0.07 | 0.07 | 0.07 |
| Median age at first event (years) | 14.64 | 14.74 | 14.49 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 360
- Matched controls
- 3600
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
A38
ICD-10 Finland
Scarlet fever
+∞
205.5
177
*
03419
ICD-8 Finland
Streptococcal sore throat and scarlet fever, Scarlatina NUD
+∞
96.3
88
*
03417
ICD-8 Finland
Streptococcal sore throat and scarlet fever, Scarlatina suspecta
+∞
45.8
43
*
0341A
ICD-9 Finland
Streptococcal sore throat and scarlatina, Scarlatina[SCARLATINA STREPTOCOCCUS BETAHAEMOLYTICUS,RYHMÄ-A]
+∞
16.8
16
*
A49.9
ICD-10 Finland
Bacterial infection, unspecified
27.7
15.8
21
8
0341X
ICD-9 Finland
Streptococcal sore throat and scarlatina, Scarlatina[SCARLATINA STREPTOCOCCUS BETAHAEMOLYTICUS,MUU]
+∞
15.7
15
*
A46
ICD-10 Finland
Erysipelas
4.6
11.7
29
68
A41.9
ICD-10 Finland
Sepsis, unspecified
+∞
9.4
9
*
03410
ICD-8 Finland
Streptococcal sore throat and scarlet fever, Scarlatina cum complicatione
+∞
8.4
8
*
J02.0
ICD-10 Finland
Streptococcal pharyngitis
3.5
8.1
29
89
03400
ICD-8 Finland
Streptococcal sore throat and scarlet fever, Streptococcal sore throat
23.0
6.7
9
*
J01FF01
ATC
clindamycin; systemic
1.9
6.1
85
496
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
23
54
4.48
9.26
1.7
1.7
—
—
—
0
0
19
38
5.22
9.20
1.4
1.4
—
—
—
0
0
44
190
2.50
6.73
2.6
2.3
—
—
—
0
0
20
59
3.53
5.95
1.4
1.3
—
—
—
0
0
17
34
5.19
5.95
1.7
1.6
—
—
—
0
0
9
7
13.14
5.61
1.6
1.3
—
—
—
0
0
16
37
4.48
5.00
1.6
1.8
—
—
—
0
0
15
42
3.68
4.82
1.4
1.5
—
—
—
0
0
8
7
11.65
4.80
1.6
1.3
—
—
—
0
0
8
7
11.65
4.80
1.6
1.3
—
—
—
0
0
13
26
5.15
4.67
1.5
1.6
—
—
—
0
0
137
1003
1.59
4.22
7.9
4.7
37.21
38.00
g/l
0.98
127
969
244
2041
1.61
4.20
8.8
6.5
82.53
81.93
u/l
0.06
234
1947
19
68
2.89
4.19
1.7
1.7
—
—
—
0
0
13
33
4.05
3.83
1.8
1.8
—
—
—
0
0
136
1014
1.55
3.79
2.1
1.8
—
—
—
0
0
17
63
2.78
3.54
1.8
1.7
—
—
—
0
0
7
10
7.11
3.38
1.6
1.4
—
—
—
0
0
10
24
4.25
3.22
1.3
1.7
—
—
—
0
0
163
1298
1.47
3.17
7.4
5.5
13.76
12.73
umol/l
0.20
155
1239
28
139
2.10
3.15
1.6
1.6
—
—
—
0
0
12
35
3.51
3.13
4.8
3.3
9.07
6.19
u/ml
0.21
12
35
24
113
2.20
3.08
1.5
1.3
—
—
—
0
0
106
783
1.50
2.97
2.9
2.8
13.03
27.04
ng/l
2.29
58
384
41
245
1.76
2.71
1.7
1.5
—
—
—
0
0
85
611
1.51
2.69
2.1
2.0
1.01
0.98
mg/l
0.04
62
458
14
56
2.56
2.56
3.9
1.8
1.00
2.30
index
—
7
27
5
7
7.22
2.55
1.4
1.0
—
—
—
0
0
7
16
4.44
2.48
1.1
1.6
13.80
9.41
umol/l
—
7
16
50
325
1.63
2.44
1.8
1.6
—
—
—
0
0
25
132
1.96
2.42
1.7
1.6
57.73
50.53
ug/l
0.38
25
132
335
3159
1.87
2.42
12.6
9.1
27.63
27.83
u/l
0.07
325
3099
11
39
2.88
2.36
7.0
1.4
4.66
4.93
kpa
0.82
11
39
244
2160
1.40
2.32
5.3
3.8
8.73
8.08
mm/h
0.44
230
2055
39
242
1.69
2.28
1.8
1.6
—
—
—
0
0
92
696
1.43
2.23
5.2
2.8
0.10
0.26
e6/l
2.17
70
482
56
384
1.54
2.19
1.7
1.5
469.23
51541042.45
pmol/l
0.76
47
357
188
1612
1.35
2.09
5.7
4.3
6.44
6.31
mmol/l
0.28
174
1486
36
225
1.67
2.06
4.6
3.4
0.22
0.23
g/l
0.09
36
219
104
817
1.38
2.01
4.0
2.6
2.36
2.36
mmol/l
0.23
99
757
89
684
1.40
1.96
3.1
2.3
2.74
2.56
mg/l
0.42
75
602
58
413
1.48
1.91
4.6
2.8
2.13
2.46
e6/l
0.14
31
196
287
2649
1.41
1.87
13.3
8.7
93.00
94.21
ml/min/173m2
0.45
254
2362
8
28
2.90
1.87
6.8
5.0
86.38
93.61
%
—
8
28
47
324
1.52
1.81
4.9
2.1
2.58
2.47
g/l
0.80
47
305
80
612
1.39
1.80
2.8
2.7
343.39
323.09
umol/l
0.82
69
572
180
1561
1.31
1.74
4.5
3.1
0.00
0.00
estimate
-0.00
40
309
36
237
1.58
1.70
2.1
1.5
1401.76
1110.63
nmol/l
1.24
29
189
47
329
1.49
1.69
4.9
3.3
6.84
5.87
umol/l
0.22
40
285
25
150
1.72
1.68
2.0
1.8
—
—
—
0
0
10
41
2.48
1.65
1.2
1.1
—
—
—
0
0
282
2613
1.37
1.65
4.0
3.7
—
—
—
0
0
133
1114
1.31
1.64
13.4
6.6
1.22
1.22
mmol/l
0.39
124
1053
10
42
2.42
1.63
1.0
2.4
0.00
0.00
g/l
—
10
42
149
1269
1.30
1.62
3.7
2.8
73.35
73.40
nmol/l
0.01
140
1200
10
44
2.31
1.57
1.3
1.1
—
—
—
0
0
5
15
3.36
1.53
1.0
1.8
—
—
—
0
0
7
27
2.62
1.52
1.0
1.2
—
—
—
0
0
7
27
2.62
1.52
1.0
1.2
—
—
—
0
0
99
804
1.32
1.51
4.8
3.2
0.00
0.00
estimate
0.50
37
294
179
1575
1.27
1.47
4.5
3.1
0.00
0.00
estimate
-0.00
40
304
180
1591
1.26
1.40
4.6
3.1
0.08
0.00
estimate
0.49
40
287
58
439
1.38
1.40
4.5
2.6
0.22
0.87
e6/l
3.86
30
223
261
2413
1.30
1.40
5.2
4.2
14.67
14.44
pmol/l
0.88
240
2270
7
29
2.44
1.40
1.0
1.2
—
—
—
0
0
153
1327
1.27
1.40
3.1
2.4
—
—
estimate
—
0
0
14
75
1.90
1.36
3.1
4.7
23.74
23.71
mmol/l
0.01
14
75
11
54
2.07
1.34
1.4
1.2
—
—
—
0
0
48
355
1.41
1.33
1.7
1.6
1056.10
939.23
mu/l
0.25
40
312
97
800
1.29
1.32
2.2
2.4
54.16
62.73
u/l
0.77
86
763
9
43
2.12
1.31
1.8
1.9
—
—
—
0
0
51
384
1.38
1.28
2.9
2.0
2.39
2.41
mmol/l
0.84
46
346
6
25
2.42
1.25
1.0
1.2
—
—
—
0
0
36
258
1.44
1.19
3.0
2.4
10001.80
7440.28
u/l
0.11
17
110
6
26
2.33
1.19
1.0
1.2
—
—
—
0
0
6
26
2.33
1.19
1.0
1.2
—
—
—
0
0
8
38
2.13
1.19
1.1
1.1
—
—
—
0
0
25
166
1.54
1.18
1.6
1.7
—
—
—
0
0
11
57
1.96
1.18
1.2
1.1
—
—
—
0
0
330
3179
1.46
1.17
17.4
11.4
70.73
69.45
umol/l
0.42
330
3137
17
103
1.68
1.15
1.6
1.5
—
—
—
0
0
67
538
1.30
1.11
1.4
1.3
3.26
7.85
u/ml
1.41
24
227
13
74
1.79
1.08
1.5
1.1
—
—
—
0
0
318
3053
1.36
1.06
15.8
10.0
21.42
19.59
mg/l
0.48
264
2367
34
247
1.42
1.06
17.1
6.2
0.42
0.89
mmol/l
0.35
26
168
12
67
1.82
1.06
1.2
1.2
4.33
2.52
u/ml
—
6
23
10
53
1.91
1.02
1.0
2.5
—
—
—
0
0
193
1760
1.21
1.01
10.1
8.4
3.76
3.84
e9/l
0.18
178
1511
136
1200
1.21
1.00
4.1
2.8
0.00
0.00
estimate
0.50
40
262
272
2858
0.80
0.99
17.6
13.2
334.32
334.36
g/l
0.03
272
2843
308
2951
1.30
0.98
17.3
10.3
3.93
3.94
mmol/l
0.14
301
2883
72
597
1.26
0.94
1.5
1.3
26.43
25.23
iu/ml
0.04
23
177
78
653
1.25
0.94
2.6
2.0
—
—
—
0
0
6
27
2.24
0.94
1.0
1.2
—
—
—
0
0
17
110
1.57
0.92
2.0
1.6
243.89
198.87
u/ml
—
9
61
10
56
1.81
0.88
1.0
1.2
106.90
114.67
%
—
10
51
105
914
1.21
0.87
3.5
2.5
0.00
0.00
estimate
0.50
38
256
12
72
1.69
0.86
1.1
1.0
—
—
—
0
0
15
96
1.59
0.85
2.1
1.5
144.60
119.47
au/ml
—
5
26
22
154
1.46
0.85
1.1
1.2
—
—
—
0
0
10
57
1.78
0.84
1.5
1.2
—
—
—
0
0
6
32
1.89
0.82
1.2
1.4
—
285.71
—
0
7
68
570
1.24
0.81
1.6
1.6
—
—
—
0
0
235
2211
1.18
0.78
4.1
3.3
37.68
39.38
u/l
0.22
222
2143
15
99
1.54
0.77
2.1
1.5
—
—
—
0
0
48
391
1.26
0.74
9.7
4.3
0.81
0.82
mmol/l
0.30
43
375
176
1623
1.17
0.73
3.8
3.0
117.74
81.50
ug/l
0.66
165
1566
136
1230
1.17
0.73
13.3
6.4
1.22
1.22
mmol/l
0.33
114
1089
7
40
1.76
0.71
1.7
1.2
—
—
—
0
0
5
26
1.94
0.71
1.0
1.6
134.70
193.66
pmol/l
—
5
26
26
196
1.35
0.70
2.1
2.4
70.11
81.40
ml/min/173m2
—
9
82
7
42
1.68
0.68
4.7
2.4
13.41
6.42
pmol/l
—
7
42
110
983
1.17
0.68
1.5
1.5
2.74
2.04
u/ml
0.13
29
264
72
620
1.20
0.68
1.7
1.5
21.03
20.89
nmol/l
0.03
65
565
290
2793
1.20
0.66
5.9
4.9
1.71
1.79
mu/l
0.68
275
2669
16
113
1.44
0.62
1.3
1.5
—
—
—
0
0
5
30
1.68
0.61
4.6
3.4
14.00
20.83
u/ml
—
5
30
29
229
1.29
0.59
17.7
5.7
24.20
23.80
mmol/l
0.38
29
229
13
89
1.48
0.58
1.4
1.3
—
—
—
0
0
111
1006
1.15
0.57
1.9
1.8
100.82
96.50
pmol/l
0.33
58
526
6
37
1.63
0.56
1.8
1.5
—
—
—
0
0
42
498
0.82
0.54
1.8
1.9
3.40
3.52
ratio
0.27
31
389
36
296
1.24
0.54
1.4
1.3
175.46
164.92
u/ml
0.04
14
117
9
62
1.46
0.53
1.3
2.0
—
—
—
0
0
16
118
1.37
0.51
1.5
1.7
15.45
6.78
u/ml
—
6
34
33
397
0.81
0.49
1.8
2.4
0.64
0.64
ug/l
0.00
11
179
25
199
1.28
0.49
1.6
1.5
55.57
60.86
ug/l
0.23
20
174
23
181
1.29
0.49
1.6
1.5
1.03
1.11
ratio
0.33
18
118
23
181
1.29
0.49
1.6
1.5
1.12
1.25
ratio
0.35
18
118
23
181
1.29
0.49
1.6
1.5
0.94
0.97
ratio
0.21
18
118
15
112
1.35
0.45
2.3
2.2
2.21
4.88
iu/l
—
9
47
72
644
1.15
0.45
4.1
3.9
9.58
7.57
mg/mmol
0.17
46
441
0
15
0.00
0.41
0.0
1.1
—
70.87
—
0
15
5
34
1.48
0.40
1.0
1.1
—
—
—
0
0
24
196
1.24
0.40
2.3
1.6
269.75
322.85
mu/l
0.50
24
180
0
18
0.00
0.40
0.0
9.7
—
56.00
—
0
6
23
187
1.25
0.40
1.3
1.3
364.85
284.29
miu/ml
—
9
108
28
233
1.22
0.40
3.6
5.7
—
—
—
0
0
5
35
1.43
0.39
1.0
1.2
—
—
—
0
0
44
502
0.86
0.39
2.1
3.1
17.50
21.66
%
—
5
151
5
36
1.39
0.38
1.0
1.1
—
—
—
0
0
5
36
1.39
0.38
1.0
1.1
—
—
—
0
0
5
36
1.39
0.38
1.2
1.4
—
—
—
0
0
55
489
1.15
0.38
1.7
2.2
—
—
—
0
0
50
442
1.15
0.37
3.8
3.5
974.83
515.00
ng/l
0.50
42
357
33
383
0.85
0.36
1.6
1.7
3.48
3.45
mmol/l
0.04
22
275
6
41
1.47
0.36
1.3
1.9
—
—
—
0
0
47
415
1.15
0.36
1.5
2.1
—
—
—
0
0
5
77
0.64
0.36
1.2
1.1
—
40.76
—
0
17
126
1182
1.10
0.36
2.1
1.9
1.42
1.38
mmol/l
0.22
112
1081
30
257
1.18
0.33
1.0
1.0
—
—
—
0
0
288
2818
1.11
0.31
4.5
4.2
4.63
4.72
mmol/l
1.03
274
2716
7
54
1.30
0.30
1.3
1.2
—
—
—
0
0
14
111
1.27
0.30
3.6
4.1
0.69
0.64
%
0.14
14
111
33
288
1.16
0.30
8.2
5.8
103.24
104.99
mmol/l
1.02
33
288
78
725
1.10
0.27
2.2
2.3
—
—
—
0
0
8
65
1.24
0.27
1.4
2.0
—
—
—
0
0
21
178
1.19
0.27
1.7
1.4
—
—
—
0
0
10
127
0.78
0.26
1.3
1.4
—
—
—
0
0
18
151
1.20
0.25
1.0
1.1
1.35
5.72
u/ml
2.86
13
104
10
78
1.29
0.24
2.0
1.5
—
—
—
0
0
5
38
1.32
0.23
1.0
1.2
—
—
—
0
0
5
38
1.32
0.23
1.2
1.0
19.94
19.08
mmol/l
—
5
38
19
221
0.85
0.23
1.3
1.3
—
—
—
0
0
5
39
1.29
0.23
1.0
1.1
—
—
—
0
0
46
421
1.11
0.22
2.1
2.9
660.81
372.23
ng/l
0.27
26
248
10
124
0.80
0.22
18.5
10.7
0.71
0.70
%
—
10
124
0
10
0.00
0.21
0.0
2.7
—
50.90
—
0
10
0
12
0.00
0.21
0.0
1.2
—
—
—
0
0
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
0
14
0.00
0.20
0.0
2.2
—
—
—
0
0
20
174
1.16
0.20
1.1
1.2
10.40
3.82
u/ml
0.41
13
115
6
49
1.23
0.20
1.2
1.2
—
—
—
0
0
6
49
1.23
0.20
1.2
1.2
—
—
—
0
0
6
51
1.18
0.19
3.3
5.6
297.33
381.30
umol/l
—
6
46
14
164
0.85
0.18
2.4
1.9
—
—
—
0
0
345
3426
1.17
0.18
22.9
15.9
4.59
4.62
e12/l
0.68
338
3358
12
101
1.19
0.17
1.0
1.1
0.03
0.23
u/ml
—
6
42
11
130
0.84
0.16
16.9
10.3
1.68
1.36
%
0.50
11
130
277
2806
0.94
0.15
4.4
4.1
1.42
1.44
mmol/l
0.52
264
2697
7
88
0.79
0.14
1.1
1.2
—
—
—
0
0
7
89
0.78
0.14
1.1
1.2
—
—
—
0
0
7
89
0.78
0.14
5.4
3.0
53.71
55.90
%
—
7
89
82
785
1.06
0.14
2.5
2.4
—
—
—
0
0
11
128
0.85
0.13
17.4
10.5
91.67
94.49
%
0.47
11
128
20
180
1.12
0.13
2.4
1.6
0.24
0.32
mg/l
—
10
90
22
241
0.91
0.12
1.9
1.4
—
—
—
0
0
23
210
1.10
0.12
1.5
1.5
—
—
—
0
0
28
259
1.09
0.12
1.6
1.5
28.44
21.38
iu/l
0.37
21
207
17
188
0.90
0.11
2.4
2.1
0.06
0.13
e6/l
0.49
17
177
269
2660
1.04
0.11
3.7
3.6
1.34
1.27
mmol/l
0.71
255
2535
18
163
1.11
0.11
1.2
1.6
3.73
3.61
mg/l
0.04
13
112
285
2825
1.04
0.09
4.8
4.5
2.78
2.83
mmol/l
0.52
270
2712
60
623
0.96
0.09
2.8
3.2
1.09
1.38
ug/l
0.49
55
583
7
85
0.82
0.07
2.7
1.9
—
—
—
0
0
16
148
1.08
0.06
1.0
1.1
0.61
1.86
u/ml
—
9
98
14
129
1.09
0.05
1.3
1.3
—
—
—
0
0
13
139
0.93
0.03
2.3
1.7
—
—
—
0
0
266
2669
0.99
0.01
3.9
3.8
5.73
5.69
mmol/l
0.18
248
2514
257
2578
0.99
0.01
5.1
4.6
37.54
37.47
mmol/mol
0.04
244
2484
18
174
1.04
0.00
1.1
1.1
0.78
0.87
g/l
1.27
18
174
73
729
1.00
0.00
4.5
3.0
1.02
1.02
kg/l
0.37
45
465
17
173
0.98
0.00
1.0
1.1
1.51
1.53
g/l
0.11
17
173
50
495
1.01
0.00
1.7
1.8
1.33
1.35
%
0.10
43
463
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
2.3
—
10.72
—
0
9
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
3.8
—
4.42
—
0
6
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
9
0.00
-0.00
0.0
2.3
—
4.64
—
0
9
0
5
0.00
-0.00
0.0
3.6
—
5.42
—
0
5
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.2
—
25.33
—
0
6
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
1.27
—
0
5
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
5
58
0.86
-0.00
1.6
1.5
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: AB1_SCARLET_FEVER_WIDE – Scarlet fever, including avohilmo
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).