HSIL lesion of the vagina

N14_VAGINAL_HSIL

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

only females

313377

2. Check conditions

None

313377

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D07.2&, N89.1, N89.2
  • Hospital discharge: ICD-9 2333A|6230B|6230C
  • Cause of death: ICD-10 D07.2&, N89.1, N89.2
  • Cause of death: ICD-9 2333A|6230B|6230C

2 out of 7 registries used, show all original rules.

580

4. Check minimum number of events

None

580

5. Include endpoints

None

580

6. Filter based on genotype QC (FinnGen only)

526

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

First used in FinnGen datafreeze
DF7

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2714 2714 -
Only index persons 2571 2571 -
Unadjusted period prevalence (%)
Whole population 0.08 0.08 -
Only index persons 0.09 0.09 -
Median age at first event (years)
Whole population - 49.94 -
Only index persons - 48.76 -

-FinnGen-

Key figures

All Female Male
Number of individuals 526 526 -
Unadjusted period prevalence (%) 0.19 0.19 -
Median age at first event (years) 51.21 51.21 -

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
540
Matched controls
5400
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
R87.6
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal cytological findings
23.1
316.6
373
476
N89.1
ICD-10 Finland
Moderate vaginal dysplasia
+∞
307.7
298
*
LEB00
NOMESCO Finland
Biopsy of vagina
112.8
307.7
285
53
ULA02
NOMESCO Finland
Kolposcopy
41.4
307.7
429
461
LEB30
NOMESCO Finland
Destruction of lesion of vaginal mucosa
523.3
307.7
266
10
N89.2
ICD-10 Finland
Severe vaginal dysplasia, not elsewhere classified
+∞
296.0
256
*
LDA20
NOMESCO Finland
Biopsy of vaginal cervix
16.0
230.2
262
300
XLD00
NOMESCO Finland
Sytologyspecimen from mouth of uterus
13.1
209.2
330
580
8077/2-C52.9
ICD-O-3
Squamous intraepithelial neoplasia, high grade of vagina, NOS
+∞
203.4
182
*
LDC03
NOMESCO Finland
Conisation of cervix uteri using diathermy or laser
15.2
169.3
173
162
LFB00
NOMESCO Finland
Biopsy of vulva or perineum
16.6
120.4
109
81
N87.0
ICD-10 Finland
Mild cervical dysplasia
14.9
116.9
113
94
A63.0
ICD-10 Finland
Anogenital (venereal) warts
14.8
113.3
110
92
LDA10
NOMESCO Finland
Curettage of cervix uteri
9.8
105.3
142
190
N89.0
ICD-10 Finland
Mild vaginal dysplasia
187.8
104.4
106
7
N87.1
ICD-10 Finland
Moderate cervical dysplasia
14.9
101.0
96
77
R87.5
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal microbiological findings
16.2
92.4
83
60
8077/2-C53.9
ICD-O-3
Squamous intraepithelial neoplasia, high grade of cervix uteri
18.1
88.0
74
47
N87.2
ICD-10 Finland
Severe cervical dysplasia, not elsewhere classified
13.3
85.8
87
77
LDB20
NOMESCO Finland
Electrocoagulation or laser therapy of cervix uteri
21.2
67.5
52
27
ZXC10
NOMESCO Finland
Use of laser
11.1
44.6
49
48
N90.1
ICD-10 Finland
Moderate vulvar dysplasia
233.1
42.5
43
*
LFB10
NOMESCO Finland
Excision of lesion of vulva or perineum
15.2
36.8
33
23
N90.2
ICD-10 Finland
Severe vulvar dysplasia, not elsewhere classified
64.9
36.7
42
7
LFB20
NOMESCO Finland
Destruction of lesion of vulva or perineum
33.1
30.8
40
13
LEB10
NOMESCO Finland
Excision of lesion of vagina
32.2
29.9
39
13
LC2BE
NOMESCO Finland
Transvaginal ultrasound examination of uterus, parametria and lower abdomen
2.6
25.3
286
1650
D06BB10
ATC
imiquimod; topical
4.3
22.4
61
154
N90.0
ICD-10 Finland
Mild vulvar dysplasia
38.9
21.0
26
7
D07.2
ICD-10 Finland
Carcinoma in situ: Vagina
+∞
19.9
19
*
8077/2-C51.9
ICD-O-3
Squamous intraepithelial neoplasia, high grade of vulva, NOS
38.1
17.7
22
6
6230B
ICD-9 Finland
Noninflammatory disorders of vagina, Dysplasia of vagina[DYSPLASIA VAGINAE MODERATA]
+∞
16.8
16
*
G03CA03
ATC
estradiol; nasal, systemic, rectal, transdermal, vaginal
2.2
14.0
395
3011
L04AA06
ATC
mycophenolic acid; systemic
6.7
13.7
22
34
L04AX01
ATC
azathioprine; systemic
3.8
12.1
38
106
N87.9
ICD-10 Finland
Dysplasia of cervix uteri, unspecified
23.9
10.3
14
6
0781C
ICD-9 Finland
Other diseases due to viruses and Chlamydiae, Viral warts[CONDYLOMA ACCUMINATUM]
14.9
10.1
16
11
LEC00
NOMESCO Finland
Partial excision of vagina
56.0
9.7
11
*
LX1AE
NOMESCO Finland
Gynecological ultrasound examination as part of clinical examination
2.1
9.3
104
557
A12AX
ATC
Calcium, combinations with vitamin D and/or other drugs
1.8
9.1
223
1539
D06BB04
ATC
podophyllotoxin; topical
2.9
9.0
42
151
A63.8
ICD-10 Finland
Other specified predominantly sexually transmitted diseases
24.5
8.9
12
5
6230C
ICD-9 Finland
Noninflammatory disorders of vagina, Dysplasia of vagina[DYSPLASIA VAGINAE GRAVIS]
+∞
8.4
8
*
Z09.0
ICD-10 Finland
Follow-up examination after surgery for other conditions
2.3
8.2
67
316
NF1AE
NOMESCO Finland
Hip joint ultrasound examination
4.0
8.2
23
59
XXA00
NOMESCO Finland
Clinical examination requiring general anaesthesia
33.9
8.1
10
*
8325
FHL
Coagulation, cryo or laser in anesthesia or operating room
22.4
8.0
11
5
M32.9
ICD-10 Finland
Systemic lupus erythematosus, unspecified
11.0
7.8
14
13
R87.7
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal histological findings
15.3
7.7
12
8
C52.91
ICD-10 Finland
Squamous cell carcinoma of the vagina
45.6
7.7
9
*
8070/3-C52.9
ICD-O-3
Squamous cell carcinoma, NOS, of vagina, NOS
45.6
7.7
9
*
LX1XE
NOMESCO Finland
Other gynecological ultrasound examination
3.0
7.7
33
113
D07.1
ICD-10 Finland
Carcinoma in situ: Vulva
25.4
7.6
10
*
N89.3
ICD-10 Finland
Dysplasia of vagina, unspecified
81.2
7.4
8
*
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
2.1
7.4
75
386
SAA03
NOMESCO Finland
Extended examination of mouth
1.7
7.4
240
1762
TPH15
NOMESCO Finland
Insertion of central venous catheter through external or internal jugular vein
3.0
7.2
32
112
202
Kela drug reimbursment
Connective tissue diseases, rheumatoid arthritis and comparable disease
2.1
7.1
75
392
G01AA10
ATC
clindamycin; vaginal
1.8
7.1
132
833
L01BA01
ATC
methotrexate; systemic
3.1
6.9
29
98
WZB00
NOMESCO Finland
Telephone prescription or other care instructions
1.7
6.8
185
1291
M32.1
ICD-10 Finland
Systemic lupus erythematosus with organ or system involvement
40.6
6.8
8
*
WX105
NOMESCO Finland
Surface analgesia on skin or mucosa
2.2
6.7
60
294
8326
FHL
Batch conization
12.4
6.6
11
9
DM1AA
NOMESCO Finland
Paranasal sinuses X-ray examination without contrast
3.2
6.6
26
85
L04AA01
ATC
[U] ciclosporin
6.3
6.5
16
26
NK6QA
NOMESCO Finland
Measurement of bone density from two or more locations with X-ray
2.2
6.4
54
258
N02AA59
ATC
codeine, combinations excl. psycholeptics; systemic
1.6
6.2
246
1871
GD1UA
NOMESCO Finland
Thorax X-ray examination outside radiological department
2.0
6.2
72
390

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
111
125
10.92
93.34
4.4
1.8
—
—
—
0
0
333
2223
2.30
19.16
4.1
2.1
—
—
—
0
0
92
456
2.23
10.10
1.6
1.4
—
—
—
0
0
58
255
2.43
8.35
5.7
1.7
24.91
7.51
iu/ml
1.62
24
56
299
2323
1.64
7.34
3.1
2.6
—
—
estimate
—
0
0
83
448
2.01
7.21
4.1
3.7
7.35
7.37
ph
0.24
57
302
311
2490
1.59
6.36
3.3
2.5
82.13
78.98
nmol/l
1.08
289
2275
209
1570
1.54
5.39
3.9
3.1
6.91
6.96
mmol/l
0.06
172
1314
40
184
2.27
5.24
1.6
1.2
2.64
10.93
u/ml
0.90
12
35
40
184
2.27
5.24
1.5
1.2
3.61
2.01
u/ml
0.36
11
19
264
2098
1.51
5.16
6.7
4.4
36.17
36.36
g/l
0.22
244
1983
37
166
2.32
5.13
1.9
2.3
1.39
1.52
g/l
0.33
31
147
212
1633
1.49
4.71
3.7
3.0
—
—
—
0
0
48
249
2.02
4.66
2.9
2.1
0.00
0.01
estimate
0.49
15
80
91
582
1.68
4.53
1.7
1.4
—
—
—
0
0
312
2614
1.46
4.40
9.7
6.2
1.84
1.96
e9/l
0.97
285
2326
306
2559
1.45
4.33
9.7
6.1
0.53
0.54
e9/l
0.67
274
2229
290
2404
1.45
4.28
9.4
6.2
28.66
28.96
%
0.19
278
2283
285
2355
1.45
4.28
9.5
6.2
2.72
2.74
%
0.06
270
2204
184
1399
1.48
4.27
1.7
1.6
20.56
21.48
nmol/l
0.33
159
1192
121
843
1.56
4.24
1.8
1.6
—
—
—
0
0
286
2368
1.44
4.23
9.2
6.1
56.92
56.81
%
0.06
275
2257
285
2359
1.44
4.21
9.6
6.3
8.43
8.46
%
0.08
270
2214
284
2352
1.44
4.17
9.6
6.2
0.68
0.71
%
0.31
267
2196
316
2670
1.44
4.15
10.0
6.5
0.17
0.18
e9/l
0.10
286
2357
84
538
1.66
4.15
1.9
1.6
—
—
—
0
0
190
1462
1.46
4.13
5.5
4.0
0.00
0.00
estimate
0.80
54
528
68
412
1.74
4.11
3.6
3.3
11.26
10.30
g/l
1.07
63
388
12
26
4.70
4.08
1.7
1.8
0.63
0.80
e9/l
0.48
12
26
159
1184
1.49
4.07
2.9
2.2
—
—
—
0
0
207
1623
1.45
4.06
9.3
6.0
—
—
—
0
0
305
2569
1.43
4.02
9.8
6.2
0.04
0.04
e9/l
0.47
273
2233
14
36
3.96
4.02
2.7
3.8
—
—
—
0
0
65
393
1.74
3.96
1.6
1.3
—
—
—
0
0
188
1457
1.45
3.89
4.0
3.2
47.67
26.44
mg/l
0.78
102
847
20
77
2.66
3.85
1.6
1.3
—
—
—
0
0
54
312
1.81
3.83
11.5
6.8
10.30
8.30
mmol/l
1.47
54
299
190
1490
1.42
3.64
4.6
3.8
10.52
5.61
mg/mmol
0.50
100
826
12
30
4.07
3.61
1.7
1.7
38.37
44.86
%
0.47
12
30
316
2710
1.40
3.58
5.3
3.9
0.00
0.02
estimate
1.08
57
531
156
1183
1.45
3.58
3.0
2.4
307.93
310.06
umol/l
0.09
143
1051
105
735
1.53
3.57
1.8
1.7
1171.41
1211.22
nmol/l
0.18
86
552
419
3782
1.48
3.55
11.6
7.7
75.76
77.46
u/l
0.42
408
3578
64
399
1.69
3.50
4.7
3.0
121.12
75.37
ng/l
2.18
56
357
13
42
3.15
3.39
1.6
1.4
13808.75
169476.04
e6/l
—
8
28
75
492
1.61
3.37
2.7
2.1
0.00
0.05
estimate
0.78
15
101
288
2447
1.38
3.36
9.6
6.1
1.22
1.22
mmol/l
0.03
250
2091
54
325
1.74
3.36
2.0
1.8
1.42
1.36
g/l
0.08
49
302
8
14
5.78
3.35
3.6
3.1
0.60
0.61
mmol/l
—
8
14
239
1976
1.38
3.28
14.7
10.9
1.18
1.14
inr
0.63
197
1621
331
2895
1.37
3.13
12.9
9.4
3.93
3.96
e9/l
0.10
297
2546
209
1705
1.37
3.06
3.8
3.4
20.21
67.04
ng/l
0.67
120
1067
315
2739
1.36
3.06
5.8
4.4
6.46
6.43
mmol/l
0.11
302
2581
52
321
1.69
2.97
3.2
2.8
68.42
75.34
e9/l
0.74
39
231
53
330
1.67
2.94
12.0
7.7
—
—
—
0
0
13
46
2.87
2.93
1.5
1.3
—
—
—
0
0
171
1362
1.37
2.88
1.4
1.3
1.48
1.74
u/ml
0.11
48
385
6
9
6.73
2.87
1.0
1.2
—
—
—
0
0
256
2172
1.34
2.85
8.1
5.4
1.22
1.22
mmol/l
0.10
237
1992
309
2696
1.34
2.84
5.3
3.9
0.00
5.44
estimate
0.80
59
557
303
2641
1.34
2.78
3.4
3.2
98.77
82.47
ug/l
1.10
286
2481
18
78
2.35
2.77
3.2
2.5
31.33
30.57
umol/l
0.06
18
70
65
433
1.57
2.76
3.9
2.8
1.96
1.90
%
0.20
56
390
5
6
8.40
2.75
1.6
1.0
—
—
—
0
0
376
3389
1.36
2.73
6.4
4.6
—
3.43
—
0
6
12
40
3.04
2.71
1.5
1.1
—
—
—
0
0
59
386
1.59
2.70
7.6
7.8
96.59
96.16
%
0.49
59
380
101
742
1.44
2.69
3.1
2.4
130.24
111.01
ug/g
0.21
78
576
183
1487
1.35
2.68
2.0
2.1
125.37
174.86
u/l
0.56
174
1416
66
446
1.55
2.64
2.7
2.7
22.23
44.64
u/ml
1.32
61
427
194
1595
1.34
2.62
2.9
2.2
—
—
—
0
0
112
844
1.41
2.60
1.9
1.4
680.00
581.57
titre
0.21
32
204
155
1235
1.36
2.57
3.3
3.0
817.02
906.56
ng/l
0.25
127
1034
252
2160
1.31
2.51
2.2
2.1
104.24
98.87
pmol/l
0.70
132
1073
215
1804
1.32
2.50
3.8
3.4
2.37
2.36
mmol/l
0.65
189
1652
8
21
3.85
2.47
4.9
3.5
0.63
0.86
index
—
8
21
64
438
1.52
2.43
7.5
7.5
1.35
1.13
mmol/l
0.14
52
374
88
643
1.44
2.42
3.4
3.4
4.42
4.74
e9/l
0.24
74
575
19
90
2.15
2.41
1.6
1.4
—
—
—
0
0
28
154
1.86
2.39
1.6
1.2
51.55
59.74
u/ml
—
6
17
125
974
1.37
2.37
2.2
1.8
—
—
—
0
0
146
1167
1.34
2.35
1.7
1.6
2.13
2.23
g/l
0.36
96
731
16
72
2.26
2.29
1.3
1.2
—
—
—
0
0
301
2667
1.29
2.25
5.3
3.9
0.00
0.00
estimate
0.50
57
541
158
1287
1.32
2.22
3.2
2.3
2.67
2.84
mg/l
0.44
143
1107
145
1167
1.33
2.22
5.5
3.9
1.02
2.32
kg/l
0.50
104
776
61
422
1.50
2.21
1.3
1.3
109.48
132.67
u/ml
0.26
56
397
129
1023
1.34
2.18
3.5
2.6
8.60
8.17
e6/l
0.07
116
940
14
61
2.33
2.16
1.1
1.2
—
—
—
0
0
249
2163
1.28
2.14
4.7
3.5
6.36
6.23
ph
0.94
135
1247
63
443
1.48
2.12
7.6
7.5
7.43
7.41
ph
0.70
39
253
8
25
3.23
2.10
1.5
1.9
175.50
202.12
e6/l
—
8
25
13
56
2.35
2.06
1.8
1.7
5.02
73.28
u/ml
0.51
13
56
75
550
1.42
2.03
5.4
2.3
7.58
6.18
umol/l
0.26
70
477
95
726
1.37
2.03
3.8
2.3
2.24
2.43
g/l
2.59
90
671
20
104
1.96
2.03
1.1
1.1
28.94
21.23
au/ml
—
5
32
9
33
2.76
1.94
1.0
1.0
—
—
—
0
0
20
107
1.90
1.88
1.5
1.2
—
—
—
0
0
182
1541
1.27
1.87
7.7
6.1
—
—
—
0
0
87
665
1.37
1.86
3.8
2.3
26.05
22.26
%
1.19
82
619
5
12
4.19
1.82
1.0
1.0
—
—
—
0
0
90
695
1.35
1.81
1.3
1.3
—
—
—
0
0
146
1208
1.29
1.80
1.7
1.7
1.18
1.00
mg/l
0.41
120
937
8
29
2.78
1.79
1.0
1.2
—
—
—
0
0
6
18
3.36
1.75
2.0
2.3
1.24
1.19
nmol/l
—
6
12
7
24
2.94
1.72
1.6
1.6
141.43
144.63
nmol/l
—
7
24
59
431
1.41
1.66
5.9
4.8
0.04
0.20
%
0.90
24
96
123
1007
1.29
1.64
3.0
2.6
2.46
2.44
mmol/l
0.48
106
914
174
1489
1.25
1.60
4.6
3.1
21.66
42.72
e6/l
1.57
138
1111
8
32
2.52
1.60
1.4
1.2
—
—
—
0
0
8
32
2.52
1.60
1.1
1.2
37.02
27.15
nmol/l
—
8
25
10
43
2.35
1.59
1.0
1.1
141.30
112.35
pmol/l
—
10
43
27
168
1.64
1.58
3.6
3.3
—
—
—
0
0
35
233
1.54
1.56
1.5
1.3
—
—
—
0
0
121
997
1.28
1.53
1.7
1.7
41441863.89
31161585.06
pmol/l
0.09
111
844
5
15
3.35
1.52
1.6
1.6
13.20
8.40
%
—
5
15
33
219
1.54
1.50
1.3
1.3
258.71
241.74
miu/ml
0.10
21
114
487
4692
1.39
1.47
5.4
4.9
5.75
5.77
mmol/l
0.15
452
4362
15
80
1.90
1.46
1.1
1.1
—
—
—
0
0
15
80
1.90
1.46
1.0
1.0
—
—
—
0
0
96
773
1.29
1.45
3.9
2.4
14.46
13.33
umol/l
0.57
91
722
7
28
2.52
1.45
1.1
1.1
2167.00
1753.21
miu/ml
—
7
28
6
22
2.75
1.44
1.2
1.4
5.42
5.48
mmol/l
—
6
22
82
651
1.31
1.38
2.2
1.9
—
—
—
0
0
55
411
1.38
1.38
6.5
3.0
7.38
7.38
ph
0.37
39
232
25
159
1.60
1.37
1.6
1.2
—
—
—
0
0
5
17
2.96
1.36
1.6
1.5
36.40
28.47
%
—
5
17
53
395
1.38
1.35
6.7
2.9
1.29
2.15
mmol/l
1.27
47
345
53
395
1.38
1.35
2.5
2.5
7.62
19.76
au/ml
—
5
37
150
1285
1.23
1.35
4.6
2.9
0.30
0.40
e6/l
0.54
115
914
52
388
1.38
1.32
2.7
3.9
4.84
4.58
pmol/l
0.40
47
346
56
423
1.36
1.32
5.5
4.4
0.48
0.66
%
0.47
23
112
503
4886
1.43
1.30
21.0
15.4
139.70
139.75
mmol/l
0.13
497
4786
11
55
2.02
1.28
2.5
1.3
—
—
—
0
0
23
146
1.60
1.28
3.7
2.2
1.97
1.34
mg/l
1.80
23
131
9
44
2.06
1.27
1.0
1.1
—
—
—
0
0
8
35
2.30
1.27
4.0
2.8
—
—
—
0
0
57
435
1.35
1.27
5.4
4.4
0.78
0.96
%
0.30
23
118
283
2590
1.19
1.27
8.7
6.0
9.24
10.00
umol/l
1.16
274
2456
20
123
1.65
1.25
4.5
3.1
3.55
1.99
index
0.49
11
64
503
4890
1.42
1.25
21.3
15.5
3.93
3.92
mmol/l
0.45
495
4774
496
4812
1.38
1.24
21.0
14.0
18.13
20.66
mg/l
1.20
413
3901
16
93
1.74
1.22
3.2
1.4
—
—
—
0
0
133
1139
1.22
1.20
5.5
3.8
—
—
—
0
0
65
511
1.31
1.19
2.6
2.1
377.58
376.64
nmol/l
0.01
59
487
11
57
1.95
1.17
1.1
1.1
1.79
1.46
g/l
2.56
11
51
59
459
1.32
1.17
1.2
1.2
—
—
—
0
0
187
2090
0.84
1.15
3.0
3.0
—
—
—
0
0
5
20
2.51
1.15
8.8
1.4
13.90
17.27
%
—
5
20
36
259
1.42
1.15
3.7
2.6
121.56
128.68
g/l
1.23
36
253
46
346
1.36
1.14
2.8
2.9
68.11
67.78
g/l
0.10
40
325
24
159
1.53
1.14
1.5
1.2
—
—
—
0
0
28
192
1.48
1.14
2.6
1.3
—
—
—
0
0
28
192
1.48
1.14
2.6
1.3
—
—
—
0
0
54
417
1.33
1.13
5.5
4.5
0.05
0.09
%
0.27
20
99
15
88
1.72
1.12
1.1
1.2
—
—
—
0
0
15
88
1.72
1.12
1.7
1.6
0.36
0.60
g/l
—
10
74
33
235
1.43
1.11
4.2
6.7
24.60
24.74
mmol/l
0.09
33
230
200
1791
1.19
1.11
5.5
3.7
40.52
81.35
e6/l
1.36
141
1187
28
194
1.47
1.09
2.6
1.3
—
—
—
0
0
90
747
1.25
1.09
1.1
1.2
—
—
—
0
0
39
289
1.38
1.06
2.5
2.4
—
—
—
0
0
74
603
1.26
1.05
1.6
1.3
—
—
—
0
0
23
155
1.51
1.02
2.6
1.4
—
—
—
0
0
20
132
1.53
0.98
8.2
6.4
—
—
—
0
0
510
4991
1.39
0.98
16.1
12.5
—
—
—
0
0
17
108
1.59
0.97
2.5
2.0
8.47
6.55
pmol/l
0.36
17
108
176
1576
1.17
0.97
4.3
2.4
61.95
60.06
u/l
0.09
167
1465
34
251
1.38
0.96
3.3
3.2
7.43
7.42
ph
1.03
25
213
128
1116
1.19
0.96
1.5
1.3
4.96
12.14
u/ml
1.16
49
446
167
1491
1.17
0.95
6.3
3.6
7.40
7.40
ph
0.24
126
1045
16
244
0.65
0.94
2.6
2.4
—
—
—
0
0
8
42
1.92
0.89
2.6
1.5
—
—
—
0
0
8
42
1.92
0.89
1.3
1.3
—
—
—
0
0
240
2221
1.15
0.83
14.4
10.6
0.00
0.00
e9/l
0.19
199
1832
516
5073
1.39
0.81
16.1
11.7
23.08
23.66
u/l
0.48
505
4938
0
26
0.00
0.78
0.0
1.2
—
—
—
0
0
6
34
1.77
0.76
1.0
1.2
—
—
—
0
0
73
619
1.21
0.75
1.7
1.8
—
—
—
0
0
9
54
1.68
0.75
1.8
1.4
—
—
—
0
0
26
193
1.36
0.74
2.5
1.3
—
—
—
0
0
81
695
1.19
0.74
4.7
2.7
3.41
4.54
e6/l
0.60
42
290
9
55
1.65
0.74
1.4
1.8
—
—
—
0
0
9
55
1.65
0.74
1.0
1.1
—
—
—
0
0
7
38
1.85
0.73
1.0
1.1
309.57
297.36
mg/l
—
7
33
5
25
2.01
0.73
10.0
1.4
8.04
7.85
mmol/l
—
5
25
10
60
1.68
0.72
1.6
1.5
—
—
—
0
0
10
60
1.68
0.72
1.6
1.5
—
—
—
0
0
10
60
1.68
0.72
1.6
1.5
—
—
—
0
0
10
60
1.68
0.72
1.6
1.5
—
—
—
0
0
39
310
1.28
0.71
2.7
2.3
4.67
5.03
ug/l
0.05
31
279
20
143
1.41
0.71
1.6
2.6
25.64
24.98
mmol/l
0.44
20
143
5
26
1.93
0.71
1.0
1.5
—
—
—
0
0
22
161
1.38
0.69
2.0
1.4
253.76
305.79
ug/g
0.42
13
90
133
1196
1.15
0.69
1.4
1.4
22.89
30.29
iu/ml
0.59
39
380
20
144
1.40
0.69
1.3
1.1
—
—
—
0
0
75
644
1.19
0.69
1.6
1.3
—
—
—
0
0
499
4898
1.25
0.66
6.1
5.6
2.80
2.85
mmol/l
0.60
467
4588
29
224
1.31
0.66
1.9
1.8
—
—
—
0
0
219
2040
1.12
0.65
5.3
3.7
0.00
0.03
estimate
1.91
46
439
16
112
1.44
0.64
4.1
3.8
1.46
2.49
ratio
—
10
60
13
87
1.51
0.64
1.4
1.5
—
—
—
0
0
24
182
1.33
0.62
2.9
1.3
—
—
—
0
0
5
30
1.67
0.61
1.0
1.2
—
—
—
0
0
99
880
1.15
0.61
4.1
2.7
476.23
493.58
mosm/kgh2o
0.35
87
778
26
201
1.31
0.60
1.2
1.4
184.88
148.57
pmol/l
0.11
26
196
21
157
1.35
0.60
1.7
1.2
—
—
—
0
0
528
5226
1.46
0.60
30.2
21.8
265.17
265.31
e9/l
0.02
522
5137
494
4851
1.22
0.60
5.4
4.9
4.78
4.87
mmol/l
1.22
465
4562
8
53
1.52
0.58
1.6
1.4
32.25
32.13
pg
—
8
53
0
23
0.00
0.58
0.0
1.7
—
79.17
—
0
23
63
542
1.18
0.58
1.7
1.6
—
—
—
0
0
44
366
1.22
0.57
3.6
2.3
0.15
0.78
e6/l
1.33
39
343
8
54
1.49
0.57
1.8
1.9
14.74
23.37
ng/l
—
8
54
528
5228
1.45
0.57
30.2
21.8
4.37
4.42
e12/l
1.66
521
5122
528
5228
1.45
0.57
30.2
21.8
6.62
6.56
e9/l
0.27
522
5117
356
3428
1.11
0.55
3.9
3.2
56.18
42.11
u/l
0.87
341
3254
16
116
1.39
0.55
1.9
2.4
—
—
—
0
0
528
5230
1.43
0.54
30.4
21.9
131.68
132.50
g/l
0.83
523
5182
9
61
1.48
0.54
1.2
1.2
—
—
—
0
0
23
178
1.31
0.54
1.3
1.6
—
—
—
0
0
37
307
1.22
0.51
1.4
1.2
—
—
—
0
0
12
84
1.44
0.49
5.9
4.1
131.23
2990.94
u/ml
0.49
12
79
468
4589
1.15
0.49
4.4
4.1
1.29
1.23
mmol/l
0.99
428
4255
149
1380
1.11
0.49
1.4
1.5
—
—
—
0
0
14
102
1.38
0.47
2.2
1.8
5.83
4.81
mmol/24h
0.66
14
89
10
141
0.70
0.45
1.7
1.3
—
—
—
0
0
7
50
1.41
0.45
1.0
1.1
—
—
—
0
0
17
219
0.77
0.44
1.1
1.1
1.54
1.64
g/l
1.20
17
219
35
294
1.20
0.44
1.1
1.1
—
201.67
—
0
6
5
31
1.62
0.43
1.2
1.3
3.68
6.56
ug/l
—
5
25
5
33
1.52
0.41
1.0
1.6
127.68
29.95
ug/l
—
5
33
11
79
1.40
0.41
5.4
3.6
41.08
40.87
u/ml
0.00
11
79
18
225
0.79
0.38
1.1
1.3
—
—
—
0
0
17
134
1.28
0.37
4.1
1.6
—
—
—
0
0
30
254
1.19
0.36
1.9
2.0
1713.12
2999.72
u/l
—
10
105
185
1756
1.08
0.36
4.7
3.0
30.82
28.28
u/l
0.59
178
1668
17
211
0.80
0.35
1.4
1.7
258.06
305.83
mu/l
0.80
17
189
72
654
1.12
0.35
1.5
1.4
—
—
—
0
0
134
1257
1.09
0.34
7.0
4.6
—
—
—
0
0
6
46
1.31
0.33
1.0
1.0
228.50
209.57
mg/l
—
6
40
489
4834
1.12
0.30
5.3
4.8
1.55
1.59
mmol/l
1.29
455
4525
7
56
1.25
0.29
1.7
2.4
—
—
—
0
0
58
527
1.11
0.29
1.3
1.3
—
—
—
0
0
10
76
1.32
0.28
2.4
3.5
3.32
3.36
mmol/l
—
5
53
18
149
1.22
0.28
3.3
3.0
132.17
247.14
mg/l
—
6
42
51
462
1.11
0.27
4.5
2.3
35.14
36.82
u/l
0.13
42
381
10
128
0.78
0.27
1.1
1.0
—
—
—
0
0
426
4194
1.07
0.26
5.5
5.0
14.56
14.57
pmol/l
0.03
397
3912
9
72
1.25
0.25
1.1
1.1
—
—
—
0
0
22
189
1.17
0.24
1.3
1.5
0.17
0.32
mg/l
—
8
80
10
78
1.29
0.24
2.5
2.6
79.02
35.53
ug/min
—
5
52
12
97
1.24
0.23
1.1
1.0
0.79
2.01
u/ml
—
5
46
5
39
1.28
0.23
1.4
12.9
9.22
6.87
mmol/l
—
5
31
5
41
1.22
0.22
1.0
1.9
—
—
—
0
0
475
4703
1.08
0.21
6.7
6.2
1.79
1.82
mu/l
0.27
449
4426
0
11
0.00
0.21
0.0
1.3
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
0.02
—
0
11
0
10
0.00
0.21
0.0
1.5
—
65.50
—
0
10
0
12
0.00
0.21
0.0
1.0
—
6.68
—
0
12
0
13
0.00
0.21
0.0
1.0
—
—
—
0
0
6
48
1.25
0.20
2.3
3.1
—
—
—
0
0
6
49
1.23
0.20
1.0
1.0
35.17
30.14
mg/l
—
6
41
6
52
1.16
0.19
1.5
1.0
—
—
—
0
0
56
523
1.08
0.18
1.3
1.5
—
—
—
0
0
24
268
0.89
0.17
1.2
1.6
1578.47
1011.21
mu/l
0.91
15
214
5
68
0.73
0.17
1.2
1.7
—
—
—
0
0
15
130
1.16
0.15
2.9
3.0
60.00
58.70
%
0.14
15
130
461
4571
1.06
0.15
6.5
5.8
38.09
38.34
mmol/mol
0.28
432
4304
224
2189
1.04
0.15
2.2
1.9
1.36
1.33
mmol/l
0.21
183
1889
9
82
1.10
0.15
1.0
1.3
—
—
—
0
0
7
87
0.80
0.14
2.1
2.3
15.94
16.28
%
—
7
87
11
93
1.19
0.14
1.0
1.1
3.52
2.04
eliau/ml
—
5
49
11
94
1.17
0.13
2.0
2.9
—
—
—
0
0
23
252
0.91
0.13
1.0
1.1
—
—
—
0
0
10
85
1.18
0.12
3.1
2.0
—
—
—
0
0
15
167
0.90
0.11
1.4
1.6
46.83
57.41
ug/l
—
10
134
47
494
0.95
0.10
1.3
1.2
108.44
154.21
u/ml
0.56
18
222
44
419
1.05
0.09
1.3
1.3
—
—
—
0
0
12
134
0.89
0.09
1.3
1.4
1.26
1.28
mm
—
6
95
87
845
1.04
0.08
4.4
3.6
181.71
229.19
ng/l
0.14
60
587
6
58
1.03
0.08
2.0
2.1
—
—
—
0
0
39
409
0.95
0.08
2.1
1.8
—
—
—
0
0
43
412
1.05
0.07
2.3
2.3
6.12
6.17
ph
0.13
26
262
21
224
0.93
0.07
1.5
1.2
0.87
0.89
g/l
0.19
21
224
9
102
0.88
0.06
3.8
3.0
3.89
4.32
e9/l
—
9
102
13
140
0.93
0.04
1.3
1.5
—
—
—
0
0
148
1498
0.98
0.04
4.2
3.3
0.00
0.02
estimate
1.15
44
443
12
112
1.07
0.03
1.2
1.1
—
—
—
0
0
12
112
1.07
0.03
1.2
1.1
—
—
—
0
0
49
480
1.02
0.02
4.6
4.1
2.39
10.12
ug/l
4.05
39
384
14
148
0.94
0.02
1.4
1.3
1093.29
467.15
mg/l
0.56
14
139
12
127
0.94
0.01
1.2
1.1
0.33
1.64
u/ml
—
5
68
13
135
0.96
0.00
1.3
1.5
—
—
—
0
0
11
106
1.04
0.00
1.8
2.6
7.91
8.02
kpa
0.07
11
106
46
455
1.01
0.00
1.4
1.3
30.80
29.65
iu/l
0.08
41
399
41
406
1.01
0.00
5.3
3.6
—
—
—
0
0
12
118
1.02
0.00
1.5
1.5
—
—
—
0
0
29
287
1.01
0.00
1.2
1.1
—
—
—
0
0
39
388
1.01
0.00
4.3
3.6
1.24
1.24
mmol/l
0.12
34
337
48
479
1.00
0.00
1.6
1.8
3.44
3.46
mmol/l
0.03
30
342
7
72
0.97
0.00
3.9
7.9
312.71
389.84
umol/l
—
7
67
6
67
0.89
-0.00
1.0
1.1
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.9
—
0.37
—
0
7
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
5
54
0.93
-0.00
3.6
3.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
9
90
1.00
-0.00
1.0
1.1
—
—
—
0
0
6
67
0.89
-0.00
1.0
1.3
72.57
52.24
mu/l
—
6
62
0
7
0.00
-0.00
0.0
1.0
—
54.86
—
0
7
0
5
0.00
-0.00
0.0
2.8
—
6.96
—
0
5
0
5
0.00
-0.00
0.0
5.4
—
5.10
—
0
5
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
7
0.00
-0.00
0.0
4.6
—
—
—
0
0
7
78
0.90
-0.00
2.4
2.5
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
4.52
—
0
7
0
8
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.3
—
1.57
—
0
7
0
6
0.00
-0.00
0.0
5.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
5.0
—
24.66
—
0
5
0
6
0.00
-0.00
0.0
1.2
—
16.68
—
0
6
0
6
0.00
-0.00
0.0
1.0
—
33.93
—
0
6

Mortality – FinRegistry

Association

Association between endpoint N14_VAGINAL_HSIL and mortality.

Females

Parameter HR [95% CI] p-value
N14_VAGINAL_HSIL 1.265 [1.08, 1.48] 0.003
Birth year 0.998 [0.99, 1.01] 0.566

During the follow-up period (1.1.1998 — 31.12.2019), 266 out of 2226 females with N14_VAGINAL_HSIL died.

Males

No data

Mortality risk

Mortality risk for people of age

years, who have N14_VAGINAL_HSIL.

N-year risk Females Males
1 0.089% No data
5 0.774% No data
10 1.998% No data
15 3.721% No data
20 6.738% No data

Relationships between endpoints

Index endpoint: N14_VAGINAL_HSIL – HSIL lesion of the vagina

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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