Abscess of lung

J10_ABSCLUNGPNEUMO

Lung Abscess: Solitary or multiple collections of PUS within the lung parenchyma as a result of infection by bacteria, protozoa, or other agents.

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Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 J85.1, J85.2
  • Hospital discharge: ICD-9 5130
  • Hospital discharge: ICD-8 51399
  • Cause of death: ICD-10 J85.1, J85.2
  • Cause of death: ICD-9 5130
  • Cause of death: ICD-8 51399

2 out of 7 registries used, show all original rules.

671

4. Check minimum number of events

None

671

5. Include endpoints

None

671

6. Filter based on genotype QC (FinnGen only)

590

Control definitions (FinnGen only)

Control exclude
J10_NECROTIC

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 5076 1557 3417
Only index persons 3512 1180 2332
Unadjusted period prevalence (%)
Whole population 0.08 0.04 0.10
Only index persons 0.07 0.04 0.09
Median age at first event (years)
Whole population 60.33 62.79 59.15
Only index persons 58.66 60.67 57.65

-FinnGen-

Key figures

All Female Male
Number of individuals 590 184 406
Unadjusted period prevalence (%) 0.15 0.07 0.19
Median age at first event (years) 62.36 61.45 62.77

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
613
Matched controls
6130
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
J85.1
ICD-10 Finland
Abscess of lung with pneumonia
+∞
307.7
327
*
J85.2
ICD-10 Finland
Abscess of lung without pneumonia
+∞
300.5
263
*
J18.9
ICD-10 Finland
Pneumonia, unspecified
8.1
146.0
411
1230
GD1BD
NOMESCO Finland
Thorax extensive CT-examination
12.1
134.5
153
164
UGC12
NOMESCO Finland
Flexible bronchoscopy
9.5
133.9
194
286
J01MA14
ATC
moxifloxacin; systemic
9.1
126.7
189
287
GD1AD
NOMESCO Finland
Thorax CT examination
10.1
119.6
157
203
R91
ICD-10 Finland
Abnormal findings on diagnostic imaging of lung
7.5
111.2
202
378
J86.9
ICD-10 Finland
Pyothorax without fistula
+∞
109.8
102
*
J15.9
ICD-10 Finland
Bacterial pneumonia, unspecified
6.4
84.5
173
357
J01FF01
ATC
clindamycin; systemic
4.5
73.5
300
1083
J01MA12
ATC
levofloxacin; systemic
4.2
59.4
223
739
GD1UA
NOMESCO Finland
Thorax X-ray examination outside radiological department
4.2
59.3
219
717
GA1AE
NOMESCO Finland
Ultrasound examination of thorax
11.2
57.3
63
62
GD1PA
NOMESCO Finland
X-ray examination of the lungs in one projection
4.7
54.9
152
398
GD1AA
NOMESCO Finland
Thorax X-ray examination
3.5
47.9
415
2281
GAA10
NOMESCO Finland
Intercostal insertion of pleural drainage tube
12.6
47.7
48
41
J44.8
ICD-10 Finland
Other specified chronic obstructive pulmonary disease
4.1
46.7
157
472
GA4YT
NOMESCO Finland
Puncture of pleura with ultrasound guidance
6.8
37.6
62
100
J44.0
ICD-10 Finland
Chronic obstructive pulmonary disease with acute lower respiratory infection
5.4
37.4
80
166
GD5BD
NOMESCO Finland
Thorax and upper abdomen combined extensive CT examination of
10.6
36.6
41
41
GD5AD
NOMESCO Finland
Thorax and upper abdomen combined CT examination of
11.5
33.2
35
32
TGC00
NOMESCO Finland
Bronchial lavation
6.6
32.8
55
90
51399
ICD-8 Finland
Abscess of lung
+∞
32.6
31
*
A49.9
ICD-10 Finland
Bacterial infection, unspecified
3.4
31.9
135
465
J90
ICD-10 Finland
Pleural effusion, not elsewhere classified
6.0
31.8
59
107
GD1QA
NOMESCO Finland
Supine thorax X-ray examination
3.0
31.3
185
775
JN4BD
NOMESCO Finland
Extensive body CT
3.6
30.8
117
375
R03BB04
ATC
tiotropium bromide; inhalant
3.5
30.3
125
423
N02AA05
ATC
oxycodone; systemic
2.8
27.2
179
788
5130A
ICD-9 Finland
Abscess of lung and mediastinum, Abscess of lung
+∞
26.2
25
*
Z2446
NOMESCO Finland
Social worker
4.0
24.8
77
214
ZXD05
NOMESCO Finland
Urgent procedure
2.5
24.6
233
1216
JN4AD
NOMESCO Finland
Body CT examination
3.1
23.9
117
435
GD1DD
NOMESCO Finland
High resolution CT examination of lungs
4.3
23.0
63
159
TPH15
NOMESCO Finland
Insertion of central venous catheter through external or internal jugular vein
3.9
22.2
70
196
GD1CT
NOMESCO Finland
Biopsy of the lung with CT guidance
8.0
21.8
30
39
D38.1
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Trachea, bronchus and lung
5.1
21.6
47
98
J43.9
ICD-10 Finland
Emphysema, unspecified
6.9
21.5
34
52
EBA15
NOMESCO Finland
Extraction of multiple teeth
4.5
21.1
53
125
ZXE03
NOMESCO Finland
Procedure duration 20 to 29 minutes
4.0
21.0
63
170
F10.1
ICD-10 Finland
Mental and behavioural disorders due to use of alcohol, Harmful use
3.4
20.8
80
256
A41.9
ICD-10 Finland
Sepsis, unspecified
4.6
20.3
50
116
J44
ICD-10 Finland
Other chronic obstructive pulmonary disease
6.7
20.3
33
52
WX302
NOMESCO Finland
Thoracal epidural anesthesy
4.2
20.1
56
143
TPH04
NOMESCO Finland
Cathetrisation of vein
2.4
20.1
182
917
WX892
NOMESCO Finland
Monitored bed care
3.3
19.9
82
274
R56.8
ICD-10 Finland
Other and unspecified convulsions
4.1
19.8
57
149
203
Kela drug reimbursment
Chronic asthma and similar chronic obstructive pulmonary diseases
2.5
19.3
159
766
GA4AT
NOMESCO Finland
Cathetrisation of pleural cavity with ultrasound guidance
14.8
18.8
31
22
H02AB06
ATC
prednisolone; systemic
2.1
18.5
331
2180
GDC00
NOMESCO Finland
Lobectomy of lung
31.1
18.5
24
8
WX408
NOMESCO Finland
General anesthesy, balanced
2.3
18.3
191
1017
R04.2
ICD-10 Finland
Haemoptysis
4.4
18.3
48
117
J44.9
ICD-10 Finland
Chronic obstructive pulmonary disease, unspecified
3.6
18.2
64
193
WX730
NOMESCO Finland
Conventional respirator
7.6
17.5
25
34
J01CR02
ATC
amoxicillin and beta-lactamase inhibitor; systemic
2.1
17.4
342
2313
ZXE04
NOMESCO Finland
Procedure duration 30 to 39 minutes
3.6
17.2
60
180
ZXE05
NOMESCO Finland
Procedure duration 40 to 49 minutes
4.0
17.0
50
133
R81
ICPC
Pneumonia
4.3
16.9
45
111
J86.00
ICD-10 Finland
Empyema with broncho-pleural fistula
+∞
16.7
16
*
130
Kela drug reimbursment
Malignant tumour
2.8
16.7
90
350
R03AK06
ATC
salmeterol and fluticasone; inhalant
2.5
16.5
119
535
Z51.5
ICD-10 Finland
Palliative care
2.9
16.5
88
340
J44.1
ICD-10 Finland
Chronic obstructive pulmonary disease with acute exacerbation, unspecified
4.3
16.4
44
109
J47
ICD-10 Finland
Bronchiectasis
6.0
16.3
29
50
JN3AA
NOMESCO Finland
Abdominal X-ray examination without contrast
4.1
16.0
46
120
A28
ICPC
Limited function/disability NOS
2.3
16.0
144
715
GAC46
NOMESCO Finland
Partial decortication of pleura
87.4
15.6
17
*
R4110
NOMESCO Finland
Physiotherapy
2.1
15.6
198
1129
FB1BD
NOMESCO Finland
Extensive CT examination of arteria pulmonalis
3.1
15.5
67
230
N05AA02
ATC
levomepromazine; systemic
4.0
15.4
45
119
N05AF03
ATC
chlorprothixene; systemic
5.8
15.2
28
50
N07BB01
ATC
disulfiram; oral
3.7
15.2
49
139
DM1QA
NOMESCO Finland
Paranasal sinuses X-ray examination in one projection
3.9
15.0
45
121
N05AH03
ATC
olanzapine; systemic
3.4
14.6
56
178
N05BA01
ATC
diazepam; systemic, rectal
2.5
14.5
106
478
AA1BD
NOMESCO Finland
Extensive CT of head and brain
5.3
14.2
29
57
N05AH02
ATC
clozapine; systemic
6.0
14.1
25
43
R50.9
ICD-10 Finland
Fever, unspecified
2.3
14.1
121
587
N05AH04
ATC
quetiapine; oral
2.3
14.0
129
645
TPH07
NOMESCO Finland
Cathetrisation of artery
2.5
13.9
98
434
B44.1
ICD-10 Finland
Other pulmonary aspergillosis
54.6
13.9
16
*
WX404
NOMESCO Finland
Intravenous generell anesthesy
2.2
13.8
135
690
N03AX16
ATC
[U] pregabalin
2.1
13.8
160
876
R03AK03
ATC
[U] fenoterol and ipratropium bromide
3.1
13.7
62
218
J02AC03
ATC
voriconazole; systemic
34.9
13.6
17
5
F10.25
ICD-10 Finland
Alcohol dependence continuous use
5.4
13.5
27
52
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
2.0
13.5
199
1187
R03DA04
ATC
theophylline; systemic, rectal
3.1
13.4
59
204
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
2.4
13.3
106
496
F20.00
ICD-10 Finland
Paranoid schizophrenia continuous
5.6
13.2
25
46
F17.29
ICD-10 Finland
Addiction caused by tobacco UNS
5.6
13.2
25
46
ZXE02
NOMESCO Finland
Procedure duration 10 to 19 minutes
3.4
13.0
48
149
Z3226
NOMESCO Finland
Physiotherapist
2.2
13.0
131
677
N06AX11
ATC
mirtazapine; oral
1.9
12.8
217
1355
T36
ICD-10 Finland
Poisoning by systemic antibiotics
3.7
12.8
41
116
J45.9
ICD-10 Finland
Asthma, unspecified
2.2
12.8
132
689
WX700
NOMESCO Finland
Respiratory and circulatory monitoring
2.2
12.7
123
626
N02AX02
ATC
tramadol; systemic, rectal
1.9
12.6
291
2004
112
Kela drug reimbursment
Severe psychotic and other severe mental disorders
3.0
12.5
57
201
A03
ICPC
Fever
2.2
12.5
116
579
J20.9
ICD-10 Finland
Acute bronchitis, unspecified
2.1
12.5
142
768
R03AC02
ATC
salbutamol; inhalant
1.8
12.3
336
2430
R03AL06
ATC
olodaterol and tiotropium bromide; inhalant
4.9
12.2
27
57
P15
ICPC
Chronic alcohol abuse
3.8
12.2
38
105
F10.24
ICD-10 Finland
Alcohol depence active use
5.4
12.1
24
46
WX872
NOMESCO Finland
Intensive care
3.2
12.1
50
167
N06AB04
ATC
citalopram; systemic
2.1
12.0
141
771
I26.9
ICD-10 Finland
Pulmonary embolism without mention of acute cor pulmonale
3.0
11.9
55
196
J96.1
ICD-10 Finland
Chronic respiratory failure
4.4
11.9
30
71
F20.9
ICD-10 Finland
Schizophrenia, unspecified
5.1
11.8
25
51
D64.9
ICD-10 Finland
Anaemia, unspecified
2.4
11.8
90
413
J69.0
ICD-10 Finland
Pneumonitis due to food and vomit
4.7
11.8
27
59
N05CF01
ATC
zopiclone; oral
1.9
11.6
217
1389
R95
ICPC
Chron obstructive pulmonary disease
3.9
11.6
34
90
PH2AE
NOMESCO Finland
Ultrasound examination of lower leg veins
2.4
11.6
84
376
A03FA01
ATC
metoclopramide; systemic, rectal
2.0
11.3
145
817
R03AL01
ATC
fenoterol and ipratropium bromide; inhalant
3.7
11.1
35
98
ZXE06
NOMESCO Finland
Procedure duration 50 to 59 minutes
3.3
11.1
43
138
N07BA03
ATC
varenicline; oral
3.3
10.9
43
139
ZXE10
NOMESCO Finland
More than one and less than three hours
1.8
10.9
226
1490
C03CA01
ATC
furosemide; systemic
1.8
10.8
222
1458
X69
ICD-10 Finland
Intentional self-poisoning by and exposure to other and unspecified chemicals and noxious substances
4.0
10.8
31
81
JN1AE
NOMESCO Finland
Ultrasound examination of upper part of abdomen
2.5
10.7
72
311
A41.0
ICD-10 Finland
Sepsis due to Staphylococcus aureus
4.3
10.7
28
68
ZXE00
NOMESCO Finland
One hour or less
1.8
10.7
239
1608
V03AA01, ,
ATC
5.1
10.6
22
44
N17.9
ICD-10 Finland
Acute renal failure, unspecified
3.3
10.5
41
132
GDA20
NOMESCO Finland
Excision of lesion of lung
111.9
10.4
11
*
XF400
NOMESCO Finland
ECG with 12 standard connections
2.0
10.4
122
665
R06.0
ICD-10 Finland
Dyspnoea
1.8
10.3
184
1154
GAB10
NOMESCO Finland
Antero- or postero-lateral thoracotomy
23.8
10.3
14
6
WX602
NOMESCO Finland
Repeated or continuing anesthesia shots throug a catheter
2.7
10.3
58
230
N02AB03
ATC
fentanyl; nasal, sublingual, transdermal
3.1
10.2
43
145
X59
ICD-10 Finland
Exposure to unspecified factor
2.0
10.2
132
745
J01MA02
ATC
ciprofloxacin; systemic
1.8
10.1
255
1769
TPH40
NOMESCO Finland
Insertion of a long peripheral venous catheter
11.6
10.1
18
16
K08.3
ICD-10 Finland
Retained dental root
2.6
10.1
63
263
ZXE20
NOMESCO Finland
More than three and less than five hours
2.1
10.0
103
533
EB1HA
NOMESCO Finland
Panorama tomography of teeth and jaws or similar X-ray examination
1.8
10.0
246
1694
GAC97
NOMESCO Finland
Other endoscopic operation on pleura
40.8
10.0
12
*
WW200
NOMESCO Finland
Immunization
4.3
10.0
26
63
B01AB05
ATC
enoxaparin; parenteral
1.8
9.9
198
1282
F10.39
ICD-10 Finland
Withdrawal symptoms caused by alcohol UNS
7.6
9.8
22
30
J93.1
ICD-10 Finland
Other spontaneous pneumothorax
13.7
9.7
16
12
A02BC02
ATC
pantoprazole; systemic
1.8
9.7
412
3293
3039X
ICD-9 Finland
Alcohol dependence syndrome, Other and unspecified alcohol dependence
5.4
9.7
19
36
TGA30
NOMESCO Finland
Thoracocentesis
11.6
9.6
17
15
N03AG01
ATC
valproic acid; systemic, rectal
2.9
9.5
46
168
H02AB07
ATC
prednisone; oral
2.1
9.5
95
486
N02AE01
ATC
buprenorphine; parenteral, sublingual, transdermal
2.1
9.5
98
508
N05AD01
ATC
haloperidol; systemic
3.6
9.5
31
89
N05BA02
ATC
chlordiazepoxide; systemic
3.9
9.4
28
75
J13
ICD-10 Finland
Pneumonia due to Streptococcus pneumoniae
10.9
9.3
17
16
JN3AD
NOMESCO Finland
Abdominal CT examination
2.1
9.3
92
469
N05AX12
ATC
aripiprazole; systemic
3.8
9.3
28
76
J45.1
ICD-10 Finland
Nonallergic asthma
2.6
9.2
54
218
A12AX
ATC
Calcium, combinations with vitamin D and/or other drugs
1.8
9.1
195
1284
W01
ICD-10 Finland
Fall on same level from slipping, tripping and stumbling
1.7
9.0
205
1372
J46
ICD-10 Finland
Status asthmaticus
4.3
9.0
23
55
A07AA02
ATC
nystatin; oral
3.0
9.0
41
145
M05BA04
ATC
alendronic acid; oral
2.5
8.9
56
234
J01FA06
ATC
roxithromycin; oral
1.7
8.9
238
1664
JDW98
NOMESCO Finland
Other transluminal endoscopic operation on stomach or duodenum
8.1
8.9
19
24
Z3231
NOMESCO Finland
Registered nurse
1.8
8.9
178
1148
DM1AA
NOMESCO Finland
Paranasal sinuses X-ray examination without contrast
3.5
8.9
30
88
P16
ICPC
Acute alcohol abuse
4.5
8.7
21
48
JN3BD
NOMESCO Finland
Extensive abdominal CT
2.3
8.6
70
329
R03AL09
ATC
formoterol, glycopyrronium bromide and beclometasone; inhalant
3.3
8.6
32
100
F10.29
ICD-10 Finland
Addiction caused by alcohol UNS
3.4
8.6
31
95
PG1DE
NOMESCO Finland
Other extensive ultrasound examination of artery
3.0
8.5
39
138
EE1AA
NOMESCO Finland
X-ray of upper jaw or palate
20.4
8.5
12
6
Z2221
NOMESCO Finland
Medical doctor
1.8
8.5
165
1054
WF004
NOMESCO Finland
Palliative radiotherapy
4.4
8.5
21
49
GAC96
NOMESCO Finland
Other operation on pleura
91.3
8.4
9
*
F10.26
ICD-10 Finland
Alcohol dependence periodic alcoholism
4.8
8.4
19
41
B44.0
ICD-10 Finland
Invasive pulmonary aspergillosis
+∞
8.3
8
*
GDB10
NOMESCO Finland
Wedge resection of lung
+∞
8.3
8
*
JN4CD
NOMESCO Finland
Very extensive body CT
3.1
8.3
35
118
T81.4
ICD-10 Finland
Infection following a procedure, not elsewhere classified
2.2
8.3
75
369
D50.0
ICD-10 Finland
Iron deficiency anaemia secondary to blood loss (chronic)
3.5
8.2
28
83
ZXE11
NOMESCO Finland
Procedure duration 60 to 89 minutes
2.9
8.2
38
136
FB1AD
NOMESCO Finland
CT examination of arteria pulmonalis
3.6
8.1
26
74
WZC00
NOMESCO Finland
Treatment plan or consultation
1.7
8.0
213
1478
OAB43, ,
SPAT
0.4
8.0
41
938
J18.1
ICD-10 Finland
Lobar pneumonia, unspecified
6.7
7.9
19
29
K92.0
ICD-10 Finland
Haematemesis
3.7
7.9
25
70
B18.2
ICD-10 Finland
Chronic viral hepatitis C
4.7
7.9
18
39
P19
ICPC
Drug abuse
11.0
7.8
14
13
A06AD11
ATC
lactulose; oral
1.9
7.8
107
611
X57
ICD-10 Finland
Unspecified privation
3.8
7.7
23
62
SPAT1255
SPAT
Intravenous administration of medicine
2.5
7.6
49
207
L04AA13
ATC
[U] leflunomide
4.2
7.6
20
49
F29
ICD-10 Finland
Unspecified nonorganic psychosis
3.2
7.5
30
98
WX203
NOMESCO Finland
Infraclavicular plexus blockade
4.0
7.5
21
54
AA1AD
NOMESCO Finland
CT of head and brain
1.7
7.4
184
1250
ZXE30
NOMESCO Finland
More than five and less than seven hours
2.8
7.4
36
132
TPH30
NOMESCO Finland
Insertion of central venous catheter through periferal vein
4.1
7.4
20
50
JC2AB
NOMESCO Finland
Oesophagus X-ray examination with contrast
7.0
7.3
17
25
F10.21
ICD-10 Finland
Alcohol dependence currently abstinent, but staying in restrictive environment
5.9
7.3
19
33
ZXA00
NOMESCO Finland
Right side
1.7
7.2
166
1104
N05CD07
ATC
temazepam; oral
2.0
7.2
84
454
ZX120
NOMESCO Finland
Intravenous
2.1
7.2
68
340
GAA31
NOMESCO Finland
Thoracoscopy
30.4
7.2
9
*
R03AL02
ATC
salbutamol and ipratropium bromide; inhalant
6.7
7.2
17
26
L04AX01
ATC
azathioprine; systemic
3.0
7.0
31
108
J94.8
ICD-10 Finland
Other specified pleural conditions
5.6
7.0
19
35
ZY000
NOMESCO Finland
Hospital inpatient
6.8
6.8
16
24
F20.30
ICD-10 Finland
Undifferentiated schizophrenia continuous
6.2
6.8
17
28
NH1AD
NOMESCO Finland
Ankle and foot CT
4.3
6.8
17
40
E87.1
ICD-10 Finland
Hypo-osmolality and hyponatraemia
2.9
6.7
32
116
OAA67, ,
SPAT
0.2
6.7
13
492
F10.31
ICD-10 Finland
Withdrawal symptoms caused by alcohol with seizures
7.3
6.7
15
21
S97
ICPC
Chronic ulcer skin
2.3
6.7
53
246
F33.9
ICD-10 Finland
Recurrent depressive disorder, unspecified
3.1
6.7
27
89
A31.0
ICD-10 Finland
Pulmonary mycobacterial infection
22.8
6.7
9
*
A41.8
ICD-10 Finland
Other specified sepsis
3.8
6.7
20
54
R02
ICPC
Shortness of breath/dyspnoea
1.9
6.7
85
473
SPAT1254
SPAT
Administration of medicine
1.9
6.6
92
527
XGX32
NOMESCO Finland
Bronchoscopic ultrasonography
8.8
6.6
13
15
L04AA06
ATC
mycophenolic acid; systemic
3.9
6.6
19
50
NK6QA
NOMESCO Finland
Measurement of bone density from two or more locations with X-ray
2.4
6.6
44
190
N05BA04
ATC
oxazepam; oral
1.7
6.6
156
1044
Z71.3
ICD-10 Finland
Dietary counselling and surveillance
3.0
6.6
29
101
JN1BD
NOMESCO Finland
Extensive CT examination of upper part of abdomen
10.2
6.6
12
12
J22
ICD-10 Finland
Unspecified acute lower respiratory infection
2.4
6.6
46
203
WX402
NOMESCO Finland
General anaesthesia
1.7
6.5
130
829
N06AA12
ATC
doxepin; systemic
2.5
6.5
42
178
J01AA02
ATC
doxycycline; systemic
1.6
6.5
453
3887
JDB10
NOMESCO Finland
Percutaneous gastrostomy
5.8
6.5
17
30
C34.11
ICD-10 Finland
Malignant tumor of the anterior, bronchial or pulmonary epidermoid carcinoma
7.5
6.4
14
19
P01AB01
ATC
metronidazole; oral, rectal
1.6
6.4
216
1572
R03AC12
ATC
salmeterol; inhalant
2.5
6.4
39
161
XF603
NOMESCO Finland
Direct intraarterial blood pressure measurement
2.9
6.4
30
108
A40.3
ICD-10 Finland
Sepsis due to Streptococcus pneumoniae
9.4
6.3
12
13
GDB20
NOMESCO Finland
Segmental resection of lung
+∞
6.3
6
*
GAC43
NOMESCO Finland
Total decortication of pleura
+∞
6.3
6
*
F05.9
ICD-10 Finland
Delirium, unspecified
3.7
6.2
19
52
Z72.1
ICD-10 Finland
Alcohol use
5.1
6.2
18
36
504
Kela drug reimbursment
Conditions requiring daily forced enteral nutrition
5.1
6.2
18
36
N04AA02
ATC
biperiden; systemic
4.0
6.2
17
43
N06AB10
ATC
escitalopram; oral
1.8
6.2
108
664
R03AL11
ATC
formoterol, glycopyrronium bromide and budesonide; inhalant
7.8
6.1
13
17
UJC12
NOMESCO Finland
Flexible oesophagoscopy
7.8
6.1
13
17
E87.6
ICD-10 Finland
Hypokalaemia
2.8
6.1
29
105
A41.5
ICD-10 Finland
Sepsis due to other Gram-negative organisms
2.8
6.1
30
111
E86
ICD-10 Finland
Volume depletion
3.2
6.1
24
78
B01AB04
ATC
dalteparin; parenteral
2.6
6.1
35
141
TGD04
NOMESCO Finland
Needle biopsy of the lungs in bronchoscopy
10.2
6.1
11
11
F10.20
ICD-10 Finland
Alcohol dependence currently independent
3.4
6.0
21
63
N05BE01
ATC
buspirone; oral
3.1
6.0
25
84

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
98
87
13.22
96.48
3.1
2.9
—
—
—
0
0
391
1572
5.11
86.29
8.7
4.6
—
—
—
0
0
80
77
11.80
74.26
1.3
1.5
36.95
30.92
g/l
2.82
72
69
69
66
11.65
64.12
1.4
1.3
17351.46
1686.69
e6/l
1.05
50
39
237
815
4.11
60.04
2.6
2.0
—
—
—
0
0
57
54
11.54
53.12
1.5
1.3
—
—
—
0
0
60
63
10.45
52.08
1.3
1.4
—
—
—
0
0
46
32
15.46
51.56
1.2
1.1
7.33
7.43
ph
1.18
30
22
242
925
3.67
51.20
6.6
3.8
0.78
0.82
mmol/l
4.01
232
883
58
60
10.57
50.86
1.4
1.3
24914.25
38385.75
e6/l
0.47
36
28
347
1764
3.23
44.55
11.4
6.6
—
—
—
0
0
187
658
3.65
44.01
10.1
7.8
7.42
7.42
ph
0.06
101
377
183
641
3.64
43.29
2.1
1.5
—
—
—
0
0
185
654
3.62
43.14
10.2
7.8
1.39
0.97
mmol/l
0.52
167
551
96
212
5.18
41.97
1.7
1.4
6.73
9.83
iu/ml
—
6
7
53
63
9.11
41.80
1.3
1.6
—
—
—
0
0
154
498
3.79
40.84
12.4
9.5
—
—
—
0
0
204
792
3.36
40.72
2.1
1.9
—
—
—
0
0
59
83
7.76
40.52
3.6
2.9
—
—
—
0
0
183
670
3.47
40.07
10.3
7.7
5.29
5.12
kpa
1.13
177
651
183
671
3.46
39.96
10.3
7.6
10.82
12.02
kpa
3.08
176
655
431
2627
3.16
37.78
13.0
6.7
0.04
0.04
e9/l
0.88
392
2243
430
2620
3.15
37.66
13.0
6.7
0.73
0.61
e9/l
13.09
390
2229
191
743
3.28
37.62
10.2
6.6
1.04
1.04
mmol/l
0.03
182
697
437
2705
3.14
36.85
14.1
7.0
0.20
0.20
e9/l
0.15
404
2351
433
2667
3.12
36.83
13.5
6.8
1.88
1.93
e9/l
0.26
400
2343
141
459
3.69
36.72
2.1
3.2
62.35
66.80
g/l
6.57
133
429
96
237
4.62
36.52
2.5
1.8
1.38
1.44
ug/l
0.03
86
212
161
611
3.22
32.53
11.0
7.9
95.00
95.17
%
0.14
154
597
447
2906
2.99
32.47
21.6
10.5
5.33
4.15
e9/l
14.31
415
2538
150
547
3.31
32.37
5.7
4.4
2.04
1.69
mmol/l
0.41
131
466
384
2354
2.69
30.43
14.5
7.1
1.19
1.21
mmol/l
6.41
370
2172
150
569
3.17
30.12
5.8
4.3
5.80
5.76
kpa
0.14
145
554
77
186
4.59
29.92
1.7
1.3
—
—
—
0
0
149
569
3.14
29.53
6.0
4.3
7.38
7.38
ph
0.18
91
336
146
561
3.10
28.54
11.4
8.3
115.89
122.05
g/l
2.97
141
551
181
787
2.84
28.27
12.3
7.2
102.77
104.39
mmol/l
3.13
181
787
37
46
8.50
28.02
1.2
1.1
—
—
—
0
0
105
333
3.60
27.99
5.5
4.4
—
—
—
0
0
422
2783
2.66
27.61
10.7
7.4
9.59
12.38
umol/l
4.93
414
2666
396
2606
2.47
24.83
14.1
7.8
1.19
1.21
mmol/l
4.71
359
2248
366
2345
2.39
24.08
8.6
5.5
30.96
35.56
g/l
25.63
353
2209
276
1580
2.36
23.38
8.7
4.7
7.40
7.40
ph
0.58
212
1136
96
323
3.34
23.14
9.7
9.6
15.07
16.07
%
3.10
91
313
149
649
2.71
22.65
2.1
1.7
—
—
—
0
0
179
861
2.52
22.15
4.0
2.6
2.11
2.27
g/l
2.71
164
808
82
258
3.51
21.92
1.6
2.0
1.83
1.49
g/l
1.65
68
235
187
927
2.46
21.61
3.9
2.7
9.71
13.20
umol/l
8.73
173
874
170
808
2.53
21.50
4.0
2.6
18.39
23.43
%
4.88
156
763
244
1378
2.28
20.76
3.1
2.2
3.00
2.91
mg/l
0.25
215
1191
246
1410
2.24
20.04
4.3
3.4
—
0.00
estimate
—
0
9
342
2254
2.17
19.38
25.5
12.3
0.00
0.00
e9/l
0.11
288
1832
257
1516
2.20
19.33
14.3
6.9
—
—
—
0
0
49
118
4.43
18.97
6.8
3.5
—
—
—
0
0
122
535
2.60
17.96
2.7
2.5
0.20
0.21
g/l
0.92
111
496
281
1754
2.11
17.91
4.9
3.7
26.25
94.98
e6/l
1.17
222
1368
251
1501
2.14
17.91
4.3
3.5
0.45
0.47
e6/l
0.08
194
1122
144
685
2.44
17.82
3.1
3.0
2.25
1.81
%
1.65
131
628
31
55
5.88
16.96
1.3
1.4
8.02
6.97
g/l
0.32
21
40
31
55
5.88
16.96
1.3
1.4
3.06
2.79
g/l
0.23
21
40
31
55
5.88
16.96
1.3
1.4
0.43
0.44
g/l
0.02
21
39
44
107
4.35
16.81
3.6
3.1
60.43
59.01
%
0.24
44
107
37
80
4.86
16.32
1.4
1.7
—
—
—
0
0
37
80
4.86
16.32
1.4
1.7
—
—
—
0
0
37
80
4.86
16.32
1.4
1.7
—
—
—
0
0
37
80
4.86
16.32
1.4
1.7
—
—
—
0
0
50
139
3.83
15.96
3.5
3.6
34.91
35.05
umol/l
0.01
44
129
105
452
2.60
15.94
3.4
2.5
10.20
10.97
g/l
0.84
99
416
366
2589
2.03
15.87
17.6
15.4
1.22
1.28
inr
1.22
318
2162
268
1700
2.02
15.82
4.4
2.6
—
—
—
0
0
30
56
5.58
15.57
1.3
1.4
—
—
—
0
0
24
36
6.90
15.40
2.2
1.3
5.54
0.32
u/ml
1.10
18
21
36
80
4.72
15.37
2.9
3.2
5.45
4.81
e9/l
0.57
36
80
120
566
2.39
14.93
3.2
4.9
5.39
29.50
ug/l
1.05
106
475
274
1781
1.97
14.82
4.7
3.6
36.60
35.70
u/l
0.11
263
1687
212
1264
2.04
14.63
3.9
2.6
—
—
—
0
0
47
134
3.72
14.47
3.4
2.2
118.73
127.02
g/l
1.30
33
106
182
1031
2.09
14.40
3.8
3.1
498.91
549.68
mosm/kgh2o
2.64
164
914
227
1395
2.00
14.33
3.9
3.2
—
—
—
0
0
270
1763
1.95
14.27
4.9
3.6
2.31
2.35
mmol/l
3.17
251
1607
412
3113
1.99
13.94
11.5
5.4
7.00
6.79
mmol/l
1.01
404
2979
290
1951
1.92
13.91
6.1
4.4
69.97
96.82
e6/l
0.43
224
1421
109
509
2.39
13.80
2.8
2.1
370.57
378.09
nmol/l
0.09
101
479
87
368
2.59
13.60
2.6
1.7
1.23
1.56
g/l
0.76
79
339
190
1119
2.01
13.36
2.4
1.8
1.68
1.36
mg/l
0.46
163
884
100
460
2.40
13.06
7.0
5.0
0.15
0.16
%
0.05
61
134
37
96
4.04
12.98
1.3
1.7
0.62
0.87
g/l
0.54
25
76
103
482
2.37
12.94
6.9
5.0
0.79
0.92
%
0.31
64
158
200
1211
1.97
12.92
4.0
2.7
6.28
3.85
e6/l
2.25
187
1117
109
524
2.31
12.87
2.3
3.0
83.46
68.53
e9/l
1.88
77
396
100
463
2.39
12.86
6.6
4.7
0.63
0.55
%
0.11
59
149
254
1670
1.89
12.78
4.0
2.7
55.18
63.83
u/l
1.25
243
1566
163
943
1.99
11.86
3.4
3.3
1.08
0.91
e6/l
0.28
80
525
417
3249
1.89
11.84
6.9
4.7
309.50
1388.64
e6/l
0.61
12
64
123
645
2.13
11.67
3.5
3.4
7.61
8.16
umol/l
0.13
102
586
90
415
2.37
11.64
6.9
3.9
5.06
5.13
kpa
0.36
83
402
27
60
4.66
11.52
3.7
3.8
—
—
—
0
0
88
409
2.34
11.16
6.9
3.9
7.41
7.42
ph
0.32
73
345
154
892
1.97
11.08
2.0
1.7
1239.64
1153.22
nmol/l
0.57
115
682
172
1048
1.89
10.58
5.0
4.1
244.70
466.81
ng/l
1.00
143
858
33
92
3.73
10.50
2.0
1.3
49.04
60.24
mmol/l
0.99
26
78
94
467
2.20
10.15
7.4
5.3
0.00
0.14
%
1.26
53
125
122
670
2.02
10.13
1.6
1.3
—
—
—
0
0
150
885
1.92
10.13
3.8
3.5
2.61
1.45
e6/l
0.76
68
467
19
19
10.28
10.07
3.2
1.4
—
—
—
0
0
81
381
2.30
9.97
2.1
2.9
—
—
—
0
0
97
497
2.13
9.67
4.3
2.5
31.48
34.08
u/l
0.29
89
424
316
2362
1.70
9.35
4.3
2.9
—
—
estimate
—
0
0
117
1919
0.52
9.35
4.5
3.2
—
—
—
0
0
226
1544
1.73
9.30
2.1
1.7
19.72
19.87
nmol/l
0.06
208
1304
238
1656
1.71
9.13
3.2
2.2
243.24
276.61
u/l
0.22
230
1569
168
1058
1.81
9.13
4.2
3.1
2.48
2.45
mmol/l
1.70
151
952
36
117
3.21
9.09
8.8
3.7
—
—
—
0
0
119
676
1.94
8.90
1.7
1.4
306.09
492.45
titre
1.32
23
151
26
69
3.89
8.87
9.7
5.3
414.33
344.75
umol/l
1.44
21
60
37
125
3.09
8.77
1.5
1.6
—
—
—
0
0
56
239
2.48
8.55
3.7
3.7
25.58
24.94
mmol/l
0.45
56
230
17
21
8.29
8.13
1.1
1.3
134.32
60.07
ug/l
—
6
7
157
1008
1.75
7.84
2.0
1.4
2.81
2.66
g/l
0.30
99
618
44
175
2.63
7.76
2.6
4.3
17.13
2.52
ratio
0.44
25
98
27
81
3.44
7.74
5.4
3.1
—
—
—
0
0
46
191
2.52
7.45
2.7
4.5
36.75
56.20
mg/l
0.65
38
166
46
191
2.52
7.45
2.7
4.5
124.92
85.29
mg/l
0.19
38
164
83
448
1.99
7.14
1.8
1.4
—
—
—
0
0
100
579
1.87
6.98
2.3
1.7
—
—
—
0
0
278
2121
1.57
6.83
5.7
4.0
58.35
43.04
ng/l
0.40
213
1579
12
11
11.10
6.82
1.2
2.5
—
—
—
0
0
33
123
2.78
6.61
7.0
2.4
—
—
—
0
0
37
148
2.60
6.48
4.9
2.8
3.16
2.17
index
0.50
19
90
424
4792
0.63
6.31
5.3
5.2
1.43
1.40
mmol/l
0.84
387
4426
110
680
1.75
6.16
2.3
1.7
—
—
—
0
0
292
2291
1.52
6.11
2.7
2.2
87.82
95.32
pmol/l
2.32
178
1245
36
147
2.54
6.06
7.5
2.3
—
—
—
0
0
71
385
1.95
6.02
6.1
4.5
125.36
90.31
ng/l
1.11
59
337
289
2271
1.52
5.95
4.7
3.0
172.92
160.69
ug/l
0.26
269
2115
71
390
1.93
5.80
1.9
1.5
—
—
—
0
0
34
140
2.51
5.64
1.5
1.2
—
—
—
0
0
37
161
2.38
5.46
7.7
5.5
1.10
1.37
mmol/l
1.25
28
144
19
58
3.35
5.34
1.6
1.4
21.37
28.59
ng/l
0.51
19
58
36
157
2.37
5.29
7.7
2.2
—
—
—
0
0
270
2131
1.48
5.23
4.8
3.5
6.30
6.17
ph
1.13
145
1222
36
158
2.36
5.22
7.4
2.2
—
—
—
0
0
36
158
2.36
5.22
8.4
2.2
—
—
—
0
0
19
59
3.29
5.21
2.4
2.4
10.19
10.50
%
0.10
19
59
157
1112
1.55
5.08
10.1
5.3
—
—
—
0
0
433
4811
0.66
4.97
5.3
5.3
4.36
4.53
mmol/l
2.87
399
4473
9
10
9.11
4.79
1.4
1.3
—
—
—
0
0
271
2172
1.44
4.70
3.1
2.5
71.54
76.45
nmol/l
2.00
258
1948
54
291
1.94
4.68
8.1
4.1
—
—
—
0
0
240
1884
1.45
4.64
2.3
2.2
—
—
—
0
0
12
22
5.54
4.62
1.2
1.1
346.33
135.63
iu/ml
1.22
12
22
18
59
3.11
4.55
1.7
1.5
279.62
277.47
mosm/kgh2o
0.12
13
45
161
1173
1.51
4.52
4.6
3.8
—
0.25
—
0
20
33
149
2.28
4.52
1.7
1.4
169.70
284.88
ug/g
2.37
20
89
19
65
2.98
4.48
1.2
1.3
—
—
—
0
0
11
19
5.87
4.46
2.9
1.4
—
—
—
0
0
49
261
1.95
4.40
3.0
3.2
4.13
4.53
pmol/l
1.92
44
231
412
4589
0.69
4.34
4.6
4.5
1.34
1.32
mmol/l
0.15
374
4218
11
20
5.58
4.30
3.6
2.3
0.60
0.59
mmol/l
0.15
11
20
67
399
1.76
4.26
6.5
3.6
—
—
—
0
0
34
160
2.19
4.24
8.2
2.0
—
—
—
0
0
142
1033
1.49
3.97
1.8
1.8
72174414.58
11266398.92
pmol/l
0.39
115
861
15
48
3.18
3.95
1.5
3.0
1644.93
1002.38
mg
0.46
15
48
108
1513
0.65
3.93
3.1
3.2
0.66
0.78
ug/l
0.99
78
954
18
433
0.40
3.87
1.3
1.4
—
—
—
0
0
66
405
1.71
3.79
4.3
3.2
266.42
198.05
ng/l
0.46
59
365
11
24
4.65
3.76
1.1
1.2
—
—
—
0
0
449
4888
0.70
3.70
5.8
6.0
2.48
2.66
mmol/l
4.20
411
4523
18
67
2.74
3.68
8.1
7.3
7.90
7.44
mmol/l
0.17
18
58
43
234
1.90
3.66
8.3
4.5
24.16
24.95
mmol/l
0.54
36
219
25
112
2.28
3.53
1.4
1.2
—
—
—
0
0
6
6
10.08
3.50
1.0
1.3
39.33
35.67
umol/l
—
6
6
312
2661
1.35
3.36
5.5
3.9
0.00
0.00
estimate
0.50
74
566
8
14
5.77
3.35
1.9
1.6
34.50
27.79
%
—
8
14
313
2673
1.35
3.33
5.6
3.9
0.00
0.59
estimate
0.51
73
521
78
517
1.58
3.33
1.7
1.5
—
—
—
0
0
308
2629
1.34
3.27
5.5
3.9
0.00
0.00
estimate
-0.00
77
557
22
97
2.32
3.23
5.5
3.5
10.05
8.72
pmol/l
0.19
22
97
31
158
2.01
3.20
1.7
1.6
17.10
10.06
u/ml
—
6
37
8
15
5.39
3.20
1.0
1.5
30.50
27.13
s
—
8
15
212
1717
1.36
3.15
4.5
3.3
1685.32
1464.39
ng/l
0.31
203
1476
6
8
7.56
3.06
13.0
8.1
9.17
5.53
mmol/l
—
6
8
7
12
5.89
3.03
1.4
2.4
13.70
18.54
umol/l
—
7
12
15
57
2.67
2.98
1.9
2.4
—
—
—
0
0
208
2499
0.75
2.94
5.0
5.6
2.29
2.87
ug/l
0.75
177
2244
14
52
2.73
2.90
1.0
1.2
—
—
—
0
0
428
4643
0.74
2.84
7.4
6.7
40.65
39.79
mmol/mol
0.86
389
4355
12
39
3.12
2.78
7.9
2.6
0.33
0.82
index
1.97
12
39
43
258
1.72
2.72
1.7
1.7
0.46
0.34
mg/l
0.52
25
120
6
10
6.05
2.70
1.0
1.0
—
—
—
0
0
8
19
4.25
2.68
1.8
1.8
—
—
—
0
0
20
93
2.19
2.63
1.0
1.1
—
—
—
0
0
5
7
7.19
2.55
1.2
1.0
13.80
16.90
g/l
—
5
7
6
11
5.50
2.55
1.2
1.1
—
—
—
0
0
21
103
2.08
2.44
1.0
1.1
—
—
—
0
0
6
12
5.04
2.40
1.0
1.3
—
—
—
0
0
9
27
3.37
2.40
1.3
1.9
—
—
—
0
0
17
77
2.24
2.39
1.2
1.3
4.38
4.56
u/ml
—
8
32
34
199
1.75
2.37
2.7
2.1
11.60
8.69
iu/ml
—
10
53
179
1466
1.31
2.37
6.2
3.9
0.00
0.01
estimate
0.78
66
505
7
17
4.15
2.36
3.1
8.5
26.00
26.36
mmol/l
—
7
17
31
516
0.58
2.33
1.4
1.5
—
—
—
0
0
65
457
1.47
2.16
2.8
2.5
10.05
8.21
ug/l
0.34
57
411
14
61
2.33
2.16
1.3
1.1
—
—
—
0
0
11
42
2.65
2.15
1.3
1.2
—
—
—
0
0
20
102
1.99
2.12
1.9
1.5
160.80
167.37
au/ml
—
5
28
14
62
2.29
2.09
1.3
2.7
—
—
—
0
0
14
62
2.29
2.09
1.1
1.1
—
—
—
0
0
441
4707
0.78
2.08
5.4
5.3
6.16
6.03
mmol/l
0.90
405
4323
512
4837
1.36
2.08
49.6
17.2
45.02
25.78
mg/l
23.05
495
4041
13
56
2.35
2.06
1.4
1.4
—
—
nmol/l
—
0
0
38
240
1.62
2.04
1.3
1.3
—
—
—
0
0
178
2100
0.79
1.98
2.0
2.0
1.40
1.38
mmol/l
0.14
154
1769
88
666
1.38
1.96
1.3
1.3
—
—
—
0
0
23
127
1.84
1.96
1.3
1.4
142.00
241.21
miu/ml
—
6
54
144
1175
1.29
1.93
6.6
4.0
1.02
1.02
kg/l
1.16
106
813
23
128
1.83
1.92
1.4
1.2
—
—
—
0
0
19
99
1.95
1.92
1.5
1.5
—
—
—
0
0
21
114
1.87
1.89
2.0
1.5
—
—
—
0
0
134
1086
1.30
1.89
1.4
1.3
1.54
1.30
u/ml
0.16
25
295
11
46
2.42
1.86
2.5
3.0
15.63
16.48
%
0.29
11
46
5
12
4.19
1.82
2.0
1.6
134.00
65.17
nmol/24h
—
5
12
52
363
1.47
1.82
1.2
1.2
—
—
—
0
0
16
80
2.03
1.81
2.0
2.6
32.75
33.24
pg
0.22
16
80
7
23
3.07
1.80
1.3
1.4
—
—
—
0
0
13
61
2.16
1.72
1.2
1.1
—
—
—
0
0
5
13
3.87
1.72
1.4
1.2
—
—
—
0
0
84
649
1.34
1.66
5.9
3.0
4.93
5.64
e9/l
0.34
75
561
33
213
1.58
1.66
3.5
4.9
442.82
305.02
mg/l
0.23
17
97
7
25
2.82
1.65
1.1
1.0
—
—
—
0
0
36
240
1.53
1.58
2.8
3.8
144.37
1586.52
u/ml
1.22
31
207
383
3545
1.21
1.54
6.1
4.3
—
9183.55
—
0
11
163
1394
1.23
1.45
1.5
1.4
—
—
—
0
0
13
66
1.99
1.44
1.0
1.2
—
—
—
0
0
7
29
2.43
1.39
1.0
1.4
1.29
2.95
u/field
—
7
19
8
164
0.48
1.37
1.0
1.1
0.92
0.92
g/l
—
8
164
14
75
1.89
1.35
1.1
1.3
30.77
77.81
mu/l
—
9
70
7
148
0.47
1.33
1.0
1.1
—
—
—
0
0
11
55
2.02
1.28
1.6
1.1
—
—
—
0
0
365
3396
1.18
1.27
5.5
3.6
81.40
53.96
u/l
3.12
349
3210
60
461
1.33
1.27
5.9
4.2
7.37
7.34
ph
0.56
49
330
8
157
0.50
1.26
1.0
1.1
1.57
1.49
g/l
—
8
157
18
108
1.69
1.23
2.2
4.1
4948.59
411.99
u/ml
0.42
12
102
5
19
2.64
1.22
10.6
3.8
—
—
—
0
0
6
26
2.32
1.19
1.0
1.1
—
—
—
0
0
17
102
1.69
1.17
2.1
1.8
1.79
5.34
iu/l
—
7
39
5
20
2.51
1.15
1.0
1.0
2423.00
1368.00
miu/ml
—
5
20
5
21
2.39
1.09
3.2
1.7
42.80
65.22
ug/l
—
5
21
159
1399
1.18
1.05
4.2
3.2
—
0.05
—
0
44
5
22
2.28
1.03
1.2
1.7
—
—
—
0
0
14
83
1.70
1.02
1.3
1.3
—
—
—
0
0
23
156
1.49
1.00
1.5
1.4
—
—
—
0
0
7
36
1.96
0.97
1.0
1.1
—
—
—
0
0
157
1393
1.17
0.93
4.0
3.1
364.95
359.81
umol/l
0.21
133
1230
6
28
2.15
0.91
1.0
1.1
—
—
—
0
0
18
265
0.67
0.90
1.0
1.1
—
—
—
0
0
11
180
0.60
0.87
1.4
1.6
—
—
—
0
0
514
4986
1.19
0.85
51.2
20.5
138.37
139.70
mmol/l
14.20
509
4901
20
137
1.48
0.85
1.5
1.6
36277.57
11571.20
e6/l
0.63
14
103
6
31
1.94
0.84
4.0
1.7
110.67
102.48
ng/l
—
6
31
6
32
1.88
0.82
1.2
1.0
182.00
140.77
nmol/l
—
6
32
11
66
1.68
0.79
1.7
2.0
9.55
10.60
mmol/l
1.00
11
66
379
3611
1.13
0.76
4.8
3.8
15.00
14.82
pmol/l
0.66
349
3281
514
4999
1.17
0.75
51.7
20.7
4.00
4.00
mmol/l
0.06
508
4911
5
25
2.01
0.73
1.2
1.0
—
—
—
0
0
33
421
0.77
0.72
1.8
1.5
—
—
—
0
0
9
56
1.62
0.72
1.2
1.2
—
—
—
0
0
9
57
1.59
0.71
6.0
1.5
—
—
—
0
0
5
26
1.93
0.70
1.2
2.8
18.64
348.64
ug/l
—
5
21
217
2008
1.12
0.70
6.0
3.8
0.00
0.03
estimate
1.71
68
476
7
41
1.72
0.70
1.7
2.1
—
—
—
0
0
67
569
1.20
0.68
2.6
2.7
184.77
125.32
ug/g
0.99
57
471
18
246
0.72
0.64
1.7
1.9
44.89
39.55
nmol/l
0.64
18
237
5
30
1.67
0.61
1.8
1.7
1.55
1.20
nmol/l
—
5
21
0
21
0.00
0.60
0.0
1.1
—
7.10
—
0
21
0
21
0.00
0.60
0.0
3.3
—
5.33
—
0
21
39
318
1.24
0.60
1.7
1.8
—
—
—
0
0
55
645
0.84
0.59
2.3
2.5
12.86
13.64
nmol/l
0.33
43
586
6
36
1.67
0.57
1.7
1.5
72.50
80.11
umol/l
—
6
36
30
239
1.27
0.56
1.1
1.1
—
—
—
0
0
517
5267
0.88
0.50
66.6
26.0
8.32
6.79
e9/l
31.42
509
5155
6
41
1.47
0.50
1.0
1.1
—
—
—
0
0
517
5266
0.88
0.50
66.9
26.1
124.36
136.76
g/l
43.01
512
5213
517
5265
0.88
0.49
66.3
25.9
4.16
4.52
e12/l
32.97
508
5155
517
5265
0.88
0.49
66.0
25.8
30.23
30.48
pg
2.18
512
5213
517
5265
0.88
0.49
68.1
26.5
37.75
40.64
%
27.93
512
5207
15
110
1.37
0.49
1.4
2.1
—
—
—
0
0
15
110
1.37
0.49
4.4
1.6
—
—
—
0
0
517
5264
0.89
0.48
66.2
25.9
91.76
91.33
fl
1.15
512
5213
7
46
1.53
0.48
3.3
3.0
6.89
8.58
mmol/l
—
7
46
12
166
0.72
0.48
1.0
1.2
—
—
—
0
0
18
233
0.77
0.48
2.2
1.8
—
—
—
0
0
517
5263
0.89
0.47
67.0
26.0
282.42
241.06
e9/l
20.00
508
5167
34
405
0.83
0.45
4.6
2.7
6.06
6.08
ph
0.04
24
284
29
239
1.22
0.43
2.3
2.9
—
—
—
0
0
0
17
0.00
0.40
0.0
1.1
—
—
—
0
0
93
848
1.11
0.40
1.4
1.3
23.93
35.31
iu/ml
0.95
35
270
5
34
1.47
0.40
1.2
1.4
—
—
—
0
0
17
215
0.78
0.39
1.2
1.1
—
32.20
—
0
5
502
5104
0.91
0.38
23.7
12.8
25.18
27.73
u/l
3.31
495
4978
14
107
1.32
0.37
1.9
1.2
18.01
38.93
u/l
0.92
14
94
5
37
1.35
0.37
1.0
1.2
—
6.65
—
0
11
6
42
1.43
0.35
1.5
1.1
112.17
100.62
pmol/l
—
6
42
6
45
1.34
0.34
1.0
1.2
—
—
—
0
0
7
53
1.32
0.31
1.6
1.2
—
—
—
0
0
15
121
1.25
0.28
4.2
1.6
113.40
13.35
e6/l
—
10
89
8
62
1.29
0.28
1.5
1.0
—
—
—
0
0
8
62
1.29
0.28
6.8
1.9
—
—
—
0
0
27
233
1.17
0.28
1.1
1.3
—
—
—
0
0
26
300
0.86
0.27
1.1
1.2
—
—
—
0
0
504
4974
1.07
0.26
36.8
15.2
—
—
—
0
0
15
123
1.23
0.25
4.1
1.6
2102.60
1071.56
e6/l
—
10
94
195
1878
1.06
0.24
5.0
3.6
6.18
8.02
mmol/l
9.96
173
1594
5
41
1.22
0.22
1.2
1.1
—
—
—
0
0
14
167
0.83
0.22
1.0
1.1
—
—
—
0
0
0
11
0.00
0.21
0.0
1.0
—
10.20
—
0
6
0
11
0.00
0.21
0.0
4.5
—
7.14
—
0
11
0
10
0.00
0.21
0.0
1.4
—
—
—
0
0
0
13
0.00
0.21
0.0
1.1
—
34.08
—
0
13
10
80
1.25
0.20
1.7
1.3
—
—
—
0
0
0
14
0.00
0.20
0.0
2.1
—
2.21
—
0
14
10
81
1.24
0.19
1.0
1.1
—
13.50
—
0
24
151
1457
1.05
0.18
6.3
3.4
0.00
0.06
estimate
0.58
64
437
27
243
1.12
0.17
2.3
2.4
0.00
0.01
estimate
—
6
80
7
63
1.11
0.17
2.4
3.6
3.10
6.30
nmol/l
—
7
63
63
595
1.07
0.15
1.6
1.4
—
—
—
0
0
48
449
1.07
0.15
2.4
2.2
0.00
0.03
estimate
—
8
93
177
1814
0.97
0.13
5.5
4.2
23.27
9.76
mg/mmol
1.08
133
1160
16
142
1.13
0.12
3.5
2.2
696.78
124.39
ug/min
—
9
81
17
152
1.12
0.12
25.8
11.6
—
—
—
0
0
10
86
1.17
0.11
1.0
1.1
—
—
—
0
0
5
44
1.14
0.10
1.0
1.0
—
—
—
0
0
175
1785
0.97
0.10
4.5
3.5
104.80
60.33
mg/l
0.94
140
1181
10
87
1.15
0.09
1.0
1.1
—
—
—
0
0
444
4409
1.03
0.08
6.0
4.8
1.87
1.97
mu/l
0.81
409
4046
5
60
0.83
0.08
8.6
3.5
15.00
30.57
u/ml
—
5
60
514
5158
0.98
0.05
52.8
22.6
86.77
82.73
umol/l
0.70
508
5110
26
250
1.04
0.03
2.3
2.4
—
—
—
0
0
77
783
0.98
0.03
1.4
1.3
19.67
12.07
u/ml
0.27
27
303
13
135
0.96
0.00
3.2
5.0
—
—
—
0
0
27
268
1.01
0.00
1.2
1.2
47.13
126.92
u/ml
—
8
107
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
0.02
—
0
5
0
8
0.00
-0.00
0.0
9.0
—
10.50
—
0
8
5
56
0.89
-0.00
1.4
2.2
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.7
—
0.57
—
0
6
0
7
0.00
-0.00
0.0
1.0
—
0.51
—
0
7
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.3
—
74.33
—
0
6
0
8
0.00
-0.00
0.0
4.5
—
48.88
—
0
8

Mortality – FinRegistry

Association

Association between endpoint J10_ABSCLUNGPNEUMO and mortality.

Females

Parameter HR [95% CI] p-value
J10_ABSCLUNGPNEUMO 4.25 [3.11, 5.8] < 0.001
Birth year 0.992 [0.98, 1.0] 0.069

During the follow-up period (1.1.1998 — 31.12.2019), 385 out of 944 females with J10_ABSCLUNGPNEUMO died.

Males

Parameter HR [95% CI] p-value
J10_ABSCLUNGPNEUMO 4.708 [3.8, 5.83] < 0.001
Birth year 0.988 [0.98, 1.0] 0.018

During the follow-up period (1.1.1998 — 31.12.2019), 890 out of 2011 males with J10_ABSCLUNGPNEUMO died.

Mortality risk

Mortality risk for people of age

years, who have J10_ABSCLUNGPNEUMO.

N-year risk Females Males
1 0.272% 1.001%
5 1.99% 5.415%
10 5.023% 14.01%
15 10.22% 24.788%
20 16.725% 38.003%

Relationships between endpoints

Index endpoint: J10_ABSCLUNGPNEUMO – Abscess of lung

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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