No definition available.
Atypical virus infections of central nervous system, including avohilmo
AB1_ATYPICAL_CNS_VIRUS_WIDE
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
557745 |
1. Apply sex-specific ruleNone |
557745 |
2. Check conditionsNone |
557745 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
3 out of 7 registries used, show all original rules. |
379 |
4. Check minimum number of eventsNone |
379 |
5. Include endpointsNone |
379 |
6. Filter based on genotype QC (FinnGen only) |
346 |
Control definitions (FinnGen only)
- Control exclude
- AB1_VIRAL_CNS
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF5
Similar endpoints
↥List of similar endpoints to
Atypical virus infections of central nervous system, including avohilmo
based on the number of shared cases.
Similar with more cases:
- Viral infections of the central nervous system, including avohilmo
- Certain infectious and parasitic diseases, including avohilmo
- Any prescribed medicine buy
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 346 | 205 | 141 |
| Unadjusted period prevalence (%) | 0.07 | 0.07 | 0.06 |
| Median age at first event (years) | 26.49 | 26.74 | 26.13 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
No data
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 360
- Matched controls
- 3600
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
04599
ICD-8 Finland
Aseptic mentingitis due to enterovirus, Aseptic meningitis, unspecified
+∞
248.8
209
*
04597
ICD-8 Finland
Aseptic mentingitis due to enterovirus, Suspecta
+∞
53.5
50
*
A81.0
ICD-10 Finland
Creutzfeldt-Jakob disease
+∞
33.9
32
*
A81.2
ICD-10 Finland
Progressive multifocal leukoencephalopathy
+∞
30.7
29
*
04500
ICD-8 Finland
Aseptic mentingitis due to enterovirus, Coxsackie virus
+∞
15.7
15
*
32099
ICD-8 Finland
Meningitis, With no organism specified as cause
33.6
10.4
13
*
A81.8
ICD-10 Finland
Other atypical virus infections of central nervous system
+∞
8.4
8
*
A81.9
ICD-10 Finland
Atypical virus infection of central nervous system, unspecified
+∞
8.4
8
*
N03AX12
ATC
[U] gabapentin; oral
2.1
7.0
74
392
J01MA12
ATC
levofloxacin; systemic
2.1
7.0
75
400
J18.9
ICD-10 Finland
Pneumonia, unspecified
2.0
6.9
95
554
GD1QA
NOMESCO Finland
Supine thorax X-ray examination
2.1
6.8
70
367
F02.19*A81.0
ICD-10 Finland
Dementia in Jakob-Creutzfeldt's disease without information on additional symptoms
+∞
6.3
6
*
A81.1
ICD-10 Finland
Subacute sclerosing panencephalitis
+∞
6.3
6
*
SPAT1215
SPAT
Assessment of need for medical rehabilitation
3.5
6.1
21
63
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
34
110
3.31
8.78
3.8
3.4
24.93
25.02
mmol/l
0.06
28
103
206
1480
1.92
8.28
6.6
6.0
1.21
1.21
mmol/l
0.00
183
1355
7
0
+∞
7.31
1.3
0.0
—
—
—
0
0
41
171
2.58
6.73
3.6
3.1
1.22
1.97
mmol/l
0.56
30
121
16
39
4.25
6.15
1.1
1.1
—
—
—
0
0
23
75
3.21
5.88
1.3
1.1
5.13
6.33
e6/l
0.11
16
58
212
1635
1.72
5.86
7.4
7.0
1.21
1.21
mmol/l
0.09
165
1406
16
37
4.48
5.00
1.1
1.1
—
—
—
0
0
224
2631
0.61
4.80
27.2
19.4
333.00
332.45
g/l
0.46
224
2621
10
15
6.82
4.49
1.1
1.1
—
—
—
0
0
21
77
2.83
4.43
1.6
1.2
2424.25
159.32
e6/l
0.45
16
62
169
1289
1.59
4.42
4.6
3.7
42.38
85.27
ng/l
0.45
124
913
8
9
9.06
4.30
1.1
1.1
—
—
—
0
0
8
9
9.06
4.30
1.1
1.2
—
—
—
0
0
229
1884
1.59
4.26
4.5
4.9
6.66
6.70
mmol/l
0.13
219
1802
8
10
8.15
4.08
1.1
1.2
—
—
—
0
0
10
18
5.68
4.00
1.2
1.0
—
—
—
0
0
188
1494
1.54
3.96
19.1
11.7
1.25
1.20
inr
0.62
165
1217
78
508
1.68
3.79
2.1
2.0
—
—
—
0
0
7
8
8.89
3.79
1.3
1.4
—
—
—
0
0
6
5
12.17
3.77
1.2
1.4
—
—
—
0
0
65
409
1.72
3.57
5.3
5.8
1.01
1.02
mmol/l
0.09
59
380
7
9
7.90
3.57
1.1
1.2
—
—
—
0
0
7
9
7.90
3.57
1.1
1.2
—
—
—
0
0
223
1863
1.52
3.56
13.7
10.1
4.01
3.98
e9/l
0.06
194
1632
65
414
1.70
3.42
5.5
4.9
29.65
32.07
%
1.30
49
265
124
933
1.50
3.21
1.9
1.7
21.10
21.03
nmol/l
0.01
97
783
(3016894) Varicella zoster virus DNA [Presence] in Cerebral spinal fluid by NAA with probe detection
8
15
5.43
3.21
1.1
1.2
—
—
—
0
0
7
11
6.46
3.20
1.0
1.1
—
—
—
0
0
80
551
1.58
3.08
3.6
3.3
0.81
0.82
mmol/l
0.41
74
522
44
259
1.80
3.04
4.3
3.6
1.24
1.23
mmol/l
0.50
34
226
103
759
1.50
2.91
2.4
2.2
3.14
3.10
mg/l
0.05
92
661
7
13
5.47
2.88
1.7
1.2
—
—
—
0
0
6
9
6.76
2.88
1.2
1.2
—
—
—
0
0
132
1026
1.45
2.84
2.4
2.6
56.75
63.09
u/l
0.64
119
950
234
2022
1.45
2.82
5.3
4.4
14.33
3545.22
e6/l
—
6
32
10
28
3.64
2.80
5.3
2.2
—
—
—
0
0
7
14
5.08
2.74
1.0
1.4
—
—
—
0
0
8
19
4.28
2.69
1.5
1.6
—
—
—
0
0
114
872
1.45
2.64
3.0
2.7
340.85
340.86
umol/l
0.00
97
765
10
30
3.40
2.62
1.2
1.1
—
—
—
0
0
32
180
1.85
2.57
1.7
1.8
—
—
—
0
0
37
218
1.78
2.57
1.2
1.4
—
31.01
—
0
14
5
7
7.22
2.55
1.0
1.1
—
—
—
0
0
20
95
2.17
2.54
1.3
1.2
—
—
—
0
0
10
31
3.29
2.53
1.1
1.0
—
—
—
0
0
21
102
2.12
2.52
2.4
1.9
—
—
—
0
0
72
507
1.53
2.50
2.8
2.3
2.30
2.37
g/l
0.46
66
464
102
772
1.45
2.48
2.9
2.3
—
—
—
0
0
74
528
1.51
2.41
1.8
1.5
—
—
—
0
0
24
126
1.97
2.37
1.5
1.9
1.62
3.12
ug/l
0.29
19
117
21
105
2.06
2.36
2.2
2.1
1251.16
347.38
ug/l
0.51
21
98
21
106
2.04
2.30
1.8
2.7
—
—
—
0
0
7
18
3.94
2.26
1.6
1.6
—
—
—
0
0
172
1445
1.36
2.23
5.6
4.8
35.14
36.16
g/l
1.37
159
1367
170
1426
1.36
2.23
2.3
2.1
106.51
97.78
pmol/l
1.25
94
718
141
1150
1.37
2.20
4.5
3.3
2.35
2.36
mmol/l
0.75
128
1050
16
74
2.22
2.18
1.9
1.9
—
—
—
0
0
267
2412
1.41
2.18
5.3
4.4
12.98
11.58
mm/h
0.66
248
2249
56
389
1.52
2.07
1.6
1.8
—
—
—
0
0
7
20
3.55
2.06
1.6
1.6
—
—
—
0
0
66
476
1.47
2.04
1.9
1.8
29.29
29.19
s
0.06
66
466
8
26
3.12
2.02
1.9
1.5
—
—
—
0
0
94
726
1.40
2.01
1.6
1.7
1.31
1.22
mg/l
0.06
65
568
68
495
1.46
2.01
2.1
1.7
1087.48
1213.10
nmol/l
0.57
51
377
19
98
1.99
1.99
1.8
1.2
—
—
—
0
0
52
359
1.52
1.98
5.4
8.2
0.94
1.03
mmol/l
0.05
45
307
273
2491
1.40
1.97
10.1
8.5
81.80
78.39
u/l
0.38
257
2354
19
99
1.97
1.94
1.6
4.0
1.04
2.23
ratio
—
9
52
269
2455
1.38
1.89
4.7
4.3
14.99
14.74
pmol/l
0.84
240
2256
20
108
1.90
1.85
1.5
4.3
40.18
38.98
mg/l
0.04
13
92
20
108
1.90
1.85
1.5
4.3
117.41
46.32
mg/l
0.38
13
91
52
365
1.50
1.84
1.6
1.9
—
—
—
0
0
73
548
1.42
1.83
2.9
2.4
12.17
13.39
umol/l
0.94
68
507
6
18
3.37
1.75
1.0
2.4
—
—
—
0
0
46
319
1.51
1.73
4.0
3.3
—
—
—
0
0
46
321
1.50
1.68
2.8
2.0
358.34
381.71
nmol/l
0.39
41
305
169
1459
1.30
1.67
3.3
2.7
—
—
estimate
—
0
0
27
167
1.67
1.63
1.9
1.3
—
—
—
0
0
37
249
1.54
1.60
3.6
3.5
91.84
80.20
ng/l
0.26
26
218
9
37
2.47
1.49
2.0
2.1
—
—
—
0
0
36
248
1.50
1.42
2.4
2.3
5.71
7.57
ug/l
0.44
30
223
197
1761
1.26
1.39
8.1
6.8
11.18
11.18
umol/l
0.00
185
1680
34
233
1.51
1.38
2.4
1.5
—
—
—
0
0
13
68
1.95
1.35
1.3
1.3
—
—
—
0
0
10
47
2.16
1.35
2.2
1.5
—
—
—
0
0
9
42
2.17
1.34
3.3
4.4
318.56
372.11
umol/l
—
9
37
11
54
2.07
1.34
1.4
1.6
—
—
—
0
0
15
83
1.84
1.33
1.3
1.4
—
—
—
0
0
18
106
1.73
1.32
2.9
2.1
—
—
—
0
0
8
35
2.31
1.27
1.1
1.2
—
—
—
0
0
8
35
2.31
1.27
2.0
2.1
—
—
—
0
0
18
108
1.70
1.24
1.9
2.9
1.17
1.44
mg/l
1.42
18
98
5
19
2.65
1.22
4.2
2.2
—
—
—
0
0
49
370
1.38
1.21
12.0
6.6
—
—
—
0
0
8
38
2.13
1.19
1.4
1.9
-0.76
0.89
mmol/l
—
8
38
323
3102
1.40
1.14
21.5
15.1
22.04
22.34
mg/l
0.06
281
2526
7
30
2.36
1.13
1.1
1.2
—
—
—
0
0
209
1910
1.22
1.10
3.2
2.9
—
—
—
0
0
5
21
2.40
1.09
15.8
15.8
751.40
983.33
nmol/l
—
5
21
15
89
1.72
1.09
1.3
1.3
—
—
—
0
0
319
3062
1.37
1.09
20.0
15.0
80.93
81.42
ml/min/173m2
0.17
299
2837
42
316
1.37
1.07
6.0
8.7
124.48
122.75
g/l
0.20
42
309
7
35
2.02
1.00
1.1
1.5
—
—
—
0
0
79
657
1.26
1.00
1.7
1.7
485.44
20968187.35
pmol/l
0.50
57
558
5
23
2.19
0.98
1.0
1.7
—
—
—
0
0
166
1499
1.20
0.95
2.7
2.5
78.47
77.32
nmol/l
0.18
145
1351
7
37
1.91
0.94
1.1
1.3
—
—
—
0
0
9
52
1.75
0.93
1.1
1.1
—
—
—
0
0
129
1143
1.20
0.89
3.2
3.6
38.67
33.04
u/l
0.46
123
1079
111
973
1.20
0.86
3.6
3.2
749.04
997.26
ng/l
0.83
93
819
8
47
1.72
0.81
2.0
1.4
—
—
—
0
0
133
1472
0.85
0.79
2.2
2.0
1.32
1.39
mmol/l
0.39
95
1251
13
82
1.61
0.79
1.4
1.5
—
—
—
0
0
108
953
1.19
0.77
4.3
3.8
0.00
0.01
estimate
0.69
39
325
238
2243
1.18
0.76
3.9
3.5
60.35
48.75
u/l
0.63
223
2123
9
55
1.65
0.74
1.1
1.3
—
—
—
0
0
9
55
1.65
0.74
1.1
1.3
—
—
—
0
0
11
68
1.64
0.72
1.4
1.5
—
—
—
0
0
126
1133
1.17
0.72
4.3
3.1
—
—
—
0
0
7
40
1.76
0.71
1.1
1.3
—
—
—
0
0
5
26
1.94
0.71
1.2
3.2
2630.20
975.42
mg
—
5
26
11
69
1.61
0.69
1.4
1.5
—
—
—
0
0
65
757
0.83
0.68
3.6
4.1
23.08
21.70
%
0.25
24
318
7
43
1.64
0.67
1.3
1.3
121.86
383.63
pmol/l
—
7
38
16
111
1.46
0.67
1.6
1.3
269.90
292.34
ug/g
—
10
69
16
111
1.46
0.67
1.5
1.6
114.42
8.84
u/ml
—
5
24
15
103
1.48
0.66
1.6
1.5
—
0.06
—
0
18
10
62
1.63
0.65
2.4
1.8
—
—
—
0
0
160
1476
1.15
0.64
3.3
2.9
140.34
118.75
ug/l
0.84
147
1379
14
96
1.48
0.62
3.3
2.4
—
—
—
0
0
0
21
0.00
0.60
0.0
1.4
—
9.19
—
0
21
21
275
0.75
0.59
1.7
2.8
64.34
64.89
ml/min/173m2
—
10
116
11
73
1.52
0.57
1.7
1.5
—
—
—
0
0
15
107
1.42
0.56
2.1
2.6
24.23
24.94
mmol/l
0.35
15
107
8
125
0.63
0.55
1.0
1.2
0.82
0.88
g/l
—
8
125
15
108
1.41
0.54
1.1
1.7
—
—
—
0
0
6
39
1.55
0.53
1.0
1.1
—
—
—
0
0
8
119
0.66
0.46
1.6
1.3
—
2.27
—
0
7
8
120
0.66
0.46
1.0
1.1
1.53
1.52
g/l
—
8
120
12
86
1.41
0.45
2.5
1.6
—
—
—
0
0
5
31
1.62
0.43
1.0
1.0
—
—
—
0
0
8
56
1.44
0.43
1.6
3.1
—
1337.00
—
0
5
300
2926
1.15
0.43
6.0
5.4
1.90
1.88
mu/l
0.06
269
2706
6
94
0.63
0.42
1.7
1.2
—
59.48
—
0
13
5
32
1.57
0.42
1.2
1.4
1.39
1.30
promille
—
5
27
13
96
1.37
0.42
1.2
1.2
—
—
—
0
0
5
33
1.52
0.41
1.6
3.3
2.90
3.53
nmol/l
—
5
33
54
477
1.16
0.40
1.6
1.5
—
—
—
0
0
24
196
1.24
0.40
5.0
7.4
25.92
24.75
mmol/l
0.81
24
187
10
71
1.42
0.39
1.1
1.3
—
—
—
0
0
12
89
1.36
0.38
1.2
1.4
—
—
—
0
0
9
67
1.35
0.38
2.0
2.8
7.31
8.52
pmol/l
—
9
67
19
152
1.26
0.37
1.3
1.4
0.25
0.31
mg/l
—
9
62
8
115
0.69
0.37
1.9
1.3
—
3.24
—
0
24
82
752
1.12
0.36
3.9
3.9
1.02
1.02
kg/l
0.53
60
498
15
117
1.29
0.36
3.3
2.4
—
—
—
0
0
123
1155
1.10
0.34
3.5
3.4
7.52
7.71
mmol/l
0.14
95
982
299
3047
0.89
0.32
6.9
6.5
39.05
39.27
mmol/mol
0.18
273
2878
72
661
1.11
0.31
3.9
2.6
2.47
2.45
mmol/l
0.60
63
603
10
75
1.34
0.30
2.7
2.6
8.13
8.01
kpa
—
10
75
103
965
1.09
0.30
3.3
3.2
0.00
0.01
estimate
0.74
32
286
96
897
1.10
0.30
3.8
3.1
0.28
0.47
e6/l
0.88
74
646
22
258
0.84
0.28
1.9
1.9
3.68
3.54
mmol/l
0.30
17
202
138
1320
1.07
0.24
3.8
3.6
0.00
0.02
estimate
0.78
34
291
83
778
1.09
0.24
1.4
1.3
0.52
1.12
u/ml
2.15
21
217
7
94
0.74
0.22
1.6
1.3
—
1.00
—
0
6
56
518
1.10
0.22
3.6
2.9
1.41
2.10
e6/l
0.64
32
245
12
98
1.23
0.21
1.3
1.2
—
—
—
0
0
0
11
0.00
0.21
0.0
1.3
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
0
12
0.00
0.21
0.0
2.4
—
—
—
0
0
29
320
0.90
0.18
4.2
3.3
5.50
5.72
kpa
0.69
29
311
312
3085
1.09
0.17
6.0
5.2
6.03
5.96
mmol/l
0.28
274
2856
13
110
1.19
0.17
2.2
1.6
—
—
—
0
0
54
575
0.93
0.16
2.8
2.9
0.59
0.76
ug/l
1.16
30
324
48
448
1.08
0.16
6.1
7.0
103.96
103.99
mmol/l
0.02
48
448
319
3220
0.92
0.16
6.3
6.1
2.76
2.76
mmol/l
0.00
289
2997
11
93
1.19
0.14
1.1
1.3
—
—
—
0
0
18
160
1.13
0.14
2.4
2.1
7.82
9.07
iu/ml
—
6
45
37
344
1.08
0.14
2.1
2.2
3.70
3.49
ratio
0.53
31
283
8
96
0.83
0.14
1.6
1.3
—
—
—
0
0
331
3333
0.91
0.13
15.4
12.3
27.72
27.08
u/l
0.29
317
3246
30
277
1.09
0.13
1.6
1.4
—
—
—
0
0
11
94
1.18
0.13
2.2
1.6
—
—
—
0
0
63
603
1.05
0.11
1.4
1.3
16.94
12.46
u/ml
0.20
24
241
92
950
0.96
0.11
4.0
4.8
1.64
2.22
ug/l
0.69
78
850
57
596
0.95
0.11
3.9
3.9
152.41
280.91
ng/l
0.39
43
464
5
44
1.14
0.10
1.4
1.3
—
—
—
0
0
12
108
1.11
0.07
1.3
1.3
—
—
—
0
0
9
88
1.02
0.07
1.1
1.2
—
10.84
—
0
8
306
3042
1.04
0.06
4.9
4.4
1.41
1.31
mmol/l
0.57
273
2812
25
264
0.94
0.06
2.5
1.9
—
—
—
0
0
316
3176
0.96
0.06
6.0
5.4
4.74
4.71
mmol/l
0.25
288
2972
315
3165
0.96
0.05
5.8
5.3
1.46
1.48
mmol/l
0.30
284
2944
174
1757
0.98
0.04
4.2
3.8
0.00
0.02
estimate
0.79
36
323
171
1726
0.98
0.04
4.1
3.8
0.00
0.00
estimate
0.50
39
350
10
109
0.92
0.04
1.4
1.4
—
—
—
0
0
14
149
0.94
0.03
2.6
4.8
1.96
1.60
%
0.77
14
138
173
1744
0.98
0.03
4.1
3.8
0.00
4.59
estimate
0.50
40
354
33
340
0.97
0.03
5.7
4.6
15.61
19.10
ug/l
0.08
26
285
114
1129
1.01
0.02
4.8
4.1
6.46
8.01
mg/mmol
0.24
62
693
67
662
1.01
0.01
1.5
1.3
54.96
36.19
iu/ml
0.29
21
206
55
557
0.99
0.01
3.5
2.8
1.38
1.00
e6/l
0.30
31
283
15
156
0.96
0.00
1.0
1.0
—
—
—
0
0
23
236
0.97
0.00
2.3
1.9
—
—
—
0
0
11
107
1.03
0.00
1.6
2.3
0.00
0.05
g/l
0.50
11
101
10
104
0.96
0.00
1.7
2.2
0.00
0.00
g/l
—
10
94
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
65.20
—
0
5
0
5
0.00
-0.00
0.0
1.0
—
1.21
—
0
5
0
5
0.00
-0.00
0.0
1.2
—
8.64
—
0
5
5
50
1.00
-0.00
1.0
1.3
0.50
0.56
nmol/l
—
5
44
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
16
160
1.00
-0.00
1.3
1.4
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: AB1_ATYPICAL_CNS_VIRUS_WIDE – Atypical virus infections of central nervous system, including avohilmo
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).