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This is a non-core endpoint: only basic statistics are computed.

Contact with hypodermic needle

VWXY20_CONTACT_W_HYPODE_NEEDLE

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 W46
  • Cause of death: ICD-10 W46

2 out of 7 registries used, show all original rules.

235

4. Check minimum number of events

None

235

5. Include endpoints

None

235

6. Filter based on genotype QC (FinnGen only)

210

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
5
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
W[2-4]

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 210 175 35
Unadjusted period prevalence (%) 0.05 0.06 0.02
Median age at first event (years) 35.26 34.96 36.74

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
223
Matched controls
2230
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
W46
ICD-10 Finland
Contact with hypodermic needle
+∞
316.7
223
*
S61.0
ICD-10 Finland
Open wound of finger(s) without damage to nail
8.4
48.3
81
142
Z25.8
ICD-10 Finland
Need for immunization against other specified single viral diseases
5.6
27.5
64
149
Z25.1
ICD-10 Finland
Need for immunization against influenza
9.9
26.1
32
37
T81.2
ICD-10 Finland
Accidental puncture and laceration during a procedure, not elsewhere classified
16.5
9.2
14
9
Z04.2
ICD-10 Finland
Examination and observation following work accident
41.3
6.8
8
*
Z03.9
ICD-10 Finland
Observation for suspected disease or condition, unspecified
2.4
6.3
52
254

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
97
163
9.76
61.33
1.8
1.4
252.06
313.73
miu/ml
0.68
51
86
91
403
3.13
14.85
2.4
1.6
—
—
—
0
0
42
121
4.04
13.27
2.9
4.0
7.38
7.34
ph
0.62
29
90
64
255
3.12
12.23
2.0
1.6
—
—
—
0
0
117
734
2.25
8.11
2.3
1.9
—
—
—
0
0
129
872
2.14
7.08
2.9
2.3
—
—
—
0
0
75
430
2.12
6.17
3.4
2.3
—
—
—
0
0
181
1463
2.26
5.45
4.2
3.0
28.91
31.43
u/l
0.57
181
1420
24
95
2.71
4.47
2.2
1.8
—
0.03
estimate
—
0
39
211
1879
3.28
4.30
4.0
4.1
2.89
2.81
mmol/l
0.81
206
1805
42
219
2.13
4.29
1.2
1.2
—
—
—
0
0
209
1861
2.96
4.07
3.9
3.8
1.51
1.50
mmol/l
0.23
204
1790
41
218
2.08
3.97
1.1
1.2
—
—
—
0
0
107
789
1.68
3.59
2.1
1.9
—
—
—
0
0
5
189
0.25
3.44
1.8
1.5
—
—
—
0
0
79
546
1.69
3.32
5.4
8.0
1.04
1.08
inr
0.58
58
459
19
79
2.54
3.23
2.2
3.0
7.42
7.41
ph
0.79
12
63
6
193
0.29
3.13
1.8
1.6
—
—
—
0
0
15
59
2.65
2.85
2.1
3.0
—
—
—
0
0
9
23
4.03
2.80
2.3
2.4
12.93
21.19
mu/l
—
9
23
31
171
1.94
2.71
2.3
1.8
—
0.07
estimate
—
0
46
14
59
2.46
2.34
1.1
1.2
—
—
—
0
0
5
9
5.65
2.22
1.0
1.0
—
—
—
0
0
41
263
1.68
2.21
2.0
2.2
5197.73
7689.97
u/l
0.29
18
117
35
215
1.74
2.20
2.0
2.4
2.58
2.45
g/l
0.92
35
196
53
364
1.60
2.20
2.2
2.5
58.21
90.26
ug/g
1.29
38
289
93
730
1.47
2.07
4.7
7.1
1.22
1.21
mmol/l
0.54
81
640
217
2073
2.74
1.98
11.5
10.0
—
—
—
0
0
35
222
1.68
1.97
1.2
1.2
—
—
—
0
0
6
16
3.82
1.95
3.2
1.5
1.03
0.85
e9/l
—
6
16
78
599
1.46
1.91
6.2
6.3
—
—
—
0
0
12
52
2.38
1.91
1.3
1.2
322.43
308.50
mu/l
—
7
44
6
17
3.60
1.85
1.3
1.2
—
—
—
0
0
5
12
4.24
1.83
2.6
3.7
—
—
—
0
0
11
50
2.26
1.59
3.0
3.0
25.03
24.06
mmol/l
0.99
11
50
66
507
1.43
1.58
2.7
2.7
12.06
198.14
ng/l
0.50
31
217
6
21
2.91
1.51
1.2
1.3
22.52
23.34
ng/l
—
6
21
7
28
2.55
1.46
1.7
1.2
—
—
—
0
0
5
16
3.17
1.44
2.0
1.1
1.32
1.04
promille
—
5
11
29
191
1.60
1.44
2.0
2.5
22.31
24.99
%
0.59
29
177
35
243
1.52
1.39
1.7
3.1
4.23
5.63
e9/l
0.56
30
226
32
451
0.66
1.36
2.1
3.4
7.39
7.40
ph
0.05
23
300
10
191
0.50
1.33
1.3
1.6
—
—
—
0
0
54
413
1.41
1.32
1.3
1.3
6.23
7.04
u/ml
0.06
12
170
21
322
0.62
1.30
1.2
1.3
—
—
—
0
0
198
1862
1.57
1.30
10.0
10.8
3.89
3.89
mmol/l
0.03
193
1811
79
649
1.34
1.23
4.1
6.4
1.22
1.22
mmol/l
0.57
69
609
5
19
2.67
1.22
1.2
2.9
—
—
—
0
0
198
1869
1.53
1.19
5.4
5.5
1.65
1.68
mu/l
0.15
193
1792
5
20
2.53
1.15
1.0
1.2
—
—
—
0
0
75
894
0.76
1.15
7.5
9.0
0.00
0.00
e9/l
0.69
62
734
5
21
2.41
1.09
1.0
1.0
—
3.84
—
0
7
77
641
1.31
1.08
2.3
2.0
—
—
—
0
0
43
328
1.39
1.07
1.6
1.4
1146.67
547.43
titre
—
9
70
56
446
1.34
1.07
1.4
1.4
10.46
20.31
iu/ml
—
9
122
105
919
1.27
0.98
6.2
6.2
0.67
0.68
%
0.05
98
867
105
920
1.27
0.97
6.1
6.1
2.75
2.79
%
0.06
98
872
53
426
1.32
0.95
1.6
1.5
20.40
20.16
nmol/l
0.04
47
389
17
112
1.56
0.88
1.5
1.7
0.14
0.27
mg/l
—
7
42
57
683
0.78
0.87
3.4
3.3
15.22
54.51
e6/l
0.96
41
425
27
198
1.41
0.85
2.2
1.9
—
—
—
0
0
104
922
1.24
0.84
6.2
6.2
8.16
8.13
%
0.04
97
878
23
164
1.45
0.84
1.7
2.0
6.25
6.14
ph
—
10
105
90
787
1.24
0.82
1.8
1.8
1.15
1.36
mmol/l
2.46
75
716
19
132
1.48
0.79
3.6
5.1
0.00
0.08
%
—
9
25
17
116
1.50
0.77
1.2
1.4
—
—
—
0
0
77
879
0.81
0.76
2.2
2.4
—
—
—
0
0
111
1000
1.22
0.74
3.6
4.9
5.96
6.25
mmol/l
1.24
101
892
7
39
1.82
0.73
1.4
1.6
5.49
7.13
mmol/l
—
7
39
16
111
1.48
0.68
2.2
5.0
7.40
7.38
ph
—
9
58
5
28
1.80
0.66
2.8
3.4
8.44
8.49
kpa
—
5
28
8
128
0.61
0.66
1.1
1.1
—
—
—
0
0
41
495
0.79
0.66
3.4
3.0
1.02
1.02
kg/l
0.57
31
322
208
2019
1.45
0.66
12.7
12.1
68.16
68.11
umol/l
0.02
208
1996
18
129
1.43
0.66
3.8
4.8
0.56
1.18
%
—
9
28
14
95
1.51
0.66
1.5
1.3
6.99
3.05
ug/l
0.44
14
88
7
44
1.61
0.65
1.3
1.1
—
—
—
0
0
104
943
1.19
0.62
6.0
5.9
55.08
56.05
%
0.39
99
916
73
642
1.20
0.61
1.5
1.4
3.95
2.50
u/ml
0.16
17
181
29
229
1.31
0.61
1.3
1.4
—
—
—
0
0
19
140
1.39
0.60
1.3
1.2
—
—
—
0
0
0
20
0.00
0.60
0.0
1.5
—
—
—
0
0
0
20
0.00
0.60
0.0
1.5
—
—
—
0
0
0
20
0.00
0.60
0.0
1.5
—
—
—
0
0
0
20
0.00
0.60
0.0
1.5
—
—
—
0
0
53
452
1.23
0.60
1.8
1.8
0.78
0.93
mg/l
0.24
35
338
44
520
0.81
0.59
3.9
4.1
—
—
—
0
0
0
23
0.00
0.58
0.0
1.6
—
0.53
—
0
23
0
23
0.00
0.58
0.0
1.1
—
—
—
0
0
17
124
1.40
0.57
3.7
5.2
0.00
0.09
%
—
8
22
6
36
1.68
0.57
3.0
2.2
—
—
—
0
0
14
99
1.44
0.55
4.6
2.4
11.94
5.69
iu/ml
—
8
22
64
564
1.19
0.52
2.9
3.3
0.00
0.00
estimate
0.50
19
224
39
460
0.82
0.51
2.6
2.5
—
—
estimate
—
0
0
10
67
1.52
0.50
1.4
1.2
—
—
—
0
0
19
146
1.33
0.49
1.1
1.2
—
—
—
0
0
203
1978
1.29
0.46
11.7
11.2
18.07
19.19
mg/l
0.20
165
1555
7
49
1.44
0.46
1.4
1.1
—
—
—
0
0
39
452
0.83
0.44
1.5
1.6
—
—
—
0
0
49
556
0.85
0.43
2.8
3.1
2.34
2.35
mmol/l
0.11
44
523
75
822
0.87
0.42
2.8
2.9
0.00
0.01
estimate
0.80
16
195
116
1086
1.14
0.42
2.9
3.3
0.00
0.00
estimate
-0.00
19
218
0
15
0.00
0.41
0.0
18.6
—
6.54
—
0
10
0
15
0.00
0.41
0.0
1.6
—
—
—
0
0
103
961
1.13
0.38
6.3
6.0
31.05
30.07
%
0.42
97
928
17
134
1.29
0.38
3.8
5.0
0.50
0.92
%
—
8
33
20
244
0.80
0.37
1.5
1.6
64.07
62.23
ug/l
0.06
20
213
74
678
1.14
0.36
1.9
1.8
103.36
96.80
pmol/l
0.58
39
375
6
42
1.44
0.36
1.0
1.8
—
—
—
0
0
12
156
0.76
0.36
7.6
8.0
104.42
105.03
mmol/l
0.23
12
156
39
341
1.17
0.35
3.2
3.7
—
—
—
0
0
6
44
1.37
0.34
1.0
1.1
—
—
—
0
0
75
812
0.88
0.34
1.9
1.8
—
—
—
0
0
60
544
1.14
0.34
2.5
2.1
—
—
—
0
0
37
420
0.86
0.33
1.6
1.6
750.05
955.80
mu/l
1.25
30
362
50
554
0.87
0.33
5.1
5.7
—
—
—
0
0
106
999
1.12
0.32
6.2
6.1
0.53
0.52
e9/l
0.37
97
885
28
240
1.19
0.32
1.8
2.3
—
—
—
0
0
114
1080
1.11
0.31
2.9
3.2
60.00
0.00
estimate
0.48
22
231
7
99
0.70
0.31
10.1
8.8
—
—
—
0
0
49
541
0.88
0.30
2.8
2.7
13.49
50.70
e6/l
1.93
39
395
106
1003
1.11
0.29
6.2
6.1
0.04
0.04
e9/l
0.21
97
887
20
237
0.83
0.29
1.5
1.3
235.36
140.49
u/ml
—
5
100
112
1066
1.10
0.27
2.9
3.2
0.00
0.00
estimate
-0.00
20
233
12
148
0.80
0.25
1.0
1.1
—
—
—
0
0
9
75
1.21
0.25
1.0
1.4
—
—
—
0
0
5
40
1.26
0.22
1.0
1.2
—
—
—
0
0
5
42
1.19
0.21
1.2
1.2
—
—
—
0
0
0
11
0.00
0.21
0.0
8.3
—
8.04
—
0
11
0
11
0.00
0.21
0.0
1.2
—
27.91
—
0
11
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
0
12
0.00
0.21
0.0
1.8
—
44.33
—
0
12
0
12
0.00
0.21
0.0
1.2
—
77.36
—
0
7
0
14
0.00
0.20
0.0
1.4
—
0.00
—
0
14
6
50
1.21
0.20
1.2
1.2
—
—
—
0
0
6
50
1.21
0.20
1.5
1.3
—
—
—
0
0
23
259
0.88
0.20
2.8
2.3
2.15
4.16
e6/l
1.37
13
119
6
51
1.18
0.19
1.0
1.6
3.63
3.45
mmol/l
—
6
51
12
100
1.21
0.18
7.6
1.7
—
—
—
0
0
7
58
1.21
0.18
1.0
13.1
—
—
—
0
0
109
1051
1.07
0.17
6.2
6.6
0.19
0.18
e9/l
0.21
101
948
7
63
1.11
0.17
1.9
1.3
—
—
—
0
0
24
216
1.12
0.16
1.4
1.6
—
—
—
0
0
9
81
1.12
0.15
1.1
1.5
—
—
—
0
0
84
872
0.94
0.14
2.8
2.9
6.29
6.23
ph
0.25
46
495
110
1130
0.95
0.12
8.5
9.1
4.28
3.93
e9/l
0.53
99
986
19
172
1.11
0.12
5.4
1.5
—
—
—
0
0
95
976
0.95
0.10
3.0
2.7
—
—
estimate
—
0
0
17
154
1.11
0.10
10.4
2.0
—
—
—
0
0
22
203
1.09
0.10
1.4
1.4
—
—
—
0
0
22
204
1.09
0.09
4.8
1.7
—
—
—
0
0
31
328
0.94
0.09
1.8
2.1
—
—
—
0
0
6
58
1.04
0.08
2.3
2.0
—
—
—
0
0
18
166
1.09
0.08
4.1
7.5
0.96
1.03
mmol/l
0.51
18
150
25
235
1.07
0.07
2.2
3.5
0.85
0.82
mmol/l
0.45
25
224
10
112
0.89
0.07
1.2
1.3
—
—
—
0
0
8
78
1.03
0.07
2.5
5.0
24.38
24.16
mmol/l
—
8
78
10
89
1.13
0.07
2.1
1.6
0.27
0.40
nmol/l
—
10
76
63
647
0.96
0.06
2.3
2.6
0.00
0.01
estimate
0.80
16
189
23
217
1.07
0.06
1.3
1.4
—
—
—
0
0
106
1042
1.03
0.06
6.3
6.1
2.23
1.99
e9/l
0.44
98
951
59
576
1.03
0.05
1.8
1.4
1.94
2.05
g/l
0.22
34
374
30
288
1.05
0.04
3.6
2.6
918.31
208.16
ng/l
0.35
16
130
39
378
1.04
0.04
3.3
4.4
4.59
12.72
mg/mmol
1.17
26
245
21
220
0.95
0.03
2.1
1.7
—
—
—
0
0
13
123
1.06
0.01
1.2
1.2
—
—
—
0
0
45
458
0.98
0.01
2.5
2.5
0.12
0.28
e6/l
1.36
33
320
13
124
1.05
0.00
1.2
1.1
1.42
1.57
g/l
1.19
13
124
37
376
0.98
0.00
2.9
3.7
23.33
82.59
mg/l
2.27
24
254
18
179
1.01
0.00
2.0
3.3
—
—
—
0
0
22
219
1.01
0.00
4.8
1.7
—
—
—
0
0
22
221
0.99
0.00
4.8
1.7
—
—
—
0
0
65
651
1.00
0.00
1.9
1.9
—
—
—
0
0
12
116
1.04
0.00
6.1
13.1
7.48
7.42
ph
—
6
71
13
125
1.04
0.00
1.2
1.1
0.93
0.86
g/l
0.43
13
125
22
222
0.99
0.00
4.9
1.7
—
—
—
0
0
5
56
0.89
0.00
1.6
4.7
0.56
0.58
%
—
5
56
0
5
0.00
0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
0.00
0.0
2.2
—
1569.00
—
0
5
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
9
94
0.96
-0.00
1.2
1.3
—
1.94
—
0
5
0
7
0.00
-0.00
0.0
1.3
—
39.67
—
0
7
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
3.0
—
17.70
—
0
9
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.0
—
7.79
—
0
9
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.3
—
63.89
—
0
9
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
5
53
0.94
-0.00
1.0
2.6
10.60
10.24
mg/l
—
5
48
0
6
0.00
-0.00
0.0
1.8
—
59.17
—
0
6
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.9
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
2.9
—
41.63
—
0
8
0
8
0.00
-0.00
0.0
5.8
—
8.75
—
0
8
0
8
0.00
-0.00
0.0
1.0
—
34.95
—
0
8

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: VWXY20_CONTACT_W_HYPODE_NEEDLE – Contact with hypodermic needle

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).