Accidental poisoning by and exposure to pesticides

VWXY20_ACCIDENTAL_POISO_EXPOS_PESTI

No definition available.

Endpoint definition

↥

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps	FinnGen
Phenotype data	557745
1. Apply sex-specific rule None	557745
2. Check conditions None	557745
3. Check pre-conditions, main-only, mode, registry filters Registry filters: Hospital discharge: ICD-10 — X48 Cause of death: ICD-10 — X48 2 out of 7 registries used, show all original rules.	92
4. Check minimum number of events None	92
5. Include endpoints None	92
6. Filter based on genotype QC (FinnGen only)	83

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy: 5
First used in FinnGen datafreeze: DF4
Parent code in ICD-10: X40-X49

NAME	VWXY20_ACCIDENTAL_POISO_EXPOS_PESTI
CONTROL_EXCLUDE
CONTROL_PRECONDITIONS
CONTROL_CONDITIONS
SEX
INCLUDE
PRE_CONDITIONS
CONDITIONS
OUTPAT_ICD
OUTPAT_OPER
HD_MAINONLY
HD_ICD_10_ATC
HD_ICD_10	X48
HD_ICD_9
HD_ICD_8
HD_ICD_10_EXCL
HD_ICD_9_EXCL
HD_ICD_8_EXCL
COD_MAINONLY
COD_ICD_10	X48
COD_ICD_9
COD_ICD_8
COD_ICD_10_EXCL
COD_ICD_9_EXCL
COD_ICD_8_EXCL
OPER_NOM
OPER_HL
OPER_HP1
OPER_HP2
KELA_REIMB
KELA_REIMB_ICD
KELA_ATC_NEEDOTHER
KELA_ATC
KELA_VNRO_NEEDOTHER
KELA_VNRO
CANC_TOPO
CANC_TOPO_EXCL
CANC_MORPH
CANC_MORPH_EXCL
CANC_BEHAV

Similar endpoints

↥

List of similar endpoints to Accidental poisoning by and exposure to pesticides based on the number of shared cases.

Similar with more cases:

Similar with less cases:

None

Case counts by codes

↥

FinnGen case counts by registry codes:

Upset plot

Full data table

Summary Statistics

↥

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

	All	Female	Male
Number of individuals	83	53	30
Unadjusted period prevalence (%)	0.02	0.02	0.01
Median age at first event (years)	53.53	49.63	60.41

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

↥

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log₁₀(p-value) ≥ 6.

Matched cohort

Matched cases
87: Matched controls
870

Code

Vocabulary

Description

Odds Ratio

-log₁₀(p)

N matched cases

N matched controls

X48

ICD-10 Finland

Accidental poisoning by and exposure to pesticides

+∞

125.3

C01CA24

ATC

epinephrine; parenteral

26.2

46.3

X49

ICD-10 Finland

Accidental poisoning by and exposure to other and unspecified chemicals and noxious substances

550.0

36.9

T78.3

ICD-10 Finland

Angioneurotic oedema

157.6

31.0

T78.4

ICD-10 Finland

Allergy, unspecified

26.3

18.2

Z51.6

ICD-10 Finland

Desensitization to allergens

59.9

16.8

T63.4

ICD-10 Finland

Toxic effect: Venom of other arthropods

55.9

15.8

ZXD31

NOMESCO Finland

Major difficulties in performing procedure

29.7

13.1

T78.2

ICD-10 Finland

Anaphylactic shock, unspecified

54.9

12.3

R06AE09

ATC

levocetirizine; oral

5.3

10.4

J45.0

ICD-10 Finland

Predominantly allergic asthma

6.3

9.9

Z3231

NOMESCO Finland

Registered nurse

4.1

9.8

166

R03DC03

ATC

montelukast; oral

4.3

8.4

XQ800

NOMESCO Finland

Prick test

7.3

7.9

J30.10

ICD-10 Finland

Allergic rhinitis due to pollen

8.8

7.3

ZXE00

NOMESCO Finland

One hour or less

3.3

6.8

264

H02AB06

ATC

prednisolone; systemic

3.3

6.6

309

J45.9

ICD-10 Finland

Asthma, unspecified

3.6

6.4

T62.0

ICD-10 Finland

Toxic effect: Ingested mushrooms

+∞

6.3

LabWAS

↥

N Cases

N Controls

-log₁₀(p)

cases

controls

cases

controls

unit

-log₁₀(p)

N cases

N controls

(3000492) Spirometry study

3.87

6.66

1.9

1.3

—

(3018095) Leukocytes [#/volume] in Urine

306

2.74

4.97

6.6

3.9

23.06

79.40

e6/l

1.58

216

(3030306) Epithelial cells.non-squamous [#/volume] in Urine by Automated count

146

2.61

4.05

4.6

2.7

0.91

1.10

e6/l

0.15

(43054903) Holo-transcobalamin II [Moles/volume] in Serum

357

2.47

3.96

2.1

91.82

98.49

pmol/l

0.41

188

(3030467) Casts [#/volume] in Urine by Automated count

234

2.42

3.93

4.9

3.0

0.35

0.41

e6/l

0.15

171

(3029879) Epithelial cells.squamous [#/volume] in Urine by Automated count

134

2.61

3.89

4.8

2.8

1.38

2.65

e6/l

—

(3018418) pH of Serum or Plasma

246

2.37

3.76

6.2

4.5

7.38

7.40

1.35

171

(3013650) Neutrophils [#/volume] in Blood by Automated count

458

2.50

3.54

13.1

11.8

3.77

3.91

e9/l

0.29

396

(3001604) Monocytes [#/volume] in Blood

408

2.39

3.51

6.7

6.9

0.55

0.57

e9/l

0.39

353

(3006315) Basophils [#/volume] in Blood

409

2.38

3.48

6.7

7.0

0.04

e9/l

0.01

353

(3013115) Eosinophils [#/volume] in Blood

422

2.36

3.38

7.1

7.3

0.22

0.18

e9/l

0.65

371

(3002582) Erythrocytes [#/volume] in Urine

277

2.19

3.19

4.8

3.1

12.70

266.66

e6/l

0.56

211

(3008486) Thyroxine (T4) free [Moles/volume] in Serum or Plasma

592

2.93

3.16

5.2

4.6

14.80

14.70

pmol/l

0.12

551

(3019198) Lymphocytes [#/volume] in Blood

420

2.26

3.11

6.9

1.92

1.81

e9/l

0.58

371

(3003458) Phosphate [Moles/volume] in Serum or Plasma

107

2.41

2.89

7.2

6.7

1.07

1.04

mmol/l

0.24

(42870588) Differential panel, method unspecified - Blood

271

2.06

2.75

6.9

6.4

—

(3001334) Neutrophil cytoplasmic Ab [Units/volume] in Serum

3.39

2.53

1.1

1.3

—

(40768443) Skin Pathology biopsy report

3.08

2.45

1.1

1.3

—

(3021589) Normoblasts [#/volume] in Blood

338

1.94

2.35

11.0

12.3

0.00

e9/l

-0.00

269

(3003740) Influenza virus B Ag [Presence] in Specimen

4.87

2.31

1.3

1.2

—

(3002523) Influenza virus A Ag [Presence] in Specimen

4.87

2.31

1.3

1.2

—

(36031861) Influenza virus A and B and SARS-CoV-2 (COVID-19) and Respiratory syncytial virus RNA panel - Respiratory system specimen by NAA with probe detection

2.74

2.30

1.8

1.6

—

(3000991) Gas panel - Venous blood

2.38

2.13

14.3

8.7

—

(3013527) Hepatitis B virus core IgM Ab [Presence] in Serum

4.21

2.07

2.0

1.3

—

(3003191) Choriogonadotropin [Presence] in Serum or Plasma

3.16

1.99

1.9

1.8

—

(3024891) Influenza virus A+B Ag [Presence] in Specimen

3.04

1.91

1.4

1.3

—

(3049717) Cytology report of Urine Cyto stain

3.08

1.76

4.6

3.3

—

(3002032) Base excess in Venous blood by calculation

2.23

1.76

6.4

4.4

1.91

1.49

mmol/l

0.17

(706163) SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection

515

1.81

1.66

3.9

3.2

—

(3031040) Bacteria [#/volume] in Urine by Automated count

505

1.79

1.64

8.8

4.5

—

63.60

—

(3012544) pH of Venous blood

2.13

1.59

6.4

4.3

7.37

7.38

—

(3006418) Campylobacter sp identified in Tissue by Organism specific culture

2.73

1.55

1.0

1.2

—

(3014765) Yersinia sp identified in Stool by Organism specific culture

2.73

1.55

1.0

1.2

—

(42529406) Shigella sp [Presence] in Stool by Culture

2.73

1.55

1.0

1.2

—

(3044290) Cell count panel - Cerebral spinal fluid

3.47

1.54

1.2

1.4

—

(40768797) Stomach Pathology biopsy report

120

1.87

1.51

1.1

1.2

—

(40758558) Short blood count panel - Blood

258

1.67

1.49

7.0

6.9

—

(3043362) Influenza virus B Ag [Presence] in Nasopharynx by Immunoassay

2.85

1.46

1.0

1.5

—

(3046524) Influenza virus A Ag [Presence] in Nasopharynx by Immunoassay

2.85

1.46

1.0

1.5

—

(3003694) ABO and Rh group [Type] in Blood

224

1.68

1.44

1.5

—

(46237023) Hepatitis B virus core and surface Ab and surface Ag panel - Serum

2.53

1.42

2.1

1.2

—

(3043924) Respiratory syncytial virus RNA [Identifier] in Specimen by NAA with probe detection

100

1.87

1.36

2.1

1.6

—

(3038288) Influenza virus B RNA [Presence] in Specimen by NAA with probe detection

1.88

1.32

2.2

1.7

—

(3024561) Albumin [Mass/volume] in Serum or Plasma

340

1.60

1.31

8.1

4.4

36.20

36.05

g/l

0.09

325

(1002224) Polysomnography panel

2.16

1.31

1.1

—

(40768804) Tissue Pathology biopsy report

322

1.59

1.29

2.7

2.0

—

(3026008) Bacteria identified in Urine by Culture

230

1.62

1.28

5.4

2.7

—

(3002256) Pathology report gross observation

102

1.83

1.28

1.1

1.2

—

(46236098) ABO and Rh group [Type] in Blood by Confirmatory method

195

1.64

1.26

3.2

2.4

—

(3001122) Ferritin [Mass/volume] in Serum or Plasma

383

1.56

1.22

3.4

3.0

104.18

94.57

ug/l

0.17

362

(3023419) Bacteria identified in Sputum by Culture

2.59

1.16

2.0

—

(3021614) Rheumatoid factor [Units/volume] in Serum or Plasma

173

1.62

1.15

1.4

1.3

8.23

27.03

iu/ml

—

(3041942) Cyclic citrullinated peptide Ab [Units/volume] in Serum

166

1.62

1.10

1.4

1.3

1.54

10.16

u/ml

—

(40764999) Glomerular filtration rate [Volume Rate/Area] in Serum, Plasma or Blood by Creatinine-based formula (CKD-EPI)/1.73 sq M

736

2.08

1.10

23.9

15.4

84.31

82.83

ml/min/173m2

0.22

688

(3051552) Clostridioides difficile toxin genes [Presence] in Stool by NAA with probe detection

2.11

1.09

1.8

1.4

—

(3022948) Iron [Moles/volume] in Serum or Plasma

133

1.65

1.06

2.8

2.6

13.89

13.05

umol/l

0.18

125

(3044938) Influenza virus A RNA [Presence] in Specimen by NAA with probe detection

133

1.65

1.06

2.3

1.8

—

(3023368) Bacteria identified in Blood by Culture

194

1.57

1.06

6.0

4.7

—

(3025941) Bacteria identified in Stool by Culture

2.02

1.06

1.1

1.2

—

(3014791) Apolipoprotein B [Mass/volume] in Serum or Plasma

2.09

1.02

1.3

1.2

0.86

0.85

g/l

—

(3050380) Cytology report of Cervical or vaginal smear or scraping Cyto stain

0.00

0.99

0.0

1.5

—

(40763571) Iron/Transferrin [Ratio] in Serum or Plasma

119

1.65

0.98

2.7

25.03

21.87

0.27

111

(3000620) Complement C3 [Mass/volume] in Serum or Plasma

2.22

0.93

1.3

1.21

1.23

g/l

—

(3017766) Complement C4 [Mass/volume] in Serum or Plasma

2.22

0.93

1.3

0.21

0.24

g/l

—

(3022145) Colonoscopy Study observation

1.70

0.91

2.1

1.4

—

(3004716) Salmonella sp identified in Stool by Organism specific culture

1.86

0.87

1.1

1.4

—

(43534045) MCM6 gene c.-13910C>T and -13915T>G [Identifier] in Blood or Tissue by Molecular genetics method Nominal

1.86

0.87

1.0

—

(40768793) Breast Pathology biopsy report

0.00

0.80

0.0

1.5

—

(3013512) EKG study

268

0.67

0.79

3.6

3.9

—

(3008364) Apolipoprotein A-I [Mass/volume] in Serum or Plasma

1.82

0.78

1.3

1.2

1.48

1.63

g/l

—

(3007164) IgA [Mass/volume] in Serum or Plasma

189

1.45

0.76

1.2

1.4

2.10

2.47

g/l

0.48

115

(3005785) Creatine kinase.MB [Mass/volume] in Serum or Plasma

1.68

0.75

1.8

2.3

2.20

5.33

ug/l

—

(3000067) Parathyrin.intact [Mass/volume] in Serum or Plasma

1.61

0.72

9.0

4.3

120.11

79.14

ng/l

—

(3012095) Magnesium [Moles/volume] in Serum or Plasma

146

1.48

0.72

4.5

3.0

0.79

0.82

mmol/l

0.89

138

(3021879) Hepatitis B virus core Ab [Presence] in Serum

1.72

0.72

1.9

1.5

—

(3048929) Epstein Barr virus Ab [Presence] in Serum

1.98

0.72

1.4

1.2

—

(3044640) Blood type and Crossmatch panel - Blood

256

1.40

0.72

3.0

2.5

—

(3012516) Albumin [Mass/volume] in Urine

238

1.40

0.70

4.0

3.4

17.29

55.23

mg/l

1.55

151

(3048773) Triglyceride [Moles/volume] in Serum or Plasma --fasting

731

1.65

0.67

3.8

4.2

1.33

1.27

mmol/l

0.27

684

(3020460) C reactive protein [Mass/volume] in Serum or Plasma

765

1.85

0.66

22.6

14.9

16.46

22.82

mg/l

2.17

624

(3016879) Cocaine [Presence] in Urine

1.77

0.65

2.2

1.6

—

(3007566) Smooth muscle Ab [Titer] in Serum

0.00

0.61

0.0

1.3

—

106.00

—

(3006588) Cancer Ag 15-3 [Units/volume] in Serum or Plasma

0.00

0.60

0.0

3.0

—

47.61

—

(3034770) Mitochondria Ab [Titer] in Serum

0.00

0.60

0.0

1.3

—

(3051714) Fibrin D-dimer FEU [Mass/volume] in Platelet poor plasma

188

1.38

0.60

1.9

0.60

1.55

mg/l

1.57

147

(3016293) Bicarbonate [Moles/volume] in Serum or Plasma

1.53

0.59

21.8

6.3

25.93

24.92

mmol/l

—

(3013721) Aspartate aminotransferase [Enzymatic activity/volume] in Serum or Plasma

274

1.33

0.57

3.3

3.2

26.24

31.02

u/l

0.83

257

(3019902) Methicillin resistant Staphylococcus aureus [Presence] in Specimen by Organism specific culture

1.56

0.56

2.9

3.6

—

(3027945) Reticulocytes/Erythrocytes in Blood

0.58

0.56

8.2

3.2

2.45

1.82

—

(40763086) Leukocyte esterase [Presence] in Urine by Automated test strip

293

0.75

0.52

3.7

3.6

0.00

estimate

—

(3015736) pH of Urine

317

1.29

0.50

5.5

3.3

6.13

6.18

0.08

171

(3001019) Free T4 and TSH panel - Serum or Plasma

1.57

0.50

1.4

1.6

—

(3024135) Streptococcus.beta-hemolytic [Presence] in Throat by Organism specific culture

157

1.36

0.49

1.5

—

(3014576) Chloride [Moles/volume] in Serum or Plasma

103

1.43

0.49

14.0

6.7

105.57

104.26

mmol/l

0.77

103

(3045783) Sodium and Potassium panel [Moles/volume] - Serum or Plasma

0.58

0.48

10.0

7.6

—

(40761511) CBC panel - Blood by Automated count

787

1.73

0.48

13.8

13.1

—

(3011371) Neisseria gonorrhoeae DNA [Presence] in Specimen by NAA with probe detection

1.47

0.47

1.7

—

(3019550) Sodium [Moles/volume] in Serum or Plasma

778

1.60

0.45

26.0

17.2

139.85

139.78

mmol/l

0.11

769

(3004588) Protein electrophoresis panel - Serum or Plasma

1.50

0.44

1.6

2.2

—

(3000764) Benzodiazepines [Presence] in Urine

1.65

0.44

2.2

1.6

—

(3027944) Amphetamines [Presence] in Urine

1.60

0.43

2.4

1.5

—

(3016251) Hemoglobin.gastrointestinal [Presence] in Stool

1.60

0.43

2.8

2.1

—

(42868674) Cholesterol in HDL/Cholesterol.total [Molar ratio] in Serum or Plasma

105

0.64

0.42

4.0

4.5

31.86

32.54

—

(3001079) Blood group antibody screen [Presence] in Serum or Plasma

372

1.25

0.42

3.6

2.7

—

estimate

—

(3027008) Opiates [Presence] in Urine

1.55

0.42

2.2

1.5

—

(3000515) Antithrombin actual/normal in Platelet poor plasma by Chromogenic method

1.55

0.42

1.6

2.3

98.60

95.00

—

(3026725) Estradiol (E2) [Moles/volume] in Serum or Plasma

0.00

0.41

0.0

1.7

—

0.17

—

(1761482) Bacteria [#/volume] in Urine by Culture

0.00

0.41

0.0

5.0

—

(3028300) Cannabinoids [Presence] in Urine

1.50

0.41

2.2

1.6

—

(3024980) IgG subclass 4 [Mass/volume] in Serum

0.00

0.41

0.0

1.5

—

0.69

—

(3000494) Fungus identified in Specimen by Culture

1.38

0.40

1.5

1.6

—

(3005013) Prostate Specific Ag Free [Mass/volume] in Serum or Plasma

153

1.31

0.40

3.9

3.1

0.77

0.85

ug/l

0.21

(3029937) Albumin [Presence] in Urine by Test strip

221

0.77

0.40

4.4

3.7

0.00

estimate

—

(3020682) Albumin/Creatinine [Ratio] in Urine

248

1.25

0.39

4.4

3.9

4.87

8.71

mg/mmol

0.62

152

(586526) SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection

1.41

0.39

1.6

1.3

—

(3022250) Lactate dehydrogenase [Enzymatic activity/volume] in Serum or Plasma by Lactate to pyruvate reaction

1.39

0.38

5.3

5.9

227.00

236.78

u/l

0.25

(3019060) Gas panel - Arterial blood

1.46

0.36

1.3

3.9

—

(3023103) Potassium [Moles/volume] in Serum or Plasma

780

1.56

0.34

26.5

17.3

3.94

3.96

mmol/l

0.31

770

(3001784) Prostate Specific Ag Free/Prostate specific Ag.total in Serum or Plasma

185

1.25

0.33

5.9

5.2

19.32

22.27

0.42

(3019832) Treponema pallidum Ab [Presence] in Serum

1.35

0.32

1.3

1.7

—

(3013139) Helicobacter pylori Ag [Presence] in Stool

1.35

0.32

1.3

1.2

—

(3019800) Troponin T.cardiac [Mass/volume] in Serum or Plasma

284

1.20

0.29

3.8

4.1

14.82

37.20

ng/l

1.86

190

(3003031) Transferrin.carbohydrate deficient.disialo/Transferrin.total in Serum or Plasma

1.31

0.28

2.5

2.4

1.34

1.37

0.06

(3009261) Glucose [Presence] in Urine by Test strip

414

1.18

0.27

5.3

3.8

0.00

estimate

—

(4010399) Spirometry for bronchospasm with prolonged evaluation after bronchodilator

1.28

0.27

2.0

1.4

—

(36660697) Celiac disease serology panel - Serum

1.22

0.26

1.6

1.1

—

(3008898) HLA-B27 [Presence]

1.30

0.23

1.0

1.1

—

(3023602) Cholesterol in HDL [Moles/volume] in Serum or Plasma

770

1.28

0.22

4.9

1.41

1.50

mmol/l

1.34

725

(3035350) Ketones [Presence] in Urine by Test strip

409

1.15

0.22

5.4

3.7

0.00

17.28

estimate

—

(1617658) Protocol used for examination of sentinel lymph nodes

0.00

0.21

0.0

1.0

—

(3040151) Glucose [Moles/volume] in Capillary blood

0.00

0.21

0.0

15.6

—

6.99

—

(3028531) Enolase.neuron specific [Mass/volume] in Serum or Plasma

0.00

0.21

0.0

1.3

—

16.63

—

(3009595) Pneumocystis jirovecii DNA [Presence] in Specimen by NAA with probe detection

0.00

0.21

0.0

1.8

—

(3003265) Liver kidney microsomal Ab [Titer] in Serum by Immunofluorescence

0.00

0.21

0.0

1.3

—

(3032773) Endomysium IgG Ab [Titer] in Serum

0.00

0.21

0.0

1.0

—

(40763082) Lactate dehydrogenase [Enzymatic activity/volume] in Pleural fluid by Lactate to pyruvate reaction

0.00

0.21

0.0

1.1

—

282.37

—

(3039162) Centromere protein B Ab [Units/volume] in Serum

0.00

0.21

0.0

1.3

—

(40768795) Lymph node Pathology biopsy report

0.00

0.21

0.0

1.1

—

(21492888) Glucose tolerance 2 hours gestational panel - Serum or Plasma

0.00

0.21

0.0

1.3

—

(42529215) Follitropin [Units/volume] in Serum or Plasma by Immunoassay

0.00

0.20

0.0

1.9

—

22.39

—

(3019977) pH of Arterial blood

1.25

0.20

12.6

6.8

7.41

7.42

—

(43054914) Glucose tolerance 2 hours panel - Serum or Plasma

1.27

0.20

1.6

1.9

—

(3009035) Cobalamin (Vitamin B12) [Moles/volume] in Serum or Plasma

152

0.83

0.18

2.8

1.8

459.15

456.55

pmol/l

0.01

133

(3006093) Chlamydia trachomatis DNA [Presence] in Specimen by NAA with probe detection

1.16

0.18

2.0

1.8

—

(4035726) Immunohistochemistry procedure

0.71

0.17

1.2

1.3

—

(3025839) Triglyceride [Moles/volume] in Serum or Plasma

345

1.13

0.16

2.1

1.9

1.51

1.33

mmol/l

0.22

301

(3021601) Nitrite [Presence] in Urine by Test strip

405

1.12

0.16

5.4

3.7

0.00

estimate

—

(3017732) Neutrophils [#/volume] in Blood

0.82

0.14

2.5

3.5

4.54

6.72

e9/l

—

(3019900) Cholesterol [Moles/volume] in Serum or Plasma

773

1.24

0.14

5.3

5.0

4.66

4.67

mmol/l

0.04

731

(3024950) Chlamydia trachomatis DNA [Presence] in Urine by NAA with probe detection

0.81

0.14

2.4

2.1

—

(3018006) Microscopic observation [Identifier] in Cervix by Cyto stain.thin prep

132

1.16

0.14

1.5

1.4

—

(3032080) INR in Blood by Coagulation assay

328

1.11

0.14

26.7

13.4

1.43

1.23

inr

0.84

265

(3027801) Oxygen [Partial pressure] in Arterial blood

1.19

0.14

12.6

6.5

14.68

12.66

kpa

0.44

(3027946) Carbon dioxide [Partial pressure] in Arterial blood

1.19

0.14

12.6

6.5

5.14

5.13

kpa

0.02

(46235355) HIV 1 and 2 tests - Meaningful Use set

162

1.14

0.13

2.0

1.9

—

(3005772) Bilirubin.conjugated [Moles/volume] in Serum or Plasma

1.20

0.13

7.6

3.1

3.65

6.55

umol/l

—

(3017143) Hepatitis C virus Ab [Presence] in Serum

1.18

0.12

2.3

1.6

—

(3009343) pH of Capillary blood

1.12

0.09

1.7

3.3

7.44

7.43

—

(3045414) Leukocytes [Presence] in Urine

0.81

0.08

2.5

1.8

—

0.00

estimate

—

(21494755) Public health laboratory ask at order entry panel

0.85

0.07

1.1

1.3

—

(3033319) Streptococcus pyogenes Ag [Presence] in Throat

0.85

0.07

2.1

1.5

—

(3042936) Bacteria identified in Isolate by Culture

130

1.09

0.05

1.9

2.0

—

(3007853) Bacteria identified in Skin by Aerobe culture

1.11

0.04

1.8

1.6

—

(3019284) Hepatitis B virus surface Ag [Presence] in Serum

138

0.93

0.02

2.1

1.6

—

(1761868) Lipid panel - Serum or Plasma

331

1.00

0.00

2.8

3.1

—

(40760892) CBC W Ordered Manual Differential panel - Blood

186

1.03

0.00

5.3

5.9

—

(3046870) Tissue transglutaminase IgG Ab [Units/volume] in Serum

0.96

0.00

1.0

1.1

—

(3014007) Fractional oxyhemoglobin in Arterial blood

0.98

0.00

25.2

9.7

96.00

94.93

—

(3037534) Parathyrin related protein [Mass/volume] in Serum or Plasma

0.00

-0.00

0.0

1.2

—

61.10

—

(40758895) Direct antiglobulin test.complement C3d specific reagent [Presence] on Red Blood Cells

0.00

-0.00

0.0

1.4

—

(3028192) IgG subclass 2 [Mass/volume] in Serum

0.00

-0.00

0.0

1.2

—

3.12

—

(3011363) Streptococcus pneumoniae Ag [Presence] in Urine

0.00

-0.00

0.0

1.0

—

(3012202) Varicella zoster virus DNA [Presence] in Specimen by NAA with probe detection

0.00

-0.00

0.0

1.4

—

(3052649) Adenosine deaminase [Enzymatic activity/volume] in Serum or Plasma

0.00

-0.00

0.0

1.2

—

12.83

—

(3027135) IgG subclass 1 [Mass/volume] in Serum

0.00

-0.00

0.0

1.2

—

6.59

—

(3029075) Extractable nuclear Ab panel - Serum

0.00

-0.00

0.0

1.0

—

(3004451) EKG impression Narrative

0.00

-0.00

0.0

1.5

—

(4062490) Immunoglobulin typing, IgG

0.00

-0.00

0.0

1.2

—

(3027831) CD3-CD16+CD56+ (Natural killer) cells/cells in Blood

0.00

-0.00

0.0

3.0

—

8.00

—

(3004915) Chlamydophila pneumoniae IgA Ab [Units/volume] in Serum

0.00

-0.00

0.0

1.2

—

(40760847) Basement membrane Ab [Titer] in Serum by Immunofluorescence

0.00

-0.00

0.0

1.7

—

(3037692) Legionella sp identified in Specimen by Organism specific culture

0.00

-0.00

0.0

1.3

—

(3036185) Alkaline phosphatase.liver 2 [Enzymatic activity/volume] in Serum or Plasma

0.00

-0.00

0.0

1.0

—

26.20

—

(3035947) Staphylolysin Ab [Units/volume] in Serum

0.00

-0.00

0.0

1.4

—

(3013201) Beta-2-Microglobulin [Mass/volume] in Serum or Plasma

0.00

-0.00

0.0

1.4

—

4.94

—

(40766800) Mycobacterium tuberculosis stimulated gamma interferon release by CD4+ T-cells [Units/volume] corrected for background in Blood

0.00

-0.00

0.0

1.0

—

(4211845) Urine protein measurement

0.00

-0.00

0.0

1.9

—

(44790047) Parainfluenza type 1 nucleic acid detection

0.00

-0.00

0.0

1.8

—

(3000208) Alpha tocopherol [Moles/volume] in Serum or Plasma

0.00

-0.00

0.0

1.4

—

35.29

—

(3003510) Neisseria gonorrhoeae DNA [Presence] in Urine by NAA with probe detection

0.92

-0.00

2.0

—

(3045156) Carbon dioxide [Partial pressure] adjusted to patient's actual temperature in Arterial blood

0.00

-0.00

0.0

3.4

—

4.59

—

(3030558) Cytomegalovirus DNA [Units/volume] (viral load) in Specimen by NAA with probe detection

0.00

-0.00

0.0

1.7

—

(3006922) Hepatitis E virus Ab [Presence] in Serum

0.00

-0.00

0.0

1.0

—

(3041354) Potassium [Moles/volume] in Venous blood

0.00

-0.00

0.0

3.5

—

3.95

—

(3033705) Calcium.ionized [Moles/volume] in Venous blood

0.00

-0.00

0.0

3.5

—

1.21

—

(1002102) Choriogonadotropin.intact+Beta subunit [Mass/volume] in Serum or Plasma

0.00

-0.00

0.0

1.6

—

50.04

—

(3019601) Blood group antibody investigation [Interpretation] in Plasma or RBC

0.00

-0.00

0.0

1.3

—

(3000924) Streptococcus pyogenes [Presence] in Throat by Organism specific culture

0.00

-0.00

0.0

1.4

—

(3021197) Magnesium Ionized [Moles/volume] in Serum or Plasma

0.00

-0.00

0.0

2.4

—

0.62

—

(44806118) Parainfluenza type 4 nucleic acid detection

0.00

-0.00

0.0

1.8

—

(3036481) Cortisol [Moles/volume] in Serum or Plasma

0.98

-0.00

2.4

1.9

278.57

387.23

nmol/l

—

(3022803) Oxygen [Partial pressure] adjusted to patient's actual temperature in Arterial blood

0.00

-0.00

0.0

3.4

—

9.80

—

(3008757) Leukocyte morphology finding [Identifier] in Blood

0.00

-0.00

0.0

3.8

—

(3021236) Streptolysin O Ab [Units/volume] in Serum or Plasma

0.00

-0.00

0.0

1.4

—

78.61

—

(3040363) Hepatitis A virus IgG Ab [Presence] in Serum by Immunoassay

0.00

-0.00

0.0

1.0

—

(40768806) Pleura Pathology biopsy report

0.00

-0.00

0.0

2.3

—

(42870308) Desmosome IgG Ab [Titer] in Serum by Immunofluorescence

0.00

-0.00

0.0

1.7

—

(3030136) 5-Hydroxyindoleacetate [Moles/volume] in Serum or Plasma

0.00

-0.00

0.0

2.2

—

57.20

—

(3016724) Homocysteine [Moles/volume] in Serum or Plasma

0.00

-0.00

0.0

1.7

—

11.43

—

(42529200) Cancer Ag 15-3 [Units/volume] in Serum or Plasma by Immunoassay

0.00

-0.00

0.0

4.1

—

33.11

—

(40758897) Direct antiglobulin test.IgG specific reagent [Presence] on Red Blood Cells

0.00

-0.00

0.0

1.4

—

(3006462) Nitrate [Presence] in Urine

0.00

-0.00

0.0

2.0

—

(21493690) Lymphocyte T-cell and B-cell and Natural killer subsets panel - Blood

0.00

-0.00

0.0

3.2

—

(36033641) SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Rapid immunoassay

0.00

-0.00

0.0

1.5

—

(3036428) Adenosine deaminase [Enzymatic activity/volume] in Pleural fluid

0.00

-0.00

0.0

1.0

—

8.71

—

(3035062) Alkaline phosphatase.liver 1 [Enzymatic activity/volume] in Serum or Plasma

0.00

-0.00

0.0

1.0

—

75.20

—

(40768441) Liver Pathology biopsy report

0.00

-0.00

0.0

1.3

—

(44816752) ERBB2 gene copy number/nucleus in Tissue by FISH

0.00

-0.00

0.0

1.1

—

(3013005) Retinol [Moles/volume] in Serum or Plasma

0.00

-0.00

0.0

1.5

—

1.88

—

(44790049) Parainfluenza type 3 nucleic acid detection

0.00

-0.00

0.0

1.8

—

(44806420) Estimation of glomerular filtration rate

0.00

-0.00

0.0

1.8

—

(44790048) Parainfluenza type 2 nucleic acid detection

0.00

-0.00

0.0

1.8

—

(21494890) Protein electrophoresis panel - 24 hour Urine

0.00

-0.00

0.0

1.7

—

(3024139) IgG subclass 3 [Mass/volume] in Serum

0.00

-0.00

0.0

1.2

—

0.38

—

(3035285) Chloride [Moles/volume] in Venous blood

0.00

-0.00

0.0

3.5

—

106.00

—

(3014702) Chromogranin A [Moles/volume] in Serum or Plasma

0.00

-0.00

0.0

2.0

—

3.13

—

(3008536) Aspergillus sp Ab [Presence] in Serum

0.00

-0.00

0.0

1.5

—

Mortality – FinRegistry

↥

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

↥

Index endpoint: VWXY20_ACCIDENTAL_POISO_EXPOS_PESTI – Accidental poisoning by and exposure to pesticides

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

≡ Risteys

R14

FinnGen R13 + FinRegistry

FinnGen R12 + FinRegistry

FinnGen R11 + FinRegistry

FinnGen R10 + FinRegistry

FinnGen R10

FinnGen R9

FinnGen R8

FinnGen R7

FinnGen R6

FinnGen R5

FinnGen R4

FinnGen R3

Accidental poisoning by and exposure to pesticides

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

2. Check conditions

3. Check pre-conditions, main-only, mode, registry filters

4. Check minimum number of events

5. Include endpoints

6. Filter based on genotype QC (FinnGen only)

All original rules

Similar endpoints

Case counts by codes

Upset plot

Case counts by code for Accidental poisoning by and exposure to pesticides (VWXY20_ACCIDENTAL_POISO_EXPOS_PESTI)

Summary Statistics

-FinRegistry-

-FinnGen-

Key figures

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

CodeWAS

Matched cohort

LabWAS

Mortality – FinRegistry

Relationships between endpoints