This is a non-core endpoint: only basic statistics are computed.
See these related core endpoints for full statistics:
Squamous cell neoplasms and carcinoma of rectum
C3_RECTUM_SQUAM
No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
557745 |
1. Apply sex-specific ruleNone |
557745 |
2. Check conditionsNone |
557745 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
1 out of 7 registries used, show all original rules. |
49 |
4. Check minimum number of eventsNone |
49 |
5. Include endpointsNone |
49 |
6. Filter based on genotype QC (FinnGen only) |
42 |
Control definitions (FinnGen only)
- Control exclude
- C3_CANCER, C3_CANCER_WIDE
Extra metadata
- First used in FinnGen datafreeze
- DF8
Similar endpoints
↥List of similar endpoints to
Squamous cell neoplasms and carcinoma of rectum
based on the number of shared cases.
Similar with more cases:
- Colorectal cancer
- Colorectal cancer, including Hilmo
- Malignant neoplasm of digestive organs
- Malignant neoplasm of digestive organs, including Hilmo
- Solid cancers
Similar with less cases:
None
Case counts by codes
↥Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 42 | 34 | 8 |
| Unadjusted period prevalence (%) | 0.01 | 0.01 | 0.00 |
| Median age at first event (years) | 64.54 | 62.35 | 73.84 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
No data available
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
35
23
64.98
45.09
3.2
1.5
2.09
2.99
ug/l
0.78
27
17
37
162
8.19
8.59
8.3
4.1
35.86
36.49
g/l
0.44
37
153
20
56
5.63
7.32
2.6
3.1
0.80
0.83
mmol/l
0.51
20
51
19
60
4.75
5.87
2.6
3.0
2.88
4.65
e6/l
—
8
28
36
203
4.85
5.16
13.6
6.0
3.35
4.03
e9/l
0.88
31
173
24
101
3.95
4.90
3.6
2.9
0.07
0.55
e6/l
2.01
17
73
36
215
4.36
4.49
10.5
3.8
7.86
9.63
umol/l
2.39
36
201
26
123
3.64
4.34
3.9
3.2
—
—
—
0
0
26
132
3.30
3.73
8.1
2.0
2.33
2.36
mmol/l
0.58
26
117
18
75
3.33
3.53
2.3
2.7
0.71
1.08
e6/l
—
8
42
29
163
3.19
3.40
3.6
2.5
—
—
estimate
—
0
0
19
85
3.14
3.29
2.5
2.1
—
—
—
0
0
9
24
4.42
2.85
1.0
1.3
—
—
—
0
0
13
53
3.04
2.55
6.2
7.3
105.69
104.28
mmol/l
0.53
13
53
10
35
3.38
2.39
1.7
2.0
—
—
—
0
0
8
25
3.66
2.22
6.1
9.6
24.83
25.77
mmol/l
—
8
25
10
39
3.00
2.10
1.7
2.0
—
—
—
0
0
7
21
3.75
2.06
8.0
7.4
16.40
15.27
%
—
7
21
17
92
2.36
1.89
1.9
1.4
—
—
—
0
0
11
51
2.53
1.67
2.3
1.9
—
—
—
0
0
7
26
2.99
1.66
5.4
11.3
0.80
1.37
%
—
7
26
7
26
2.99
1.66
5.4
11.2
0.40
0.61
%
—
7
26
6
20
3.30
1.64
1.2
1.2
—
—
—
0
0
14
74
2.29
1.61
4.9
2.0
2.46
2.44
mmol/l
0.19
14
61
5
15
3.61
1.56
1.6
1.8
—
—
—
0
0
9
39
2.63
1.54
6.6
8.7
112.44
122.90
g/l
—
9
39
20
137
1.83
1.10
2.5
2.8
22.00
28.84
u/l
1.36
20
127
19
130
1.80
1.04
4.6
2.2
53.26
56.61
u/l
0.20
19
119
6
31
2.08
0.88
1.2
1.2
—
106.70
u/ml
—
0
13
27
220
1.57
0.69
2.8
2.7
—
—
—
0
0
23
185
1.50
0.59
2.6
2.0
87.97
96.16
pmol/l
0.46
12
74
36
321
1.61
0.53
36.8
16.9
13.85
13.67
%
0.42
36
315
13
171
0.66
0.53
3.8
4.1
15.14
22.07
ng/l
—
7
114
0
11
0.00
0.21
0.0
1.5
—
—
—
0
0
0
11
0.00
0.21
0.0
1.4
—
—
—
0
0
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
0
12
0.00
0.21
0.0
1.7
—
—
—
0
0
0
12
0.00
0.21
0.0
1.6
—
—
—
0
0
38
393
0.79
0.19
4.7
5.7
5.68
5.95
mmol/l
1.37
32
362
36
373
0.83
0.17
3.6
4.8
1.27
1.27
mmol/l
0.01
31
340
25
230
1.20
0.17
7.0
5.0
6.62
6.74
mmol/l
0.13
25
216
5
47
1.07
0.10
5.2
5.7
—
—
—
0
0
10
113
0.85
0.09
1.7
2.2
298.30
319.19
umol/l
—
10
94
40
390
1.23
0.09
4.0
5.9
5.11
4.71
mmol/l
1.73
35
362
40
388
1.28
0.09
4.0
5.7
1.64
1.57
mmol/l
0.53
35
356
16
151
1.09
0.04
1.5
2.1
100.06
131.06
u/l
0.48
16
143
11
103
1.09
0.02
1.4
1.8
4.26
0.81
mg/l
1.09
11
88
40
397
1.07
0.00
4.4
6.7
2.99
2.70
mmol/l
1.36
35
365
0
8
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.8
—
816.60
—
0
5
38
374
1.10
-0.00
5.4
5.9
1.98
1.94
mu/l
0.06
33
341
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
38
382
0.97
-0.00
4.4
7.5
36.93
40.07
mmol/mol
2.60
32
358
0
8
0.00
-0.00
0.0
1.0
—
—
—
0
0
7
68
1.03
-0.00
1.7
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: C3_RECTUM_SQUAM – Squamous cell neoplasms and carcinoma of rectum
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).