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Burn and corrosion of other internal organs

ST19_BURN_CORROSION_OTHER_INTERNAL_ORGANS

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 T28
  • Cause of death: ICD-10 T28

2 out of 7 registries used, show all original rules.

124

4. Check minimum number of events

None

124

5. Include endpoints

None

124

6. Filter based on genotype QC (FinnGen only)

118

Control definitions (FinnGen only)

Control exclude
CD2_BENIGN_FEMALE_GEN_OTH

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
T2[6-8]
Name in latin
Combustiones et corrosiones ahiorum organorum internorum

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 118 57 61
Unadjusted period prevalence (%) 0.02 0.02 0.03
Median age at first event (years) 44.12 40.41 47.60

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
120
Matched controls
1200
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
T28.6
ICD-10 Finland
Corrosion of oesophagus
+∞
65.8
57
*
T28.5
ICD-10 Finland
Corrosion of mouth and pharynx
+∞
36.3
33
*
T36
ICD-10 Finland
Poisoning by systemic antibiotics
14.4
28.7
29
26
X69
ICD-10 Finland
Intentional self-poisoning by and exposure to other and unspecified chemicals and noxious substances
28.5
25.8
35
17
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
6.7
24.8
69
201
X49
ICD-10 Finland
Accidental poisoning by and exposure to other and unspecified chemicals and noxious substances
296.8
24.6
24
*
T28.0
ICD-10 Finland
Burn of mouth and pharynx
+∞
18.2
17
*
F32.9
ICD-10 Finland
Depressive episode, unspecified
5.6
16.1
39
95
T54.3
ICD-10 Finland
Toxic effect: Corrosive alkalis and alkali-like substances
+∞
16.0
15
*
WX892
NOMESCO Finland
Monitored bed care
8.1
15.5
23
34
GD1UA
NOMESCO Finland
Thorax X-ray examination outside radiological department
5.5
14.9
36
87
N05AH04
ATC
quetiapine; oral
4.6
14.2
47
147
F10.1
ICD-10 Finland
Mental and behavioural disorders due to use of alcohol, Harmful use
6.4
14.2
27
52
N05AH03
ATC
olanzapine; systemic
6.4
13.7
26
50
K22.2
ICD-10 Finland
Oesophageal obstruction
56.6
13.2
15
*
N05AF03
ATC
chlorprothixene; systemic
20.9
12.5
18
10
GD1QA
NOMESCO Finland
Supine thorax X-ray examination
4.9
12.2
33
87
N05BA04
ATC
oxazepam; oral
3.9
11.5
50
187
N03AG01
ATC
valproic acid; systemic, rectal
6.0
10.8
21
41
X59
ICD-10 Finland
Exposure to unspecified factor
3.9
10.6
42
146
F32.2
ICD-10 Finland
Severe depressive episode without psychotic symptoms
5.5
10.2
22
47
N05AX08
ATC
risperidone; systemic
4.8
10.1
26
65
F32.3
ICD-10 Finland
Severe depressive episode with psychotic symptoms
28.8
10.0
13
5
ZXD05
NOMESCO Finland
Urgent procedure
3.4
9.9
53
224
AA1AD
NOMESCO Finland
CT of head and brain
3.5
9.5
47
188
112
Kela drug reimbursment
Severe psychotic and other severe mental disorders
5.3
9.5
21
46
UJC12
NOMESCO Finland
Flexible oesophagoscopy
40.0
9.2
11
*
N03AX16
ATC
[U] pregabalin
3.5
8.8
39
145
JDB10
NOMESCO Finland
Percutaneous gastrostomy
30.0
8.6
11
*
UGC12
NOMESCO Finland
Flexible bronchoscopy
5.4
8.4
18
38
N06AX11
ATC
mirtazapine; oral
3.0
8.3
60
297
S01.0
ICD-10 Finland
Open wound of scalp
5.1
8.2
19
43
JDW98
NOMESCO Finland
Other transluminal endoscopic operation on stomach or duodenum
24.0
8.2
11
5
F60.30
ICD-10 Finland
Emotionally unstable personality disorder, impulsive
12.0
8.0
14
13
N05BA01
ATC
diazepam; systemic, rectal
3.8
7.7
27
85
A02BC05
ATC
esomeprazole; systemic
2.9
7.7
62
322
S06.0
ICD-10 Finland
Concussion
4.0
7.4
24
71
F10.26
ICD-10 Finland
Alcohol dependence periodic alcoholism
17.1
7.4
11
7
Z91.5
ICD-10 Finland
Personal history of self-harm
+∞
7.4
7
*
T28.3
ICD-10 Finland
Burn of internal genitourinary organs
+∞
7.4
7
*
Z00.4
ICD-10 Finland
General psychiatric examination, not elsewhere classified
3.9
7.1
24
73
N07BB01
ATC
disulfiram; oral
6.6
6.9
17
29
A02BC02
ATC
pantoprazole; systemic
3.1
6.9
91
602
N05CF01
ATC
zopiclone; oral
2.8
6.7
48
230
X58
ICD-10 Finland
Exposure to other specified factors
3.3
6.7
30
110
X44
ICD-10 Finland
Accidental poisoning by and exposure to other and unspecified drugs, medicaments and biological substances
13.3
6.7
11
9
Z76.9
ICD-10 Finland
Person encountering health services in unspecified circumstances
3.9
6.7
22
66
F33.9
ICD-10 Finland
Recurrent depressive disorder, unspecified
6.2
6.6
17
31
F10.29
ICD-10 Finland
Addiction caused by alcohol UNS
9.0
6.5
13
16
504
Kela drug reimbursment
Conditions requiring daily forced enteral nutrition
15.4
6.5
10
7
F10.00
ICD-10 Finland
Alcohol-related acute intoxication uncomplicated
12.0
6.4
11
10
TJD20
NOMESCO Finland
Change of gastrostomy tube
+∞
6.3
6
*
WX872
NOMESCO Finland
Intensive care
7.4
6.2
14
21
F99
ICD-10 Finland
Mental disorder, not otherwise specified
13.5
6.2
10
8
F60.9
ICD-10 Finland
Personality disorder, unspecified
16.1
6.0
9
6
F60.31
ICD-10 Finland
Emotionally unstable personality disorder, borderline condition
16.1
6.0
9
6
Z53.2
ICD-10 Finland
Procedure not carried out because of patient's decision for other and unspecified reasons
16.1
6.0
9
6

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
55
233
3.51
10.28
6.2
4.5
—
—
—
0
0
38
137
3.60
8.96
1.9
1.7
988.55
1235.61
nmol/l
1.14
33
101
89
565
3.23
7.57
11.6
5.5
6.31
6.56
mmol/l
0.76
84
531
28
92
3.67
7.48
10.3
14.0
2.90
0.52
mmol/l
1.85
23
83
27
94
3.42
6.57
10.8
13.8
7.40
7.42
ph
0.69
19
62
55
295
2.60
6.06
6.3
2.3
—
—
—
0
0
70
424
2.56
5.94
15.1
14.3
1.15
1.20
inr
0.59
61
355
27
103
3.09
5.62
10.4
8.1
103.19
104.31
mmol/l
0.50
27
103
17
48
3.96
5.56
9.1
11.6
26.07
23.74
mmol/l
1.19
17
48
43
221
2.47
5.02
1.6
1.6
1.37
1.40
mg/l
0.02
36
174
69
438
2.35
4.99
5.6
2.8
—
—
estimate
—
0
0
19
65
3.28
4.69
9.8
9.6
1.20
1.46
mmol/l
0.47
19
65
47
261
2.32
4.55
4.0
4.1
7.40
7.40
ph
0.38
38
187
23
90
2.92
4.54
4.3
2.4
0.19
0.23
g/l
1.53
23
82
16
50
3.54
4.52
5.4
12.8
—
—
—
0
0
60
370
2.24
4.52
2.5
2.0
95.94
97.50
pmol/l
0.10
42
194
14
41
3.73
4.33
2.7
2.3
—
—
—
0
0
11
25
4.73
3.73
7.7
3.3
7.41
7.41
ph
0.10
11
25
24
110
2.48
3.48
3.5
1.6
—
—
—
0
0
14
48
3.17
3.43
12.6
11.7
0.76
0.67
%
0.30
14
48
14
48
3.17
3.43
5.9
6.6
26.86
23.98
mmol/l
1.26
14
48
17
66
2.84
3.38
10.6
10.1
—
—
—
0
0
57
375
1.99
3.36
6.1
3.5
59.79
30.99
ng/l
0.35
44
242
26
126
2.36
3.34
3.9
2.5
—
—
—
0
0
6
8
7.82
3.09
13.7
10.6
0.65
0.45
mmol/l
—
6
8
14
52
2.92
3.01
12.6
10.6
1.74
1.51
%
0.24
14
52
17
72
2.59
2.88
12.5
2.7
—
—
—
0
0
15
61
2.67
2.74
9.0
2.7
—
—
—
0
0
12
43
2.99
2.73
1.6
2.7
28.05
24.05
mmol/l
2.08
12
43
17
74
2.51
2.73
12.5
2.1
—
—
—
0
0
49
325
1.86
2.69
8.3
5.4
—
—
—
0
0
15
62
2.62
2.66
1.6
1.5
0.28
0.30
mg/l
—
8
31
27
147
2.08
2.60
1.9
1.8
—
—
—
0
0
17
76
2.44
2.58
2.2
4.0
7.38
7.39
ph
0.13
12
46
5
7
7.39
2.57
1.4
1.0
4.38
5.97
mmol/l
—
5
7
16
71
2.45
2.47
13.2
2.6
—
—
—
0
0
8
22
3.82
2.41
1.3
1.2
—
—
—
0
0
5
8
6.46
2.39
1.0
1.4
—
—
—
0
0
20
101
2.18
2.32
1.9
1.8
—
—
—
0
0
7
18
4.06
2.29
9.1
2.6
5.00
4.89
kpa
—
7
18
7
18
4.06
2.29
9.1
2.6
9.34
8.50
kpa
—
7
18
24
133
2.01
2.20
1.5
1.3
—
—
—
0
0
16
76
2.28
2.14
13.3
2.5
—
—
—
0
0
16
76
2.28
2.14
13.3
2.5
—
—
—
0
0
21
112
2.06
2.13
2.1
1.7
—
—
—
0
0
9
32
2.96
2.05
16.7
3.8
—
—
—
0
0
106
933
2.17
2.01
6.2
5.6
37.71
38.79
mmol/mol
0.61
101
881
7
21
3.47
2.00
5.4
2.0
3.77
3.94
mmol/l
—
7
21
12
54
2.36
1.80
10.4
4.1
—
—
—
0
0
39
269
1.67
1.76
3.9
2.7
—
—
—
0
0
17
90
2.04
1.76
3.5
5.0
0.00
0.29
%
—
6
21
6
19
3.27
1.68
4.5
3.4
—
—
—
0
0
5
14
3.68
1.63
2.8
1.8
—
—
—
0
0
5
15
3.43
1.54
2.2
1.9
12.40
10.26
mmol/l
—
5
15
5
15
3.43
1.54
7.4
1.5
93.22
92.21
%
—
5
15
31
210
1.64
1.48
1.9
1.8
—
—
—
0
0
5
16
3.21
1.45
7.8
1.7
1.66
1.57
mmol/l
—
5
16
42
308
1.56
1.45
1.7
1.5
—
—
—
0
0
42
310
1.55
1.40
4.6
3.8
0.00
0.02
estimate
0.50
15
115
82
700
1.54
1.37
5.9
4.2
—
—
—
0
0
0
37
0.00
1.37
0.0
1.1
—
—
—
0
0
60
483
1.48
1.31
2.9
2.8
113.01
105.33
ug/l
0.16
55
450
37
271
1.53
1.26
2.2
2.2
—
—
—
0
0
13
71
1.93
1.25
2.2
3.3
71.35
73.52
e9/l
—
8
49
16
94
1.81
1.25
3.7
4.9
0.17
0.92
%
—
6
26
16
94
1.81
1.25
2.9
5.5
0.00
0.38
%
—
5
21
26
176
1.61
1.24
6.1
2.9
802.70
107.33
ng/l
0.41
20
122
5
19
2.70
1.23
7.8
3.2
17.80
17.18
%
—
5
19
5
19
2.70
1.23
1.0
1.0
—
—
—
0
0
15
87
1.83
1.22
3.8
5.1
0.33
0.61
%
—
6
23
71
597
1.46
1.21
18.7
9.2
4.21
4.02
e9/l
0.24
65
531
5
21
2.44
1.10
1.0
1.1
—
—
—
0
0
5
22
2.33
1.04
18.2
7.2
—
—
—
0
0
13
76
1.80
1.03
6.5
4.2
1.21
1.22
mmol/l
0.34
13
62
0
30
0.00
0.99
0.0
1.2
—
—
—
0
0
66
563
1.38
0.96
4.7
3.7
83.94
0.00
estimate
0.48
16
122
34
260
1.43
0.92
6.7
3.7
1.02
1.02
kg/l
0.11
27
181
14
87
1.69
0.92
1.1
1.1
—
—
—
0
0
43
344
1.39
0.91
3.8
3.0
0.00
0.00
estimate
-0.00
11
95
109
1023
1.71
0.90
37.2
13.0
20.73
22.00
mg/l
0.22
98
828
6
30
2.05
0.88
1.3
2.6
26.50
25.34
mmol/l
—
6
30
8
45
1.83
0.86
2.9
1.8
—
—
—
0
0
8
135
0.56
0.79
1.0
1.3
—
—
—
0
0
40
324
1.35
0.77
3.6
3.1
16.36
234.96
e6/l
0.60
31
259
34
269
1.37
0.76
1.4
1.3
0.87
0.87
u/ml
0.00
12
79
9
55
1.69
0.75
1.2
1.3
—
—
—
0
0
111
1055
1.69
0.75
34.1
12.6
—
—
—
0
0
53
450
1.32
0.74
4.5
3.4
0.00
0.04
estimate
0.68
14
102
5
26
1.96
0.71
1.0
1.3
—
—
—
0
0
5
26
1.96
0.71
1.0
1.1
458.00
449.23
mg/l
—
5
26
65
571
1.30
0.70
5.0
3.7
0.00
0.00
estimate
-0.00
16
114
7
43
1.67
0.68
4.1
2.9
0.79
0.71
%
—
7
43
41
340
1.31
0.67
5.6
3.4
9.57
8.69
mmol/l
0.36
35
298
52
447
1.29
0.65
4.9
3.4
6.43
6.17
ph
0.99
35
272
0
20
0.00
0.61
0.0
3.6
—
49.90
—
0
20
11
160
0.66
0.60
1.4
1.5
—
—
—
0
0
0
21
0.00
0.60
0.0
1.8
—
—
—
0
0
44
375
1.27
0.58
4.2
3.7
14.90
57.51
e6/l
1.14
31
275
37
310
1.28
0.55
9.6
5.1
—
—
—
0
0
7
47
1.52
0.48
1.9
2.6
—
0.00
estimate
—
0
19
24
193
1.30
0.48
3.6
2.5
469.62
548.49
mosm/kgh2o
1.16
24
171
62
559
1.23
0.48
4.6
3.7
0.00
0.00
estimate
-0.00
16
120
7
51
1.40
0.45
7.1
2.1
—
—
—
0
0
41
464
0.82
0.41
3.2
3.0
—
—
—
0
0
51
456
1.21
0.41
25.0
11.4
0.00
0.00
e9/l
0.71
45
380
5
34
1.49
0.41
2.4
2.6
—
—
—
0
0
17
212
0.77
0.40
2.7
2.7
0.69
0.77
ug/l
—
9
110
8
112
0.69
0.39
1.4
1.7
—
—
—
0
0
5
36
1.41
0.38
2.0
2.1
—
—
—
0
0
32
275
1.22
0.38
3.6
2.8
0.75
0.30
e6/l
0.41
24
211
111
1075
1.43
0.37
39.0
17.1
71.72
76.51
umol/l
1.67
111
1062
101
971
1.25
0.34
6.4
4.6
5.89
5.83
mmol/l
0.14
96
908
43
387
1.17
0.31
1.8
2.0
—
—
—
0
0
28
243
1.20
0.30
3.6
2.7
7.52
5.83
e6/l
0.36
28
225
8
63
1.29
0.28
1.1
1.2
—
20.10
—
0
5
14
169
0.81
0.26
1.6
1.9
—
—
—
0
0
24
272
0.85
0.24
5.9
4.6
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
6
47
1.29
0.21
1.5
1.2
—
—
—
0
0
0
14
0.00
0.20
0.0
1.6
—
—
—
0
0
98
954
1.15
0.18
5.0
4.1
1.50
1.32
mmol/l
1.14
92
898
8
71
1.14
0.16
2.0
2.4
—
11.63
—
0
6
102
998
1.15
0.15
5.1
4.8
1.39
1.43
mmol/l
0.41
97
941
10
114
0.87
0.10
1.5
1.2
—
—
—
0
0
7
67
1.05
0.08
1.0
1.2
—
—
—
0
0
25
237
1.07
0.06
1.5
1.4
2.10
2.72
g/l
0.69
17
147
11
121
0.90
0.06
1.4
1.4
—
—
—
0
0
29
303
0.94
0.06
2.8
4.2
2.31
9.44
mg/mmol
2.60
19
203
29
301
0.95
0.04
2.9
3.4
242.45
63.98
mg/l
0.37
19
204
11
113
0.97
0.00
1.2
1.5
—
—
—
0
0
18
183
0.98
0.00
1.6
1.4
5.42
6.96
u/ml
—
6
71
10
95
1.06
0.00
5.1
3.4
—
—
—
0
0
0
8
0.00
-0.00
0.0
3.9
—
10.18
—
0
8
0
5
0.00
-0.00
0.0
1.6
—
69.00
—
0
5
0
7
0.00
-0.00
0.0
1.4
—
9.57
—
0
7
0
5
0.00
-0.00
0.0
1.0
—
10.48
—
0
5
0
7
0.00
-0.00
0.0
1.1
—
1.80
—
0
7
0
8
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.8
—
5.73
—
0
6
0
6
0.00
-0.00
0.0
1.0
—
280.67
—
0
6
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.8
—
2.92
—
0
6
0
7
0.00
-0.00
0.0
10.6
—
15.93
—
0
7
0
5
0.00
-0.00
0.0
1.6
—
58.20
—
0
5
0
5
0.00
-0.00
0.0
1.4
—
125.60
—
0
5
8
82
0.97
-0.00
1.8
1.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.8
—
1.00
—
0
6

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: ST19_BURN_CORROSION_OTHER_INTERNAL_ORGANS – Burn and corrosion of other internal organs

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).