No definition available.
Congenital malformations of lung, including avohilmo
Q17_CONGEN_MALFO_LUNG_WIDE
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
557745 |
1. Apply sex-specific ruleNone |
557745 |
2. Check conditionsNone |
557745 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
3 out of 7 registries used, show all original rules. |
115 |
4. Check minimum number of eventsNone |
115 |
5. Include endpointsNone |
115 |
6. Filter based on genotype QC (FinnGen only) |
103 |
Control definitions (FinnGen only)
- Control exclude
- Q17_CONGEN_MALFO_RESPI_SYSTEM
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF13
- Parent code in ICD-10
- Q3[0-4]
- Name in latin
- Malformationes congenitae pulmonis/pulmonum
Similar endpoints
↥List of similar endpoints to
Congenital malformations of lung, including avohilmo
based on the number of shared cases.
Similar with more cases:
- Congenital malformations of the respiratory system, including avohilmo
- Congenital malformations, deformations and chromosomal abnormalities, including avohilmo
- Any operation in hilmo
- Any prescribed medicine buy
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 103 | 58 | 45 |
| Unadjusted period prevalence (%) | 0.02 | 0.02 | 0.02 |
| Median age at first event (years) | 44.64 | 47.95 | 40.38 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
No data
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 110
- Matched controls
- 1100
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
R91
ICD-10 Finland
Abnormal findings on diagnostic imaging of lung
14.8
37.1
40
41
Q33.2
ICD-10 Finland
Sequestration of lung
+∞
29.5
27
*
Q33.08
ICD-10 Finland
Congenital cystic lung
+∞
24.9
23
*
Q33.4
ICD-10 Finland
Congenital bronchiectasis
+∞
17.1
16
*
J18.9
ICD-10 Finland
Pneumonia, unspecified
4.9
14.5
46
141
UGC12
NOMESCO Finland
Flexible bronchoscopy
11.8
13.9
26
28
J47
ICD-10 Finland
Bronchiectasis
30.4
13.9
18
7
Q33.6
ICD-10 Finland
Hypoplasia and dysplasia of lung
+∞
12.7
12
*
GD1AA
NOMESCO Finland
Thorax X-ray examination
3.9
11.2
67
314
Q33.9
ICD-10 Finland
Congenital malformation of lung, unspecified
+∞
10.6
10
*
J15.9
ICD-10 Finland
Bacterial pneumonia, unspecified
5.7
9.7
20
41
Q33.00
ICD-10 Finland
Solitary congenital cyst in the lungs
+∞
9.5
9
*
GD1UA
NOMESCO Finland
Thorax X-ray examination outside radiological department
4.0
8.5
29
90
R03AC02
ATC
salbutamol; inhalant
3.6
8.5
81
480
XG412
NOMESCO Finland
Flow-volume spirometry with bronchospasmolysis
6.9
8.2
20
34
GD1BD
NOMESCO Finland
Thorax extensive CT-examination
7.7
8.0
18
27
GDC00
NOMESCO Finland
Lobectomy of lung
85.6
7.5
8
*
Q34.1
ICD-10 Finland
Congenital cyst of mediastinum
+∞
7.4
7
*
Q33.80
ICD-10 Finland
Congenital [cystic] adenomatoid malformation of lung
+∞
7.4
7
*
GD1AD
NOMESCO Finland
Thorax CT examination
8.3
6.7
14
19
UGC02
NOMESCO Finland
Rigid bronchoscopy
28.5
6.3
8
*
J22
ICD-10 Finland
Unspecified acute lower respiratory infection
4.4
6.3
17
44
J01MA14
ATC
moxifloxacin; systemic
4.2
6.2
18
49
R96
ICPC
Asthma
4.3
6.1
17
45
J45.9
ICD-10 Finland
Asthma, unspecified
3.1
6.0
30
118
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
14
24
6.52
5.75
3.3
1.8
—
—
—
0
0
9
17
5.66
3.59
1.4
1.4
—
—
—
0
0
8
13
6.54
3.57
1.0
1.4
—
—
—
0
0
12
32
4.08
3.51
1.3
1.8
—
—
—
0
0
12
34
3.83
3.32
1.2
1.7
—
—
—
0
0
68
486
2.05
3.23
3.6
3.7
0.00
0.00
estimate
-0.00
14
84
53
348
2.01
3.19
3.8
3.1
0.18
0.00
estimate
0.47
11
75
35
203
2.06
2.92
2.1
2.6
1.77
1.07
mg/l
0.24
23
162
63
449
1.94
2.91
6.2
10.4
1.22
1.22
mmol/l
0.03
57
408
66
478
1.95
2.90
3.6
3.7
0.00
0.00
estimate
-0.00
14
90
10
28
3.82
2.86
1.5
1.5
—
—
—
0
0
45
288
1.95
2.84
2.4
2.8
10.02
37.58
ng/l
2.29
24
169
66
481
1.93
2.82
3.6
3.7
0.00
0.00
estimate
-0.00
11
91
6
11
5.70
2.58
1.3
1.9
—
—
—
0
0
5
8
6.48
2.39
4.0
3.3
—
—
—
0
0
5
9
5.76
2.23
1.2
1.0
—
—
—
0
0
7
19
3.86
2.19
1.7
1.5
—
—
—
0
0
7
19
3.86
2.19
1.7
1.4
—
—
—
0
0
6
14
4.47
2.18
1.3
1.7
—
—
—
0
0
6
14
4.47
2.18
1.8
1.6
—
—
—
0
0
33
207
1.85
2.13
3.2
3.3
1.02
1.02
kg/l
0.55
20
137
7
20
3.66
2.09
1.6
1.6
—
—
—
0
0
7
20
3.66
2.09
1.3
1.6
—
—
—
0
0
8
26
3.23
2.06
1.5
1.4
—
—
—
0
0
10
39
2.72
2.00
1.3
1.3
—
—
—
0
0
20
108
2.04
1.98
2.4
2.0
—
—
—
0
0
16
79
2.20
1.97
2.5
3.2
—
—
—
0
0
28
171
1.86
1.95
1.8
3.3
0.83
0.91
e6/l
0.06
16
85
21
117
1.98
1.91
8.5
18.6
25.72
24.87
mmol/l
0.60
21
117
24
141
1.90
1.88
2.5
2.0
—
—
—
0
0
83
694
1.80
1.88
4.9
4.2
9.62
9.73
mm/h
0.03
78
656
33
218
1.73
1.77
2.5
2.6
—
—
—
0
0
6
18
3.46
1.77
1.5
1.2
—
—
—
0
0
36
245
1.70
1.74
2.5
3.6
0.00
0.00
estimate
-0.00
12
87
59
459
1.62
1.68
4.5
8.1
17.97
13.09
umol/l
0.44
54
443
25
158
1.75
1.55
2.0
3.8
4.58
1.90
e6/l
0.60
13
73
14
74
2.02
1.47
1.5
1.5
—
—
—
0
0
6
22
2.82
1.45
1.3
1.5
—
—
—
0
0
54
425
1.53
1.38
3.1
2.9
—
—
estimate
—
0
0
5
17
3.03
1.37
1.4
1.1
—
—
—
0
0
15
84
1.91
1.35
5.6
14.3
0.33
1.06
mmol/l
0.43
15
71
5
18
2.86
1.30
1.6
3.2
—
—
—
0
0
5
18
2.86
1.30
1.0
1.1
—
—
—
0
0
18
110
1.76
1.25
2.5
2.0
—
—
—
0
0
5
19
2.71
1.23
1.6
1.6
—
—
—
0
0
5
19
2.71
1.23
1.6
1.6
—
—
—
0
0
17
103
1.77
1.21
2.4
10.2
23.78
23.80
mmol/l
0.01
17
103
48
379
1.47
1.16
4.0
5.6
37.79
36.60
g/l
0.66
42
365
25
173
1.58
1.10
3.6
3.8
49.94
306.58
ng/l
1.51
17
120
70
602
1.45
1.04
9.8
10.8
3.96
3.84
e9/l
0.17
63
517
13
77
1.78
1.00
2.7
7.0
—
—
—
0
0
35
267
1.46
0.98
3.6
3.6
0.16
0.35
e6/l
0.77
28
189
90
817
1.56
0.98
12.5
13.0
89.63
88.85
ml/min/173m2
0.15
83
742
9
51
1.83
0.97
2.0
13.0
0.81
1.56
%
—
9
51
17
112
1.61
0.91
4.2
13.0
106.53
104.06
mmol/l
1.33
17
112
8
48
1.72
0.80
1.0
1.1
—
3.22
—
0
5
33
263
1.36
0.71
3.7
2.6
0.00
0.00
estimate
—
9
71
5
27
1.89
0.69
3.4
2.8
28.00
7.79
e6/l
—
5
19
8
50
1.65
0.63
1.0
1.2
—
—
—
0
0
8
52
1.58
0.61
8.5
20.4
0.65
0.64
%
—
8
52
0
21
0.00
0.60
0.0
1.9
—
—
—
0
0
0
22
0.00
0.60
0.0
2.8
—
0.00
—
0
22
0
22
0.00
0.60
0.0
2.8
—
0.00
—
0
22
0
22
0.00
0.60
0.0
1.1
—
—
—
0
0
8
53
1.55
0.60
8.5
20.1
0.99
1.55
%
—
8
53
0
23
0.00
0.59
0.0
2.7
—
0.00
—
0
23
11
158
0.66
0.58
1.8
1.6
—
—
—
0
0
80
741
1.29
0.53
3.7
3.8
—
—
—
0
0
30
355
0.79
0.48
2.1
2.0
84.51
101.12
pmol/l
1.03
12
172
25
302
0.78
0.47
1.5
1.6
18.76
2.50
u/ml
—
5
78
22
176
1.31
0.46
1.2
1.3
1.32
2.90
u/ml
—
8
74
5
32
1.59
0.43
1.2
4.9
24.46
23.50
mmol/l
—
5
32
33
282
1.24
0.42
1.6
1.8
—
—
—
0
0
8
61
1.34
0.40
1.4
1.8
—
—
—
0
0
23
191
1.26
0.37
1.3
1.3
19.30
26.72
iu/ml
—
8
56
6
46
1.32
0.33
7.8
5.5
3.63
3.41
g/l
—
6
46
21
246
0.82
0.30
4.9
4.1
9.23
77.90
mg/mmol
0.46
11
154
5
72
0.68
0.27
1.0
1.1
—
—
—
0
0
5
37
1.37
0.24
1.4
1.4
0.23
0.22
g/l
—
5
37
5
38
1.33
0.23
1.8
1.6
—
0.01
—
0
7
5
38
1.33
0.23
1.4
1.4
1.06
1.13
g/l
—
5
38
50
465
1.14
0.23
2.5
3.0
99.10
91.54
ug/l
0.17
45
446
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
0
10
0.00
0.21
0.0
1.6
—
—
—
0
0
0
10
0.00
0.21
0.0
1.2
—
—
—
0
0
0
10
0.00
0.21
0.0
1.6
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
0
12
0.00
0.21
0.0
1.2
—
104.13
—
0
12
0
13
0.00
0.21
0.0
1.0
—
—
—
0
0
0
14
0.00
0.20
0.0
2.4
—
0.80
—
0
5
13
153
0.83
0.19
3.6
2.3
—
—
—
0
0
36
387
0.90
0.17
2.0
2.0
1.20
1.34
mmol/l
0.53
31
341
18
159
1.16
0.16
4.4
3.9
19.72
22.81
%
0.66
11
62
11
129
0.84
0.15
1.8
2.0
1.27
1.39
%
0.34
11
121
23
208
1.13
0.15
4.1
4.4
1.38
1.64
ug/l
0.49
23
185
87
849
1.12
0.13
4.6
4.2
5.54
5.74
mmol/l
1.63
82
800
5
46
1.09
0.10
3.6
4.6
140.60
178.91
%
—
5
46
6
55
1.10
0.09
3.2
2.2
1.43
4.96
ug/l
—
6
48
10
88
1.15
0.08
1.3
1.2
38.18
105.01
u/ml
—
5
32
13
143
0.90
0.08
3.5
2.2
—
—
—
0
0
8
78
1.03
0.07
3.9
2.3
—
—
—
0
0
14
129
1.10
0.06
2.3
2.7
0.63
0.80
ug/l
—
9
65
70
689
1.04
0.04
2.7
3.3
44.68
43.54
u/l
0.03
65
668
0
5
0.00
0.00
0.0
4.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
481.80
—
0
5
0
5
0.00
0.00
0.0
1.8
—
7.86
—
0
5
0
6
0.00
0.00
0.0
9.7
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
1332.20
—
0
5
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
28.82
—
0
5
0
6
0.00
0.00
0.0
2.0
—
1.24
—
0
6
0
5
0.00
0.00
0.0
6.4
—
—
—
0
0
0
5
0.00
0.00
0.0
9.2
—
33.40
—
0
5
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
0.02
—
0
6
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.7
—
—
—
0
0
8
87
0.91
-0.00
4.4
2.3
—
—
—
0
0
5
54
0.92
-0.00
22.8
5.5
94.40
92.22
%
—
5
54
0
7
0.00
-0.00
0.0
2.1
—
—
—
0
0
0
7
0.00
-0.00
0.0
2.9
—
141.86
—
0
7
0
9
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.1
—
27.13
—
0
8
0
9
0.00
-0.00
0.0
1.2
—
—
—
0
0
5
53
0.94
-0.00
3.2
1.7
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.1
—
—
—
0
0
5
58
0.86
-0.00
1.0
1.4
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.7
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: Q17_CONGEN_MALFO_LUNG_WIDE – Congenital malformations of lung, including avohilmo
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).