Hypertrophy of bone

M13_BONEHYPERTRPH

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 M89.3
  • Cause of death: ICD-10 M89.3

2 out of 7 registries used, show all original rules.

131

4. Check minimum number of events

None

131

5. Include endpoints

None

131

6. Filter based on genotype QC (FinnGen only)

119

Control definitions (FinnGen only)

Control exclude
M13_OSTEOCHONDRO

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
M89
Name in latin
Hypertrophia ossis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 932 474 453
Only index persons 900 464 436
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.01
Only index persons 0.02 0.02 0.02
Median age at first event (years)
Whole population 41.88 43.81 40.03
Only index persons 41.76 43.39 40.02

-FinnGen-

Key figures

All Female Male
Number of individuals 119 74 45
Unadjusted period prevalence (%) 0.02 0.03 0.02
Median age at first event (years) 43.29 40.79 47.41

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
122
Matched controls
1220
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
M89.3
ICD-10 Finland
Hypertrophy of bone
+∞
176.1
122
*
NHK10
NOMESCO Finland
Incision or excision of metatarsal or tarsal bone
111.5
18.1
19
*
NHK99
NOMESCO Finland
Other operation on bone of ankle or foot
26.4
16.2
22
10
SPAT1156
SPAT
Guidance concerning treatment of rash and skin
4.5
7.8
21
54

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
27
122
2.56
4.04
1.2
1.2
—
—
—
0
0
29
144
2.33
3.53
2.1
1.5
—
—
—
0
0
70
498
1.95
3.22
2.8
2.5
—
—
estimate
—
0
0
39
237
1.95
2.79
1.6
1.3
42.87
29.51
iu/ml
0.25
16
72
22
113
2.16
2.45
2.9
1.6
—
—
—
0
0
80
628
1.80
2.40
12.6
10.6
4.13
3.94
e9/l
0.25
71
556
9
28
3.39
2.36
2.0
1.1
—
—
—
0
0
35
218
1.85
2.28
1.7
1.3
8.49
6.50
u/ml
0.10
15
81
11
42
2.78
2.21
1.7
2.1
—
—
—
0
0
24
133
2.00
2.19
1.6
1.5
984.67
1177.06
nmol/l
0.83
18
99
57
416
1.69
2.14
14.4
9.5
1.17
1.17
inr
0.00
47
338
42
287
1.71
1.98
6.2
4.2
7.40
7.39
ph
0.58
32
200
47
334
1.66
1.90
2.9
2.2
—
—
—
0
0
6
17
3.65
1.86
5.8
1.4
—
—
—
0
0
8
29
2.88
1.82
1.5
2.0
—
—
—
0
0
37
252
1.67
1.74
1.9
2.0
2.46
2.80
mg/l
0.41
30
222
10
41
2.56
1.69
1.7
1.8
36.60
40.29
nmol/l
—
10
41
56
426
1.58
1.68
2.1
1.9
93.49
95.66
pmol/l
0.13
25
225
39
272
1.64
1.67
1.7
1.6
18.10
20.73
nmol/l
0.71
34
233
36
246
1.66
1.67
6.3
3.1
1.02
1.02
kg/l
0.87
22
157
10
42
2.50
1.66
1.2
1.3
—
—
—
0
0
70
562
1.58
1.66
5.0
3.4
0.00
0.00
estimate
-0.00
15
108
36
247
1.65
1.64
4.2
3.8
—
—
—
0
0
18
102
1.90
1.55
1.9
2.5
11.84
14.50
nmol/l
0.74
18
96
71
578
1.55
1.54
10.9
6.4
0.04
0.04
e9/l
0.29
63
506
5
15
3.43
1.54
1.4
1.3
—
—
—
0
0
41
298
1.57
1.46
5.5
3.4
0.00
0.00
estimate
-0.00
14
101
59
465
1.52
1.46
9.7
6.8
1.21
1.21
mmol/l
0.03
54
407
5
16
3.21
1.45
1.2
1.3
—
—
—
0
0
71
583
1.52
1.45
11.0
6.5
2.07
1.87
e9/l
1.29
66
523
9
40
2.35
1.43
8.8
5.0
2.69
1.61
%
—
9
34
43
318
1.54
1.42
6.5
6.1
—
—
—
0
0
70
575
1.51
1.41
11.1
6.4
0.55
0.55
e9/l
0.03
63
503
68
558
1.49
1.36
4.9
3.4
0.00
0.00
estimate
-0.00
15
110
69
569
1.49
1.34
5.1
3.4
0.00
0.00
estimate
-0.00
15
101
22
140
1.70
1.32
1.2
1.2
—
—
—
0
0
38
278
1.53
1.30
4.1
2.4
—
—
—
0
0
5
18
2.85
1.30
3.0
3.6
3.74
3.95
mmol/l
—
5
18
8
35
2.37
1.29
9.5
5.5
0.95
0.91
%
—
8
29
28
192
1.59
1.26
4.5
2.8
33.74
157.46
ng/l
1.17
19
118
114
1067
2.04
1.25
18.7
12.6
24.44
21.81
mg/l
0.42
100
853
8
39
2.12
1.17
1.1
1.3
—
—
—
0
0
71
599
1.44
1.16
10.8
6.7
0.18
0.19
e9/l
0.26
66
531
54
435
1.43
1.13
2.4
2.0
—
—
—
0
0
11
59
1.95
1.11
1.2
1.2
—
—
—
0
0
5
21
2.44
1.10
2.4
1.5
—
—
—
0
0
63
528
1.40
1.03
11.1
6.3
8.51
8.50
%
0.01
58
505
63
528
1.40
1.03
11.1
6.2
2.68
2.87
%
0.32
58
501
14
84
1.75
1.03
2.1
2.6
0.22
0.22
g/l
0.10
14
78
24
167
1.54
1.02
1.7
1.4
330.00
603.90
titre
—
8
41
0
31
0.00
0.98
0.0
1.1
—
0.73
—
0
17
31
231
1.46
0.96
1.3
1.7
0.52
1.12
mg/l
1.23
20
183
12
71
1.77
0.92
2.7
4.5
62.83
79.00
ng/l
0.66
12
66
62
529
1.35
0.86
11.3
6.2
0.73
0.71
%
0.14
57
499
35
274
1.39
0.83
5.5
5.3
—
—
—
0
0
6
32
1.92
0.83
1.0
1.3
—
—
—
0
0
8
47
1.75
0.82
3.9
3.7
—
—
—
0
0
47
387
1.35
0.82
5.4
3.5
12.54
38.77
e6/l
1.32
35
250
58
494
1.33
0.80
12.8
10.4
0.00
0.00
e9/l
-0.00
48
401
0
24
0.00
0.80
0.0
1.0
—
3.55
—
0
13
0
25
0.00
0.80
0.0
1.1
—
11.22
—
0
11
10
59
1.76
0.78
1.2
1.3
—
—
—
0
0
40
325
1.34
0.75
4.2
3.0
12.78
35.36
e6/l
1.78
33
238
5
25
2.04
0.73
1.0
1.2
—
—
—
0
0
5
25
2.04
0.73
1.0
1.2
—
—
—
0
0
50
422
1.31
0.72
4.9
3.2
0.00
0.00
estimate
-0.00
12
90
10
61
1.70
0.71
1.0
1.1
—
—
—
0
0
39
320
1.32
0.68
3.3
3.7
1.54
10.76
mg/mmol
2.90
21
208
8
49
1.68
0.63
2.5
1.5
—
—
—
0
0
23
176
1.38
0.62
1.7
1.8
—
—
—
0
0
48
410
1.28
0.62
7.0
4.2
36.06
36.59
g/l
0.34
48
391
5
30
1.69
0.62
1.2
1.1
—
—
—
0
0
5
30
1.69
0.62
1.2
1.2
—
—
—
0
0
7
111
0.61
0.61
2.6
1.4
—
—
—
0
0
0
20
0.00
0.61
0.0
2.6
—
58.58
—
0
20
38
317
1.29
0.58
3.1
3.2
16.89
53.49
mg/l
2.37
20
211
6
36
1.70
0.57
1.0
1.2
—
—
—
0
0
88
818
1.27
0.53
9.2
7.5
72.72
75.78
u/l
0.45
82
764
14
101
1.44
0.52
12.9
8.6
7.43
7.42
ph
—
8
52
115
1114
1.56
0.51
16.4
11.1
—
—
—
0
0
35
296
1.26
0.48
2.0
2.1
—
—
—
0
0
14
104
1.39
0.45
12.8
8.4
4.82
5.02
kpa
0.39
14
99
41
356
1.23
0.44
11.2
6.0
—
—
—
0
0
5
31
1.64
0.43
6.8
6.1
—
—
—
0
0
5
31
1.64
0.43
3.0
1.2
9.92
9.44
mg/l
—
5
31
0
15
0.00
0.41
0.0
1.5
—
—
—
0
0
0
15
0.00
0.41
0.0
9.7
—
943.33
—
0
15
105
1007
1.31
0.41
6.1
5.4
2.07
1.84
mu/l
0.87
97
945
0
17
0.00
0.41
0.0
12.5
—
1700.47
—
0
17
0
17
0.00
0.41
0.0
4.0
—
55.35
—
0
17
8
112
0.69
0.39
1.0
1.2
—
—
—
0
0
15
116
1.33
0.39
13.5
8.1
103.20
104.50
mmol/l
0.32
15
116
20
164
1.26
0.35
4.0
2.8
1.18
2.97
e6/l
0.96
11
77
43
478
0.84
0.35
2.0
1.9
1.58
1.42
mmol/l
0.37
37
408
11
143
0.75
0.34
1.5
1.4
—
—
—
0
0
6
45
1.35
0.34
1.7
1.5
3.93
10.84
u/l
—
6
36
89
845
1.20
0.34
4.9
4.5
14.56
14.65
pmol/l
0.13
80
793
16
128
1.29
0.34
2.0
1.8
—
—
—
0
0
39
347
1.18
0.32
1.5
1.4
—
—
—
0
0
7
53
1.34
0.31
13.9
11.4
0.74
0.65
%
—
7
53
44
483
0.86
0.29
2.8
2.8
—
—
—
0
0
10
76
1.34
0.29
4.2
1.8
0.82
1.61
g/l
—
10
70
33
293
1.17
0.28
3.9
2.8
0.13
0.48
e6/l
1.54
26
205
95
984
0.84
0.27
6.5
5.8
39.53
38.76
mmol/mol
0.33
90
943
21
180
1.20
0.26
3.4
2.9
0.62
0.71
ug/l
0.40
13
105
9
75
1.22
0.25
5.0
3.1
—
—
—
0
0
9
76
1.20
0.25
1.6
1.1
—
—
—
0
0
6
82
0.72
0.25
4.5
3.4
—
—
—
0
0
97
937
1.17
0.24
24.9
16.1
13.59
13.46
%
0.50
97
932
39
356
1.14
0.23
2.6
3.2
24.93
41.03
ng/l
0.50
22
218
5
41
1.23
0.22
1.0
1.1
—
—
—
0
0
49
456
1.12
0.21
4.4
3.1
6.15
6.23
ph
0.20
27
247
0
11
0.00
0.21
0.0
2.9
—
4.03
—
0
11
0
11
0.00
0.21
0.0
2.9
—
1.21
—
0
11
0
11
0.00
0.21
0.0
2.9
—
104.73
—
0
11
0
10
0.00
0.21
0.0
1.2
—
33.66
—
0
10
0
12
0.00
0.21
0.0
1.2
—
—
—
0
0
0
13
0.00
0.21
0.0
4.0
—
2.50
—
0
13
0
13
0.00
0.21
0.0
1.8
—
11.52
—
0
13
18
156
1.18
0.20
1.8
2.3
2.43
2.32
g/l
0.31
18
138
6
51
1.19
0.19
14.5
3.2
—
—
—
0
0
7
58
1.22
0.18
12.6
10.7
1.19
1.61
%
—
7
58
5
68
0.72
0.17
2.0
1.5
—
—
—
0
0
8
71
1.14
0.16
1.6
1.5
—
—
—
0
0
8
71
1.14
0.16
1.6
1.5
—
—
—
0
0
8
71
1.14
0.16
1.6
1.5
—
—
—
0
0
20
178
1.15
0.16
1.9
1.5
—
—
—
0
0
103
1007
1.15
0.16
4.2
4.0
1.41
1.30
mmol/l
0.34
98
948
7
85
0.81
0.15
1.3
1.5
5.40
20.26
iu/l
—
7
72
33
309
1.09
0.12
1.3
1.4
15.78
1.53
u/ml
—
6
80
33
311
1.08
0.10
4.0
2.8
0.00
0.00
estimate
-0.00
13
86
29
272
1.09
0.10
2.3
1.5
2.09
2.34
g/l
0.49
18
165
13
116
1.14
0.10
1.8
1.5
—
—
—
0
0
5
47
1.07
0.09
1.0
1.1
—
0.54
—
0
7
6
58
1.04
0.08
10.7
9.6
23.35
24.38
mmol/l
—
6
58
5
61
0.81
0.08
2.4
1.6
—
—
—
0
0
5
64
0.77
0.08
2.2
2.8
7.41
7.41
ph
—
5
55
14
127
1.12
0.08
1.5
1.5
—
—
—
0
0
11
98
1.13
0.08
7.9
2.0
11.00
10.11
g/l
0.28
11
89
8
73
1.10
0.08
1.6
1.5
—
—
—
0
0
9
88
1.02
0.07
11.7
8.9
—
—
—
0
0
101
1023
0.93
0.07
5.7
4.6
5.77
5.88
mmol/l
0.45
93
962
34
327
1.06
0.05
3.1
3.2
—
—
—
0
0
33
320
1.04
0.03
3.7
2.7
—
0.40
—
0
5
18
172
1.05
0.02
2.2
2.3
13.69
14.60
umol/l
0.27
18
156
10
97
1.03
0.00
1.1
1.3
—
—
—
0
0
13
133
0.97
0.00
1.5
1.4
—
—
—
0
0
25
247
1.02
0.00
1.9
1.7
—
—
—
0
0
15
155
0.96
0.00
1.6
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
2.01
—
0
7
5
49
1.02
-0.00
1.0
1.1
1.06
0.89
g/l
—
5
49
0
8
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
-0.00
0.0
2.6
—
1.68
—
0
5
0
6
0.00
-0.00
0.0
12.5
—
7.23
—
0
6
0
8
0.00
-0.00
0.0
1.8
—
90.15
—
0
8
0
5
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
-0.00
0.0
2.0
—
0.61
—
0
5
0
5
0.00
-0.00
0.0
1.0
—
1129.80
—
0
5
0
5
0.00
-0.00
0.0
1.6
—
—
—
0
0
5
49
1.02
-0.00
1.0
1.1
1.42
1.51
g/l
—
5
49
0
7
0.00
-0.00
0.0
3.0
—
0.47
—
0
7
0
8
0.00
-0.00
0.0
1.0
—
—
—
0
0
6
66
0.90
-0.00
1.7
1.6
330.83
328.15
mu/l
—
6
60
0
9
0.00
-0.00
0.0
1.0
—
7.23
—
0
9
5
58
0.86
-0.00
1.4
1.4
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint M13_BONEHYPERTRPH and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have M13_BONEHYPERTRPH.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: M13_BONEHYPERTRPH – Hypertrophy of bone

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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