Pseudopolyposis of colon

COLONPSEUDOP

ulcerative colitis: An inflammatory bowel disease involving the mucosal surface of the large intestine and rectum. It may present with an acute or slow onset and follows an intermittent or continuous course. Signs and symptoms include abdominal pain, diarrhea, fever, weight loss, and intestinal hemorrhage.

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Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 K51.4
  • Cause of death: ICD-10 K51.4

2 out of 7 registries used, show all original rules.

123

4. Check minimum number of events

None

123

5. Include endpoints

None

123

6. Filter based on genotype QC (FinnGen only)

111

Control definitions (FinnGen only)

Control exclude
K11_ENERCOLNONINF

Extra metadata

First used in FinnGen datafreeze
DF2
Parent code in ICD-10
K51
Name in latin
Pseudopolyposis coli

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 578 213 362
Only index persons 556 208 348
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.01
Only index persons 0.01 0.01 0.01
Median age at first event (years)
Whole population 49.37 48.91 49.79
Only index persons 49.04 48.02 49.65

-FinnGen-

Key figures

All Female Male
Number of individuals 111 51 60
Unadjusted period prevalence (%) 0.02 0.02 0.03
Median age at first event (years) 48.46 42.29 53.70

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
111
Matched controls
1110
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
K51.4
ICD-10 Finland
Inflammatory polyps
+∞
160.1
111
*
208
Kela drug reimbursment
Ulcerative colitis and Crohn's disease
+∞
130.3
98
*
A07EC02
ATC
mesalazine; oral, rectal
1566.6
118.1
95
*
K51.5
ICD-10 Finland
Left sided colitis
+∞
105.8
84
*
K51.9
ICD-10 Finland
Ulcerative colitis, unspecified
+∞
91.8
75
*
UJF32
NOMESCO Finland
Coloscopy
34.3
73.3
91
130
UJF30
NOMESCO Finland
Ileoscopy through colon
30.4
72.1
59
40
L04AX01
ATC
azathioprine; systemic
246.4
68.0
64
6
K51.3
ICD-10 Finland
Ulcerative (chronic) rectosigmoiditis
+∞
58.6
51
*
A07EA02
ATC
hydrocortisone; rectal
910.2
56.9
51
*
A07EA06
ATC
budesonide; oral, local oral
172.7
43.4
43
*
K51.8
ICD-10 Finland
Other ulcerative colitis
+∞
42.4
38
*
UJF45
NOMESCO Finland
Flexible sigmoidoscopy with biopsy
14.7
38.5
42
44
A07EC01
ATC
sulfasalazine; oral, rectal
13.5
32.5
36
38
K51.1
ICD-10 Finland
Ulcerative (chronic) ileocolitis
+∞
31.8
29
*
H02AB07
ATC
prednisone; oral
10.5
31.8
46
70
K51
ICD-10 Finland
Ulcerative colitis
+∞
29.5
27
*
K51.0
ICD-10 Finland
Ulcerative (chronic) pancolitis
+∞
27.2
25
*
K50.9
ICD-10 Finland
Crohn disease, unspecified
+∞
24.9
23
*
K51.2
ICD-10 Finland
Ulcerative (chronic) proctitis
+∞
22.7
21
*
326
Kela drug reimbursment
Adalimumab, golimumab, infliximab and ustekinumab (intestinal diseases)
+∞
22.7
21
*
H02AB06
ATC
prednisolone; systemic
7.9
21.7
87
349
K50.1
ICD-10 Finland
Crohn disease of large intestine
+∞
17.1
16
*
L01BB02
ATC
mercaptopurine; oral
+∞
17.1
16
*
UJF14
NOMESCO Finland
Enteroscopy of ileoanal anastomosis
+∞
17.1
16
*
A12AX
ATC
Calcium, combinations with vitamin D and/or other drugs
5.2
17.0
59
198
D94
ICPC
Chronic enteritis/ulcerative colitis
185.0
15.9
16
*
O99.6
ICD-10 Finland
Diseases of the digestive system complicating pregnancy, childbirth and the puerperium
+∞
14.9
14
*
UJF12
NOMESCO Finland
Enteroscopy through intestinal stoma
+∞
13.8
13
*
A07EA01
ATC
prednisolone; oral, rectal
+∞
13.8
13
*
K50.0
ICD-10 Finland
Crohn disease of small intestine
+∞
12.7
12
*
56310
ICD-8 Finland
Chronic enteritis and ulcerative colitis, Ulcerative colitis
+∞
12.7
12
*
K50.8
ICD-10 Finland
Other Crohn disease
+∞
12.7
12
*
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
4.3
12.7
49
172
K52.9
ICD-10 Finland
Noninfective gastroenteritis and colitis, unspecified
26.4
12.0
16
7
JN1AE
NOMESCO Finland
Ultrasound examination of upper part of abdomen
5.7
11.3
24
51
WX002
NOMESCO Finland
Sedation and analgesia
4.5
11.3
35
103
JFA15
NOMESCO Finland
Endoscopic polypectomy in colon
11.9
11.1
20
20
GD1AA
NOMESCO Finland
Thorax X-ray examination
3.9
11.0
71
348
M07.5*K51.9
ICD-10 Finland
Arthropathy in ulcerative colitis
+∞
9.5
9
*
K56.6
ICD-10 Finland
Other and unspecified intestinal obstruction
20.8
9.2
13
7
P01AB01
ATC
metronidazole; oral, rectal
3.4
9.1
63
312
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
4.3
8.9
27
77
J01MA02
ATC
ciprofloxacin; systemic
3.3
8.9
60
291
TPH04
NOMESCO Finland
Cathetrisation of vein
3.6
8.7
38
140
L04AB02
ATC
infliximab; parenteral
97.1
8.5
9
*
A07EC03
ATC
olsalazine; oral
+∞
8.4
8
*
A06AC01
ATC
ispaghula (psylla seeds); oral
3.4
7.8
38
149
JFH30
NOMESCO Finland
Total colectomy, mucosal proctectomy and ileoanal anastomosis without ileostomy
+∞
7.4
7
*
JFH33
NOMESCO Finland
Total colectomy, mucosal proctectomy, ileoanal anastomosis and ileostomy
+∞
7.4
7
*
JF1CG
NOMESCO Finland
Extensive MRI of small bowel
+∞
7.4
7
*
UJF92
NOMESCO Finland
Capsular endoscopy
42.7
6.8
8
*
K83.0
ICD-10 Finland
Cholangitis
42.7
6.8
8
*
JN3AD
NOMESCO Finland
Abdominal CT examination
3.8
6.5
22
67
WX302
NOMESCO Finland
Thoracal epidural anesthesy
9.0
6.5
13
16
JFG00
NOMESCO Finland
Closure of loop enterostomy without resection
73.9
6.5
7
*
Z93.2
ICD-10 Finland
Ileostomy status
+∞
6.3
6
*
N17.9
ICD-10 Finland
Acute renal failure, unspecified
16.1
6.0
9
6

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
70
93
18.67
56.93
3.2
1.2
—
—
—
0
0
79
304
6.55
20.15
13.8
5.5
—
—
—
0
0
61
203
5.45
17.97
2.8
2.1
2.76
3.09
mg/l
0.51
51
179
85
435
5.07
13.18
16.1
5.9
2.73
2.76
%
0.04
80
412
85
435
5.07
13.18
16.5
5.9
9.16
8.51
%
1.36
80
413
85
435
5.07
13.18
16.4
5.9
0.80
0.69
%
1.13
80
408
88
472
5.17
12.57
16.9
6.2
0.58
0.56
e9/l
0.26
83
409
88
475
5.11
12.39
17.1
6.2
0.04
0.04
e9/l
0.09
83
409
89
489
5.14
12.12
17.5
6.7
0.18
0.18
e9/l
0.04
84
428
11
0
+∞
11.66
3.6
0.0
12.12
—
mg/l
—
6
0
39
142
3.69
9.18
1.5
1.7
—
—
—
0
0
89
547
4.16
9.01
18.3
10.1
4.24
4.08
e9/l
0.26
84
477
71
389
3.29
8.42
12.1
10.6
1.07
1.18
inr
1.87
64
313
70
388
3.18
8.00
7.3
6.3
1.20
1.21
mmol/l
0.75
64
361
43
180
3.27
7.99
1.6
1.8
—
—
—
0
0
74
433
3.13
7.51
7.5
7.5
1.21
1.21
mmol/l
0.32
59
374
34
132
3.27
7.05
2.5
2.5
20.06
25.03
%
1.34
34
126
31
115
3.35
6.90
4.6
3.7
3.64
6.65
e9/l
0.82
26
100
23
72
3.77
6.59
5.3
2.2
12.69
10.24
g/l
2.00
23
65
36
155
2.96
6.17
2.7
2.4
12.29
14.45
umol/l
0.94
36
147
33
144
2.84
5.46
2.0
1.4
707.69
404.80
titre
0.79
13
25
10
11
9.85
5.41
4.1
2.8
3.15
3.82
e9/l
—
10
11
22
76
3.36
5.40
6.3
5.9
0.18
0.78
%
0.67
11
18
22
77
3.32
5.29
2.0
5.4
7.40
7.34
ph
1.09
15
56
9
9
10.75
5.13
1.1
1.1
—
—
—
0
0
13
27
5.31
4.67
2.2
1.1
—
—
—
0
0
42
226
2.38
4.42
6.8
4.6
—
—
—
0
0
15
46
3.61
4.37
12.5
4.6
—
—
—
0
0
7
6
12.33
4.33
1.0
1.3
—
—
—
0
0
47
270
2.28
4.23
9.6
6.1
—
—
—
0
0
21
82
2.93
4.18
7.2
5.6
0.35
0.86
%
—
10
21
23
95
2.79
4.14
1.5
1.7
—
—
—
0
0
10
18
5.99
4.08
4.2
2.3
52.30
60.47
%
—
10
18
55
352
2.11
3.66
3.0
1.9
—
—
—
0
0
19
76
2.81
3.61
8.0
6.5
0.43
0.13
%
—
7
15
59
390
2.09
3.58
1.9
2.0
100.18
97.88
pmol/l
0.13
37
205
38
212
2.20
3.57
2.1
1.4
2.63
2.35
g/l
0.74
30
138
19
78
2.73
3.44
7.8
5.8
0.00
0.12
%
—
7
17
44
266
2.08
3.34
2.8
3.5
7.40
7.40
ph
0.24
30
186
6
7
8.97
3.30
1.7
1.3
—
—
—
0
0
13
44
3.21
3.26
5.2
2.4
90.80
166.35
ng/l
0.49
13
39
9
22
4.35
2.95
1.2
1.2
—
—
—
0
0
11
33
3.58
2.90
1.2
1.3
—
—
—
0
0
5
6
8.65
2.77
1.0
1.0
1523.80
1954.17
miu/ml
—
5
6
26
140
2.12
2.60
2.7
1.8
—
—
—
0
0
5
7
7.41
2.57
1.2
1.0
—
—
—
0
0
10
32
3.33
2.51
13.0
3.2
0.99
0.87
%
—
10
26
6
12
5.22
2.43
1.7
1.2
—
—
—
0
0
6
12
5.22
2.43
1.7
1.2
—
—
—
0
0
6
12
5.22
2.43
1.7
1.2
—
—
—
0
0
6
12
5.22
2.43
1.7
1.2
—
—
—
0
0
40
257
1.87
2.43
1.9
1.6
18.45
20.30
nmol/l
0.37
35
214
33
200
1.93
2.38
1.5
1.8
0.77
0.83
mg/l
0.11
25
165
10
34
3.13
2.35
2.8
1.2
—
—
—
0
0
7
18
4.08
2.29
1.1
1.3
—
—
—
0
0
8
24
3.51
2.23
8.7
4.8
3.90
3.88
mmol/l
—
8
24
24
133
2.03
2.22
10.7
7.7
103.50
103.87
mmol/l
0.13
24
133
8
25
3.37
2.14
2.9
1.1
—
—
—
0
0
18
91
2.17
2.09
1.9
3.0
1.83
1.90
%
0.12
18
84
22
121
2.02
2.07
1.7
1.7
—
—
—
0
0
10
38
2.79
2.06
13.0
3.2
2.12
1.40
%
—
10
31
7
21
3.48
2.00
1.0
1.4
—
—
—
0
0
36
237
1.77
1.97
2.3
2.0
—
—
—
0
0
29
179
1.84
1.95
6.6
2.9
600.29
191.41
ng/l
0.42
17
122
19
101
2.06
1.95
10.9
9.5
4.82
5.23
kpa
0.78
19
95
32
207
1.77
1.85
5.4
3.6
1.02
1.02
kg/l
0.09
22
129
58
442
1.65
1.83
3.5
2.6
—
—
estimate
—
0
0
7
23
3.18
1.83
1.9
1.2
—
—
—
0
0
22
127
1.91
1.81
4.8
6.0
0.99
0.99
mmol/l
0.00
22
115
76
623
1.70
1.79
5.3
4.0
—
—
—
0
0
44
314
1.66
1.78
3.0
2.2
—
—
—
0
0
23
136
1.87
1.76
1.4
1.3
—
—
—
0
0
16
84
2.06
1.70
4.8
3.5
7.38
7.39
ph
—
10
51
6
19
3.28
1.68
1.8
1.3
9931.83
1088.09
e6/l
—
6
11
5
14
3.69
1.63
1.0
1.1
—
—
—
0
0
5
14
3.69
1.63
2.8
1.7
—
—
—
0
0
8
32
2.61
1.63
1.3
1.2
—
—
—
0
0
8
32
2.61
1.63
1.3
1.4
—
—
—
0
0
15
79
2.04
1.58
7.6
5.2
2.74
62.31
ug/l
—
10
62
35
242
1.65
1.57
1.6
1.4
0.63
1.09
u/ml
—
8
76
84
722
1.67
1.50
4.4
4.4
14.75
14.74
pmol/l
0.00
77
672
17
97
1.89
1.45
11.9
9.8
2.73
1.07
mmol/l
1.55
11
81
10
48
2.19
1.32
1.5
1.2
—
—
—
0
0
32
226
1.58
1.30
14.9
5.7
—
—
—
0
0
9
44
2.14
1.30
4.6
3.4
22.52
24.35
mmol/l
—
9
44
96
866
1.80
1.30
5.4
5.2
1.56
1.90
mu/l
2.67
89
807
12
64
1.98
1.23
2.6
1.9
5.93
6.12
ph
—
7
46
18
111
1.74
1.21
1.6
1.4
—
—
—
0
0
5
20
2.57
1.16
2.0
1.9
7.39
7.42
ph
—
5
20
32
238
1.48
1.02
4.2
2.5
—
—
—
0
0
35
445
0.69
1.01
2.4
3.0
—
—
—
0
0
0
30
0.00
0.99
0.0
1.3
—
1.43
—
0
21
0
30
0.00
0.99
0.0
1.3
—
—
—
0
0
0
32
0.00
0.96
0.0
1.4
—
—
—
0
0
7
127
0.52
0.95
1.4
1.4
—
—
—
0
0
43
343
1.41
0.95
4.3
3.4
104.99
32.73
ng/l
0.57
31
237
15
220
0.63
0.86
2.9
2.8
0.63
0.72
ug/l
—
10
118
10
58
1.80
0.82
1.2
3.4
4.85
4.52
pmol/l
—
10
50
5
96
0.50
0.82
1.0
1.8
—
—
—
0
0
10
60
1.73
0.75
1.4
1.3
—
—
—
0
0
9
56
1.66
0.74
1.1
1.1
—
—
—
0
0
46
388
1.32
0.68
5.4
3.2
0.08
0.00
estimate
0.47
12
100
7
43
1.67
0.68
3.9
3.8
—
—
—
0
0
5
29
1.76
0.64
1.4
1.0
—
—
—
0
0
8
50
1.65
0.63
6.8
2.1
0.57
0.65
%
—
8
50
36
297
1.31
0.62
4.0
2.8
0.00
0.00
estimate
—
10
92
0
22
0.00
0.60
0.0
1.3
—
—
—
0
0
12
81
1.54
0.60
4.1
9.8
1.92
1.36
mmol/l
0.42
12
81
57
506
1.26
0.54
5.1
3.5
0.00
0.00
estimate
-0.00
13
100
7
46
1.56
0.49
17.3
3.3
37.10
36.95
°c
—
7
46
33
277
1.27
0.49
6.2
3.4
0.08
0.00
estimate
0.47
13
105
8
56
1.46
0.44
1.8
1.2
29.69
22.58
iu/l
—
8
49
5
31
1.64
0.43
1.0
1.2
3.92
3.82
mmol/l
—
5
31
8
57
1.43
0.43
4.3
3.7
7.42
7.42
ph
—
8
51
11
79
1.44
0.42
4.8
3.0
—
—
—
0
0
8
60
1.36
0.41
1.0
1.4
194.00
322.15
mu/l
—
8
54
10
71
1.45
0.41
1.9
1.2
285.60
380.56
u/ml
—
10
65
0
19
0.00
0.39
0.0
1.2
—
—
—
0
0
5
36
1.41
0.38
1.0
1.3
355.20
437.31
mg/l
—
5
36
11
81
1.40
0.38
3.9
10.9
—
—
—
0
0
9
71
1.29
0.37
1.4
1.4
—
—
—
0
0
12
91
1.36
0.35
1.2
1.2
—
—
—
0
0
6
44
1.38
0.35
1.2
1.2
6.17
7.21
u/l
—
6
33
85
810
1.21
0.32
38.5
16.6
13.92
13.48
%
2.29
85
805
18
148
1.26
0.32
1.4
1.7
—
—
—
0
0
102
993
1.34
0.29
31.9
12.2
—
—
—
0
0
54
500
1.16
0.28
5.2
3.4
0.00
0.00
estimate
-0.00
13
111
5
70
0.70
0.27
1.2
1.2
—
27.50
—
0
6
9
75
1.22
0.25
5.3
2.0
16.50
5.54
ug/l
—
9
66
15
125
1.23
0.24
3.9
2.5
11.84
15.10
nmol/l
0.86
15
119
54
506
1.13
0.22
5.2
3.4
0.00
0.00
estimate
-0.00
13
111
0
11
0.00
0.21
0.0
2.8
—
1.17
—
0
11
0
11
0.00
0.21
0.0
2.8
—
4.00
—
0
11
0
11
0.00
0.21
0.0
2.8
—
106.18
—
0
11
0
11
0.00
0.21
0.0
3.6
—
17.68
—
0
11
0
12
0.00
0.21
0.0
20.9
—
1223.92
—
0
12
0
12
0.00
0.21
0.0
15.3
—
807.67
—
0
12
20
177
1.16
0.18
1.2
1.4
1.43
7.20
u/ml
—
10
74
7
62
1.14
0.17
9.9
13.0
0.59
0.65
%
—
7
62
14
120
1.19
0.17
1.4
1.3
—
—
—
0
0
30
275
1.12
0.17
1.4
1.5
—
—
—
0
0
19
170
1.14
0.14
3.3
2.3
454.08
573.39
mosm/kgh2o
1.95
19
146
91
889
1.13
0.14
4.6
4.6
5.72
5.88
mmol/l
0.78
82
829
25
270
0.90
0.12
4.7
3.8
14.73
62.00
mg/l
2.79
20
184
5
43
1.17
0.10
1.8
2.3
—
—
—
0
0
42
402
1.07
0.09
4.4
3.2
6.00
6.12
ph
0.34
28
227
5
61
0.81
0.08
1.2
1.1
—
—
—
0
0
5
60
0.83
0.08
2.8
10.3
23.76
25.48
mmol/l
—
5
60
5
60
0.83
0.08
2.0
1.6
—
—
—
0
0
5
62
0.80
0.08
1.0
1.2
—
—
—
0
0
7
64
1.10
0.08
10.0
12.7
0.94
1.29
%
—
7
64
8
73
1.10
0.08
4.3
2.5
0.14
0.13
e6/l
—
8
68
10
108
0.92
0.03
2.0
1.5
—
—
—
0
0
27
278
0.96
0.02
5.7
4.3
6.74
9.66
mg/mmol
0.21
21
189
96
962
0.98
0.00
5.9
5.4
2.71
2.77
mmol/l
0.22
90
907
20
202
0.99
0.00
3.6
2.1
5.08
4.27
e6/l
0.18
20
183
42
419
1.00
0.00
2.7
2.0
1.57
1.43
mmol/l
0.38
37
355
95
953
0.98
0.00
5.3
4.7
1.39
1.41
mmol/l
0.25
90
895
91
907
1.02
0.00
4.4
4.0
1.32
1.30
mmol/l
0.10
84
845
19
194
0.98
0.00
1.4
1.4
14.10
31.60
iu/ml
—
6
53
12
124
0.96
0.00
2.0
1.8
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
0.00
—
0
5
0
6
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.7
—
50.00
—
0
7
0
8
0.00
-0.00
0.0
1.1
—
120.86
—
0
8
0
8
0.00
-0.00
0.0
1.5
—
19.38
—
0
8
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
3.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
3.0
—
162.80
—
0
5
0
5
0.00
-0.00
0.0
1.0
—
161.80
—
0
5

Mortality – FinRegistry

Association

Association between endpoint COLONPSEUDOP and mortality.

Females

No data

Males

Parameter HR [95% CI] p-value
COLONPSEUDOP 1.439 [1.04, 2.0] 0.029
Birth year 0.987 [0.98, 1.0] 0.006

During the follow-up period (1.1.1998 — 31.12.2019), 56 out of 325 males with COLONPSEUDOP died.

Mortality risk

Mortality risk for people of age

years, who have COLONPSEUDOP.

N-year risk Females Males
1 No data 0.245%
5 No data 1.514%
10 No data 3.885%
15 No data 7.248%
20 No data 12.735%

Relationships between endpoints

Index endpoint: COLONPSEUDOP – Pseudopolyposis of colon

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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