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This is a non-core endpoint: only basic statistics are computed.

Malignant neoplasm of other and ill-defined sites

C3_OTHER_OR_ILLDEFINED_SITES

benign neoplasm: A neoplasm which is characterized by the absence of morphologic features associated with malignancy (severe cytologic atypia, tumor cell necrosis, and high mitotic rate). Benign neoplasms remain confined to the original site of growth and do not metastasize to other anatomic sites.

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Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Cause of death: ICD-10 C76
  • Cause of death: ICD-9 195
  • Cause of death: ICD-8 195
  • Cancer registry: Topography ICD-O-3 C76
  • Cancer registry: Morphology ICD-O-3 ANY
  • Cancer registry: Behaviour codes 3

2 out of 7 registries used, show all original rules.

139

4. Check minimum number of events

None

139

5. Include endpoints

None

139

6. Filter based on genotype QC (FinnGen only)

127

Control definitions (FinnGen only)

Control exclude
C3_CANCER, C3_CANCER_WIDE

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF9

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 127 42 85
Unadjusted period prevalence (%) 0.03 0.01 0.04
Median age at first event (years) 74.53 78.40 72.61

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
128
Matched controls
1280
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
C76.2
ICD-10 Finland
Malignant neoplasm of other and ill-defined sites: Abdomen
+∞
60.3
53
*
130
Kela drug reimbursment
Malignant tumour
+∞
38.5
35
*
Z51.5
ICD-10 Finland
Palliative care
12.6
28.9
32
33
8000/3-C76.2
ICD-O-3
Neoplasm, malignant of abdomen, NOS
+∞
22.6
21
*
A03FA01
ATC
metoclopramide; systemic, rectal
6.8
20.6
40
80
H02AB02
ATC
dexamethasone; systemic
58.7
17.6
20
*
C78.7
ICD-10 Finland
Secondary malignant neoplasm of liver and intrahepatic bile duct
+∞
16.0
15
*
8000/3-C80.9
ICD-O-3
Neoplasm, malignant of unknown primary site
+∞
13.8
13
*
8140/3-C76.2
ICD-O-3
Adenocarcinoma, NOS, of abdomen, NOS
+∞
11.6
11
*
C76.3
ICD-10 Finland
Malignant neoplasm of other and ill-defined sites: Pelvis
+∞
10.6
10
*
C76.0
ICD-10 Finland
Malignant neoplasm of other and ill-defined sites: Head, face and neck
+∞
10.6
10
*
C76.1
ICD-10 Finland
Malignant neoplasm of other and ill-defined sites: Thorax
+∞
10.6
10
*
C61
ICD-10 Finland
Malignant neoplasm of prostate
+∞
10.6
10
*
C78.6
ICD-10 Finland
Secondary malignant neoplasm of retroperitoneum and peritoneum
+∞
10.6
10
*
8140/3-C61.9
ICD-O-3
Adenocarcinoma, NOS, of prostate gland
+∞
9.5
9
*
C79.8
ICD-10 Finland
Secondary malignant neoplasm of other specified sites
+∞
9.5
9
*
L01BC06
ATC
capecitabine; oral
+∞
8.4
8
*
C80
ICD-10 Finland
Malignant neoplasm, without specification of site
+∞
8.4
8
*
N02AB03
ATC
fentanyl; nasal, sublingual, transdermal
10.4
8.0
15
16
C44.31
ICD-10 Finland
Basocellular carcinoma of the skin on another or unspecified part of the face
+∞
7.4
7
*
A04AA02
ATC
granisetron; systemic, transdermal
+∞
7.4
7
*
WD125
NOMESCO Finland
Demanding cystostatic therapy of methastized malignancy
+∞
7.4
7
*
8140/3-C80.9
ICD-O-3
Adenocarcinoma, NOS, of unknown primary site
+∞
7.4
7
*
JN4AD
NOMESCO Finland
Body CT examination
7.2
6.9
16
25
JN4BD
NOMESCO Finland
Extensive body CT
6.6
6.9
17
29
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
2.7
6.6
48
230
N02AA05
ATC
oxycodone; systemic
3.0
6.5
35
143
WF049
NOMESCO Finland
Radiotherapy of metastasis
73.4
6.5
7
*
R18
ICD-10 Finland
Ascites
19.2
6.4
9
5
QAE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in head or neck
8.4
6.3
13
17
8090/3-C44.9
ICD-O-3
Basal cell carcinoma, NOS, of skin, NOS
+∞
6.3
6
*
C80.90
ICD-10 Finland
Malignant tumor without specified localization without histology
+∞
6.3
6
*
C26.9
ICD-10 Finland
Malignant neoplasm: Ill-defined sites within the digestive system
+∞
6.3
6
*
8000/3-C76.1
ICD-O-3
Neoplasm, malignant of thorax, NOS
+∞
6.3
6
*
8070/3-C80.9
ICD-O-3
Squamous cell carcinoma, NOS, of unknown primary site
+∞
6.3
6
*
A04AA01
ATC
ondansetron; systemic, rectal
10.8
6.2
11
11

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
16
11
16.40
10.31
1.6
1.1
—
—
—
0
0
9
0
+∞
9.49
1.6
0.0
26.98
—
ug/l
—
9
0
18
40
5.07
7.93
1.6
1.1
—
—
—
0
0
29
123
2.76
4.94
2.0
1.9
—
—
—
0
0
37
187
2.38
4.36
2.5
1.5
—
—
—
0
0
14
51
2.96
3.10
9.4
7.8
23.55
24.16
mmol/l
0.17
14
51
46
295
1.87
2.77
4.7
4.3
—
—
—
0
0
19
88
2.36
2.67
1.3
1.3
—
—
—
0
0
40
248
1.89
2.66
3.6
2.1
—
—
—
0
0
42
603
0.55
2.57
41.1
23.4
328.14
331.15
g/l
1.63
42
595
13
53
2.62
2.36
1.1
1.3
—
—
—
0
0
9
28
3.38
2.36
1.1
1.1
—
—
—
0
0
7
18
4.05
2.28
1.0
1.0
—
—
—
0
0
40
264
1.75
2.12
2.6
3.3
7.39
7.40
ph
0.50
26
184
6
15
4.14
2.06
1.0
1.3
0.28
0.20
g/l
—
6
15
6
15
4.14
2.06
1.0
1.5
1.36
0.98
g/l
—
6
15
58
429
1.64
2.00
9.2
3.6
15.87
12.94
umol/l
0.52
58
402
6
16
3.88
1.96
1.2
1.8
249.00
79.97
u/ml
—
6
16
55
702
0.62
1.88
6.7
7.5
41.04
41.72
mmol/mol
0.22
49
638
12
53
2.39
1.87
1.1
1.7
—
—
—
0
0
7
23
3.16
1.82
1.1
1.2
—
—
—
0
0
6
21
2.94
1.52
2.2
3.9
—
—
—
0
0
38
269
1.59
1.50
4.7
4.0
—
—
—
0
0
46
592
0.65
1.49
34.5
22.3
14.68
13.94
%
3.42
46
575
57
700
0.67
1.45
4.3
5.4
4.25
4.25
mmol/l
0.01
50
622
64
767
0.67
1.43
21.6
16.6
—
—
—
0
0
60
726
0.67
1.39
5.1
5.6
6.10
6.23
mmol/l
0.31
51
627
54
420
1.49
1.39
9.8
5.0
4.45
4.73
e9/l
0.35
43
354
60
725
0.68
1.37
4.7
6.2
2.45
2.40
mmol/l
0.19
50
636
9
42
2.23
1.37
1.0
1.1
—
—
—
0
0
16
92
1.84
1.32
2.3
1.8
—
—
—
0
0
11
55
2.09
1.31
13.5
8.2
95.22
94.03
%
1.27
11
55
56
445
1.46
1.27
8.5
5.5
1.22
1.20
mmol/l
0.90
50
365
14
79
1.87
1.22
1.5
1.2
640.00
688.00
titre
—
5
20
58
696
0.70
1.21
4.4
5.3
1.39
1.42
mmol/l
0.25
50
609
11
57
2.02
1.21
13.5
7.9
0.67
0.67
%
0.00
11
57
28
195
1.56
1.18
2.2
2.5
359.52
381.21
umol/l
0.47
21
159
45
349
1.45
1.14
2.6
2.8
219.48
129.02
ug/l
1.60
39
309
55
661
0.71
1.12
4.1
4.6
1.16
1.25
mmol/l
0.65
46
569
11
59
1.95
1.11
13.5
7.8
1.10
1.29
%
0.52
11
59
43
333
1.44
1.09
3.5
2.4
—
—
estimate
—
0
0
14
217
0.60
0.98
3.0
4.2
—
—
—
0
0
46
368
1.39
0.96
4.9
4.3
24.44
24.24
%
0.04
40
342
45
361
1.38
0.92
5.1
4.3
9.67
9.16
%
0.47
39
331
55
456
1.36
0.92
19.6
19.0
1.33
1.40
inr
0.41
44
394
6
29
2.12
0.90
1.2
1.2
—
—
—
0
0
33
252
1.42
0.89
3.6
3.0
0.53
0.60
e6/l
0.13
23
194
12
72
1.74
0.88
13.0
7.4
—
—
—
0
0
8
45
1.83
0.86
1.1
1.4
—
—
—
0
0
8
46
1.79
0.84
1.3
1.5
—
—
—
0
0
35
273
1.39
0.84
2.0
2.4
3.01
2.89
mg/l
0.13
28
223
45
367
1.35
0.82
5.0
4.2
0.54
0.59
%
0.27
39
333
10
59
1.75
0.78
1.8
3.5
23.48
23.11
mmol/l
—
10
59
40
323
1.35
0.77
3.3
3.6
—
—
—
0
0
9
54
1.72
0.76
2.3
2.6
—
—
—
0
0
44
362
1.33
0.75
5.1
4.2
2.44
2.80
%
0.65
38
332
44
362
1.33
0.75
5.1
4.2
59.58
60.45
%
0.17
39
337
18
127
1.49
0.73
4.2
4.2
1.14
1.05
mmol/l
0.41
18
110
37
299
1.33
0.71
3.6
3.1
36.64
295.76
e6/l
0.67
28
240
61
691
0.78
0.69
5.5
5.2
1.99
2.09
mu/l
0.23
55
591
27
209
1.37
0.68
2.4
2.6
575.77
538.23
mosm/kgh2o
0.42
22
180
8
50
1.64
0.62
7.4
4.7
—
—
—
0
0
29
234
1.31
0.56
2.3
1.9
610.21
452.10
pmol/l
0.65
24
191
28
341
0.77
0.54
5.7
4.4
0.00
0.00
estimate
—
10
68
10
66
1.56
0.54
5.5
3.9
—
—
—
0
0
37
434
0.79
0.53
5.1
4.2
0.00
0.00
estimate
-0.00
11
92
38
442
0.80
0.50
2.3
2.3
106.07
89.23
pmol/l
0.78
24
229
21
263
0.76
0.50
5.0
4.4
0.00
0.00
estimate
—
9
87
17
129
1.37
0.49
11.4
5.3
103.88
104.41
mmol/l
0.15
17
129
38
439
0.81
0.47
4.8
4.3
0.00
0.00
estimate
-0.00
11
92
16
122
1.36
0.45
10.9
5.5
4.95
5.04
kpa
0.15
16
117
16
122
1.36
0.45
10.9
5.5
12.60
11.03
kpa
0.91
16
117
38
437
0.81
0.45
5.0
4.2
0.00
0.00
estimate
-0.00
11
97
8
55
1.48
0.44
2.6
2.4
1.35
1.02
%
—
8
55
5
32
1.58
0.42
4.4
5.2
7.38
7.41
ph
—
5
32
0
15
0.00
0.41
0.0
1.3
—
8.27
—
0
15
37
321
1.21
0.40
4.4
3.8
32.59
127.94
e6/l
1.32
28
246
46
408
1.20
0.40
5.4
4.4
0.16
0.20
e9/l
1.42
38
344
15
116
1.33
0.39
2.1
3.3
7.38
7.38
ph
—
6
78
45
400
1.19
0.38
5.3
4.0
0.64
0.62
e9/l
0.24
33
330
6
42
1.45
0.36
1.2
1.0
—
—
—
0
0
45
402
1.18
0.35
5.3
4.1
0.04
0.04
e9/l
0.16
34
333
11
82
1.37
0.35
6.3
3.6
7.40
7.41
ph
0.08
11
66
6
47
1.29
0.32
6.7
4.5
37.08
36.95
°c
—
6
47
7
55
1.29
0.30
2.7
2.4
0.57
0.63
%
—
7
55
45
408
1.16
0.29
5.4
4.2
1.59
1.71
e9/l
0.45
35
348
15
122
1.26
0.28
11.6
5.5
7.42
7.41
ph
—
6
77
32
359
0.86
0.28
3.9
3.9
6.13
6.27
ph
0.26
15
195
26
226
1.19
0.27
2.2
1.8
1312.44
1156.26
nmol/l
0.26
20
166
8
65
1.25
0.27
5.5
4.4
—
—
—
0
0
21
242
0.84
0.25
5.3
3.8
0.20
0.00
estimate
—
10
71
0
11
0.00
0.21
0.0
3.9
—
18.62
—
0
11
0
11
0.00
0.21
0.0
1.4
—
—
—
0
0
0
10
0.00
0.21
0.0
1.5
—
—
—
0
0
0
10
0.00
0.21
0.0
1.5
—
—
—
0
0
0
10
0.00
0.21
0.0
1.5
—
—
—
0
0
0
10
0.00
0.21
0.0
1.5
—
—
—
0
0
0
10
0.00
0.21
0.0
1.5
—
—
—
0
0
53
565
0.89
0.21
4.2
3.9
15.04
15.16
pmol/l
0.13
48
487
0
13
0.00
0.21
0.0
1.7
—
10.31
—
0
13
0
14
0.00
0.20
0.0
1.0
—
—
—
0
0
27
299
0.88
0.19
3.8
3.1
120.34
47.27
mg/l
0.50
20
206
8
71
1.14
0.16
2.0
1.3
—
—
—
0
0
9
79
1.15
0.15
1.7
1.4
64.99
67.06
g/l
—
9
70
6
55
1.10
0.09
2.7
2.7
—
0.17
—
0
12
6
57
1.06
0.08
3.3
2.9
24.55
24.80
mmol/l
—
6
52
6
58
1.04
0.08
2.7
2.7
—
0.18
—
0
11
8
74
1.09
0.07
4.0
3.2
75.63
92.28
ng/l
—
8
61
30
315
0.94
0.07
4.3
3.7
16.30
6.25
mg/mmol
0.50
21
208
13
120
1.09
0.05
1.4
1.2
4.04
2.60
g/l
—
8
69
30
290
1.05
0.03
4.9
2.1
2.32
2.35
mmol/l
0.41
30
245
30
309
0.96
0.02
4.7
4.2
—
—
—
0
0
21
206
1.02
0.00
5.0
2.5
2.48
2.45
mmol/l
0.54
21
175
33
332
0.99
0.00
12.9
10.8
0.00
0.00
e9/l
-0.00
22
255
15
148
1.02
0.00
4.4
3.5
—
—
—
0
0
21
212
0.99
0.00
10.4
4.6
—
—
—
0
0
17
175
0.97
0.00
1.4
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
3.0
—
467.40
—
0
5
0
5
0.00
0.00
0.0
1.4
—
0.77
—
0
5
0
5
0.00
0.00
0.0
1.4
—
1293.20
—
0
5
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
35.60
—
0
5
0
5
0.00
0.00
0.0
2.4
—
49.14
—
0
5
0
5
0.00
0.00
0.0
1.0
—
160.60
—
0
5
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
0.00
0.0
2.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
138.20
—
0
5
0
5
0.00
0.00
0.0
1.0
—
3.00
—
0
5
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
8
82
0.97
-0.00
1.1
1.5
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.9
—
1.14
—
0
7
0
9
0.00
-0.00
0.0
2.3
—
1.66
—
0
9
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
2.1
—
—
—
0
0
8
84
0.95
-0.00
2.0
2.4
0.31
0.39
e6/l
—
8
79
6
60
1.00
-0.00
2.7
2.7
—
0.00
—
0
10
6
60
1.00
-0.00
2.7
2.7
—
0.54
—
0
13
0
6
0.00
-0.00
0.0
5.5
—
23.78
—
0
6
6
59
1.02
-0.00
2.3
1.5
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.5
—
318.00
—
0
8

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: C3_OTHER_OR_ILLDEFINED_SITES – Malignant neoplasm of other and ill-defined sites

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).