Other cestode infections, including avohilmo

AB1_OTHER_CESTODE_WIDE

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Primary healthcare outpatient: ICD-10 B71
  • Hospital discharge: ICD-10 B71
  • Hospital discharge: ICD-9 123[8-9]
  • Hospital discharge: ICD-8 123[4|6|9]
  • Cause of death: ICD-10 B71
  • Cause of death: ICD-9 123[8-9]
  • Cause of death: ICD-8 123[4|6|9]

3 out of 7 registries used, show all original rules.

163

4. Check minimum number of events

None

163

5. Include endpoints

None

163

6. Filter based on genotype QC (FinnGen only)

139

Control definitions (FinnGen only)

Control exclude
AB1_HELMINTIASES

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF5

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded (different definition than used in FinnGen).

-FinnGen-

Key figures

All Female Male
Number of individuals 139 79 60
Unadjusted period prevalence (%) 0.03 0.03 0.03
Median age at first event (years) 35.52 32.09 40.04

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
141
Matched controls
1410
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
12340
ICD-8 Finland
Other cestode infection, Diphyllobothriasis, intestinal
+∞
155.4
119
*
B71.9
ICD-10 Finland
Cestode infection, unspecified
+∞
14.8
14
*
XFP96
NOMESCO Finland
Other intraoperative electrophysiological investigation in arhythmia or disturbance of impulse propagation
11.9
10.1
18
17
FP1B5
NOMESCO Finland
Resting ECG, 12 leads
19.1
6.3
9
5

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
20
34
6.67
8.05
10.6
17.4
—
—
—
0
0
54
267
2.66
6.94
6.7
4.8
1.02
1.02
kg/l
0.43
29
185
81
1003
0.55
2.99
5.8
5.4
4.69
4.55
mmol/l
0.61
81
904
28
467
0.50
2.75
6.9
13.1
0.00
0.00
e9/l
0.99
21
379
19
353
0.47
2.51
2.5
3.7
—
—
—
0
0
5
155
0.30
2.47
1.0
1.2
—
—
—
0
0
13
54
2.55
2.27
1.8
1.4
—
—
—
0
0
19
97
2.11
2.12
7.3
3.2
—
—
—
0
0
39
263
1.67
1.86
6.9
4.2
—
0.40
—
0
5
27
408
0.58
1.75
3.0
3.1
2.30
2.35
mmol/l
1.26
27
366
6
19
3.25
1.68
1.2
1.4
—
—
—
0
0
0
37
0.00
1.36
0.0
4.2
—
—
—
0
0
0
40
0.00
1.35
0.0
3.0
—
1.42
—
0
40
18
280
0.59
1.27
1.1
1.4
—
—
—
0
0
40
519
0.68
1.24
4.7
4.2
36.75
35.04
g/l
1.27
40
477
0
34
0.00
1.17
0.0
2.9
—
7.80
—
0
34
0
35
0.00
1.17
0.0
1.4
—
—
—
0
0
7
140
0.47
1.16
4.7
4.4
2.74
63.16
ug/l
—
7
110
16
250
0.59
1.14
1.9
2.7
2.38
2.46
mmol/l
3.02
16
221
33
429
0.70
1.00
1.8
2.1
—
—
—
0
0
94
843
1.35
0.88
24.5
23.2
331.07
331.26
g/l
0.06
94
836
103
1112
0.73
0.87
26.3
27.0
247.03
245.19
e9/l
0.10
103
1088
103
1112
0.73
0.87
26.9
27.4
39.55
39.61
%
0.04
103
1094
103
1112
0.73
0.87
26.4
27.2
132.23
132.33
g/l
0.02
103
1095
103
1112
0.73
0.87
26.2
26.9
30.00
30.39
pg
1.59
103
1095
103
1111
0.73
0.85
26.2
26.9
90.42
91.54
fl
1.90
103
1094
18
123
1.53
0.82
1.7
1.7
—
—
—
0
0
0
24
0.00
0.80
0.0
2.4
—
107.50
—
0
24
0
24
0.00
0.80
0.0
2.4
—
1.21
—
0
24
0
24
0.00
0.80
0.0
2.4
—
4.04
—
0
24
0
25
0.00
0.80
0.0
4.6
—
45.44
—
0
25
0
27
0.00
0.78
0.0
2.1
—
59.46
—
0
27
14
92
1.58
0.75
6.6
5.9
25.79
24.69
mmol/l
0.35
14
85
6
101
0.58
0.65
1.0
1.5
—
—
—
0
0
10
63
1.63
0.63
8.0
4.8
36.93
36.95
°c
—
10
63
10
63
1.63
0.63
1.8
1.5
—
—
—
0
0
5
30
1.69
0.62
1.0
5.0
1.40
1.43
mmol/l
—
5
24
0
20
0.00
0.61
0.0
1.6
—
0.53
—
0
15
35
421
0.78
0.60
3.2
4.0
10.53
129.70
e6/l
2.33
27
306
101
1075
0.79
0.58
20.7
21.3
139.54
139.54
mmol/l
0.01
101
1046
101
1075
0.79
0.58
20.4
21.3
4.03
4.00
mmol/l
0.65
101
1045
29
355
0.77
0.57
6.5
5.4
—
—
—
0
0
10
65
1.58
0.57
5.0
2.4
0.46
0.65
%
—
10
65
9
133
0.65
0.55
1.9
3.2
3.15
6.20
e9/l
—
9
116
9
135
0.64
0.55
1.2
1.3
—
—
—
0
0
6
98
0.60
0.54
1.0
2.2
0.24
0.21
g/l
—
6
91
10
66
1.55
0.54
6.4
2.5
1.66
1.38
%
—
10
66
12
83
1.49
0.54
2.2
2.3
82.83
229.96
ng/l
2.16
12
73
9
64
1.43
0.52
11.7
7.3
16.33
15.52
%
—
9
58
17
129
1.36
0.48
8.5
6.8
120.53
118.15
g/l
0.21
17
124
8
116
0.67
0.48
3.4
1.9
512.63
382.79
nmol/l
—
8
107
27
324
0.79
0.45
2.8
3.1
0.09
0.37
e6/l
2.60
21
242
27
222
1.27
0.45
2.4
3.2
1304.42
233.37
ng/l
0.41
19
177
6
95
0.62
0.43
6.8
3.1
—
—
—
0
0
8
56
1.45
0.43
1.3
1.5
—
49.67
—
0
6
100
1053
0.83
0.42
16.9
15.9
—
—
—
0
0
0
15
0.00
0.41
0.0
2.1
—
89.02
—
0
15
0
15
0.00
0.41
0.0
1.7
—
—
—
0
0
0
15
0.00
0.41
0.0
1.1
—
—
—
0
0
0
16
0.00
0.41
0.0
1.1
—
335.89
—
0
9
0
16
0.00
0.41
0.0
1.1
—
—
—
0
0
0
16
0.00
0.41
0.0
2.3
—
5.57
—
0
16
0
17
0.00
0.41
0.0
1.5
—
31.88
—
0
17
0
18
0.00
0.40
0.0
1.6
—
0.16
—
0
10
0
18
0.00
0.40
0.0
2.2
—
1.10
—
0
10
44
493
0.84
0.37
4.0
2.6
—
—
estimate
—
0
0
13
166
0.76
0.35
8.0
4.1
1.04
1.03
mmol/l
0.01
13
147
6
44
1.38
0.35
6.2
4.6
40.73
22.64
mg/l
—
6
38
6
44
1.38
0.35
6.3
4.6
24.77
200.77
mg/l
—
6
38
31
354
0.84
0.32
3.3
4.2
—
—
—
0
0
7
99
0.69
0.32
11.7
4.9
10.19
10.58
mmol/l
—
7
91
7
52
1.36
0.31
2.1
2.6
—
—
—
0
0
18
148
1.25
0.31
8.2
6.4
7.42
7.42
ph
—
9
94
15
184
0.79
0.31
2.0
2.1
24.04
22.84
%
0.15
15
169
7
56
1.26
0.30
5.0
3.4
4.71
4.51
pmol/l
—
7
48
12
95
1.29
0.27
3.7
2.7
6.60
6.14
ph
—
5
67
33
368
0.87
0.26
4.9
4.3
7.39
7.40
ph
0.10
23
278
45
411
1.14
0.26
4.1
3.3
—
—
—
0
0
12
96
1.27
0.25
1.3
1.6
—
—
—
0
0
32
357
0.87
0.25
4.4
2.3
—
—
—
0
0
32
357
0.87
0.25
1.9
1.7
18.62
21.40
nmol/l
0.57
32
293
9
76
1.20
0.25
1.2
1.1
—
—
—
0
0
34
377
0.87
0.25
3.7
3.8
2.60
7.98
mg/mmol
2.21
17
230
100
1036
0.88
0.24
16.7
17.9
23.54
25.34
mg/l
0.25
84
877
42
385
1.13
0.22
4.3
2.3
52.07
80.37
u/l
1.04
42
352
5
41
1.23
0.22
7.2
4.1
0.98
3.86
ratio
—
5
24
35
384
0.88
0.22
3.1
3.3
52.09
24.82
e6/l
0.32
29
297
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
0
10
0.00
0.21
0.0
1.5
—
7.88
—
0
10
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
0
13
0.00
0.21
0.0
1.0
—
—
—
0
0
0
13
0.00
0.21
0.0
1.9
—
4.08
—
0
13
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
50
534
0.90
0.20
8.3
6.3
1.20
1.21
mmol/l
0.72
50
483
51
479
1.10
0.18
6.1
3.8
6.52
6.27
ph
0.88
24
277
7
61
1.16
0.18
1.1
1.3
—
—
—
0
0
16
183
0.86
0.17
1.6
1.3
18.72
40.29
iu/ml
—
5
68
5
65
0.76
0.17
1.0
1.2
—
—
—
0
0
8
69
1.17
0.17
1.1
1.8
—
—
—
0
0
8
69
1.17
0.17
1.9
2.9
—
17.58
—
0
6
19
168
1.15
0.16
9.9
5.9
105.00
104.10
mmol/l
0.47
19
168
11
130
0.83
0.16
1.5
1.4
—
—
—
0
0
6
76
0.78
0.16
1.8
2.5
7.41
7.42
ph
—
6
63
37
344
1.10
0.15
5.1
7.0
—
—
—
0
0
17
150
1.15
0.15
8.5
6.3
12.58
11.50
kpa
0.21
17
141
17
150
1.15
0.15
8.5
6.3
5.12
5.02
kpa
0.14
17
141
16
181
0.87
0.15
1.8
1.9
—
—
—
0
0
15
170
0.87
0.14
1.3
1.4
1.24
16.33
u/ml
—
7
64
17
151
1.14
0.14
2.1
1.9
—
—
—
0
0
20
221
0.89
0.14
1.2
1.5
2.92
2.70
g/l
0.10
14
131
34
364
0.91
0.13
3.4
3.2
17.85
49.44
mg/l
2.12
17
240
9
109
0.81
0.13
7.1
3.3
64.40
66.33
g/l
—
9
100
12
105
1.16
0.11
2.5
1.6
—
—
—
0
0
12
105
1.16
0.11
4.2
3.1
73.51
68.98
e9/l
0.18
12
82
23
249
0.91
0.11
7.5
5.4
—
—
—
0
0
19
207
0.91
0.10
2.3
2.1
14.34
13.11
umol/l
0.35
19
189
56
581
0.94
0.10
16.1
15.0
1.39
1.30
inr
0.43
40
476
15
136
1.12
0.09
6.7
6.6
95.13
94.84
%
0.07
15
130
6
55
1.09
0.09
3.0
1.9
—
—
—
0
0
5
63
0.79
0.08
13.2
2.9
24.84
24.48
mmol/l
—
5
63
7
66
1.06
0.08
9.7
7.0
24.17
24.54
mmol/l
—
7
66
30
315
0.94
0.07
5.4
5.6
2.35
2.21
ug/l
0.08
30
276
13
121
1.08
0.04
5.7
2.6
0.88
1.74
mmol/l
0.41
13
100
53
521
1.03
0.02
2.0
2.1
86.89
93.76
pmol/l
0.56
32
242
12
127
0.94
0.01
1.3
1.4
—
—
—
0
0
10
96
1.04
0.00
12.8
7.2
—
—
—
0
0
13
133
0.98
0.00
1.9
1.6
—
—
—
0
0
19
193
0.98
0.00
2.2
2.1
2.49
2.25
g/l
0.91
19
174
27
267
1.01
0.00
2.7
3.6
85.04
86.78
%
0.12
27
262
49
494
0.99
0.00
3.9
4.6
23.88
35.29
ng/l
0.99
38
377
7
69
1.02
0.00
1.1
1.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.9
—
—
—
0
0
8
83
0.96
-0.00
4.5
3.7
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.7
—
103.50
—
0
6
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.6
—
13.73
—
0
9
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
0.00
—
0
5
0
6
0.00
-0.00
0.0
1.0
—
12.25
—
0
6
0
6
0.00
-0.00
0.0
2.3
—
1.17
—
0
6
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
9
0.00
-0.00
0.0
2.6
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
4.0
—
0.63
—
0
5
0
5
0.00
-0.00
0.0
1.8
—
—
—
0
0
8
87
0.91
-0.00
1.5
1.3
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
5.4
—
39.60
—
0
5
0
8
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded (different definition than used in FinnGen).

Relationships between endpoints

Index endpoint: AB1_OTHER_CESTODE_WIDE – Other cestode infections, including avohilmo

GWS hits: -

This endpoint is excluded (different definition than used in FinnGen).