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This is a non-core endpoint: only basic statistics are computed.

Foreign object accidentally left in body during surgical and medical care

VWXY20_FOREI_OBJECT_ACCIDENTALLY_LEFT_BODY_SURGI_MEDICAL_CARE

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Y61
  • Cause of death: ICD-10 Y61

2 out of 7 registries used, show all original rules.

141

4. Check minimum number of events

None

141

5. Include endpoints

None

141

6. Filter based on genotype QC (FinnGen only)

123

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
Y6

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 123 91 32
Unadjusted period prevalence (%) 0.03 0.03 0.01
Median age at first event (years) 52.44 47.09 67.64

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
126
Matched controls
1260
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
Y61
ICD-10 Finland
Foreign object accidentally left in body during surgical and medical care
+∞
69.3
60
*
Y61.9
ICD-10 Finland
Foreign object accidentally left in body during surgical and medical care during unspecified surgical and medical care
+∞
20.4
19
*
Y61.8
ICD-10 Finland
Foreign object accidentally left in body during surgical and medical care during other surgical and medical care
+∞
18.2
17
*
Y61.0
ICD-10 Finland
Foreign object accidentally left in body during surgical and medical care during surgical operation
+∞
18.2
17
*
T81.58
ICD-10 Finland
Foreign body accidentally left in body cavity or operation wound following a procedure
+∞
13.8
13
*
Y83
ICD-10 Finland
Surgical operation and other surgical procedures as the cause of abnormal reaction of the patient, or of later complication, without mention of misadventure at the time of the procedure
5.3
10.0
22
48
T81.4
ICD-10 Finland
Infection following a procedure, not elsewhere classified
4.1
8.7
27
78
JAL11
NOMESCO Finland
Laparoscopy and removal of foreign body
84.9
7.5
8
*
T18.1
ICD-10 Finland
Foreign body in oesophagus
28.2
6.3
8
*
T19.1
ICD-10 Finland
Foreign body in bladder
+∞
6.3
6
*
W44
ICD-10 Finland
Foreign body entering into or through eye or natural orifice
13.4
6.2
10
8

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
82
537
2.51
5.67
3.5
2.9
—
—
estimate
—
0
0
57
356
2.10
3.97
3.7
2.5
—
—
—
0
0
73
509
2.03
3.68
5.0
3.5
6.42
6.26
ph
0.57
45
287
31
162
2.21
3.33
1.9
3.3
3.91
3.45
e6/l
0.07
14
85
84
638
1.95
3.08
5.5
3.8
0.08
0.00
estimate
0.47
12
134
84
640
1.94
3.03
5.3
3.9
0.00
0.00
estimate
—
10
126
83
633
1.91
2.95
5.2
3.8
0.00
0.00
estimate
-0.00
11
130
120
1080
3.33
2.83
23.6
15.4
27.74
21.74
mg/l
0.92
105
862
43
274
1.86
2.63
5.3
4.1
—
—
—
0
0
83
647
1.83
2.60
6.1
5.1
6.44
6.39
mmol/l
0.09
73
597
19
91
2.28
2.48
5.4
4.4
0.43
0.66
%
—
7
29
42
274
1.80
2.35
6.2
4.0
1.02
1.02
kg/l
0.15
34
179
82
651
1.74
2.27
8.5
10.8
4.22
4.03
e9/l
0.33
71
571
74
572
1.71
2.25
6.5
6.5
0.58
0.55
e9/l
0.52
64
493
74
573
1.71
2.22
6.5
6.6
0.04
0.04
e9/l
0.19
64
492
76
597
1.69
2.13
6.5
6.9
0.20
0.18
e9/l
0.44
68
528
64
483
1.66
2.07
16.7
13.5
1.28
1.18
inr
0.68
51
393
39
258
1.74
2.05
1.7
1.7
2.27
1.18
mg/l
0.73
28
211
9
32
2.95
2.04
3.7
2.2
—
—
—
0
0
63
476
1.65
2.01
2.0
2.0
108.05
96.00
pmol/l
1.07
31
250
69
535
1.64
1.98
7.2
7.4
1.21
1.21
mmol/l
0.39
62
461
22
123
1.96
1.95
1.2
1.4
—
—
—
0
0
102
879
1.84
1.94
4.7
4.7
14.70
14.66
pmol/l
0.08
93
803
50
359
1.65
1.93
1.7
1.6
—
—
—
0
0
17
87
2.10
1.90
6.5
5.0
0.00
0.16
%
—
5
25
43
299
1.67
1.87
3.9
2.1
3.32
2.73
mg/l
0.70
37
263
74
590
1.62
1.85
6.6
6.6
1.92
1.85
e9/l
0.32
68
525
52
381
1.62
1.84
5.0
2.9
—
—
—
0
0
14
67
2.23
1.84
1.1
1.3
—
—
—
0
0
17
91
2.00
1.70
6.7
5.3
0.00
0.36
%
—
5
25
23
138
1.82
1.66
1.2
1.3
—
—
—
0
0
48
353
1.58
1.64
6.2
6.2
—
—
—
0
0
46
336
1.58
1.61
2.9
4.4
7.40
7.40
ph
0.06
26
242
7
26
2.79
1.60
1.4
1.2
—
—
—
0
0
53
401
1.56
1.60
3.9
4.3
30.61
23.71
ng/l
0.46
33
268
17
96
1.89
1.48
6.5
4.7
0.00
0.84
%
—
5
34
34
237
1.60
1.43
1.4
1.3
0.95
11.66
u/ml
2.29
12
90
7
29
2.49
1.41
9.6
5.2
1.31
1.11
mmol/l
—
7
24
115
1058
2.00
1.38
4.5
4.6
1.49
1.51
mmol/l
0.23
109
981
116
1074
2.01
1.30
5.3
5.3
2.63
2.67
mmol/l
0.22
110
999
24
158
1.64
1.26
3.5
2.0
—
—
—
0
0
15
86
1.84
1.25
5.9
3.9
—
—
—
0
0
60
485
1.45
1.24
5.7
3.7
0.00
0.03
estimate
—
8
110
34
247
1.52
1.19
1.4
1.3
37.71
30.04
iu/ml
—
9
83
55
442
1.43
1.16
4.5
3.9
186.42
113.84
e6/l
0.18
31
312
8
41
2.01
1.11
9.6
3.3
—
—
—
0
0
45
352
1.43
1.08
5.5
3.9
0.00
0.02
estimate
—
10
128
0
29
0.00
0.99
0.0
1.0
—
1.16
—
0
14
0
29
0.00
0.99
0.0
1.0
—
2.81
—
0
17
28
203
1.49
0.99
2.8
3.6
17.65
147.27
ng/l
1.49
20
131
112
1043
1.66
0.99
5.2
4.7
5.77
5.81
mmol/l
0.13
102
959
19
126
1.60
0.98
1.4
1.5
—
—
—
0
0
11
62
1.85
0.97
8.0
2.7
7.41
7.43
ph
0.54
11
50
110
1024
1.58
0.92
5.8
5.6
1.79
1.82
mu/l
0.15
105
944
41
324
1.39
0.92
3.1
3.1
0.05
0.40
e6/l
3.68
23
243
60
505
1.36
0.91
8.3
10.7
0.00
0.00
e9/l
0.71
46
408
25
180
1.49
0.91
1.7
1.4
432.00
567.27
titre
—
5
44
13
80
1.70
0.88
3.0
2.1
15462.41
5990.98
u/l
—
5
29
6
32
1.92
0.83
7.5
2.7
1.41
1.55
mg/l
—
6
26
53
444
1.33
0.81
1.6
1.9
1.29
1.37
mmol/l
0.27
48
380
0
24
0.00
0.80
0.0
1.1
—
—
—
0
0
46
380
1.33
0.77
3.6
3.2
63.62
215.47
e6/l
0.42
31
298
19
134
1.49
0.77
2.6
1.6
—
—
—
0
0
9
55
1.68
0.75
1.8
2.0
—
—
—
0
0
107
1001
1.46
0.75
4.1
4.0
1.18
1.20
mmol/l
0.08
101
921
42
344
1.33
0.74
5.5
6.7
—
—
—
0
0
9
56
1.65
0.74
2.6
2.2
—
—
—
0
0
11
167
0.63
0.72
1.3
1.6
—
—
—
0
0
20
145
1.45
0.71
7.0
7.1
105.15
104.42
mmol/l
0.43
20
145
10
61
1.69
0.71
1.9
1.9
—
—
—
0
0
16
111
1.51
0.70
4.5
4.0
7.38
7.39
ph
—
10
76
17
120
1.48
0.69
11.6
8.1
7.41
7.42
ph
—
9
78
7
44
1.62
0.66
1.4
1.5
—
—
—
0
0
7
114
0.59
0.61
1.4
1.4
—
—
—
0
0
0
20
0.00
0.61
0.0
1.2
—
1.06
—
0
8
0
22
0.00
0.60
0.0
1.1
—
0.59
—
0
10
9
59
1.57
0.56
1.1
1.1
—
—
—
0
0
11
74
1.53
0.55
1.4
1.1
—
—
—
0
0
6
99
0.59
0.54
5.0
3.4
—
—
—
0
0
10
66
1.56
0.54
1.6
4.0
—
—
—
0
0
9
63
1.46
0.53
2.8
3.0
0.80
0.66
%
—
9
63
9
64
1.44
0.53
2.8
3.0
1.14
1.29
%
—
9
64
53
466
1.24
0.52
2.1
1.9
—
—
—
0
0
37
314
1.25
0.49
1.4
1.3
0.70
2.58
u/ml
1.28
12
76
7
48
1.48
0.47
2.3
1.5
1.18
1.16
g/l
—
7
48
7
48
1.48
0.47
2.3
1.5
0.23
0.21
g/l
—
7
48
10
70
1.47
0.43
4.1
3.3
—
—
—
0
0
13
171
0.73
0.43
1.3
1.5
—
—
—
0
0
5
32
1.59
0.42
4.4
1.6
25.36
24.76
mmol/l
—
5
32
8
59
1.38
0.42
4.0
4.4
23.95
24.38
mmol/l
—
8
59
11
148
0.72
0.41
1.5
1.9
—
—
—
0
0
0
15
0.00
0.41
0.0
2.2
—
90.89
—
0
15
13
97
1.38
0.41
5.6
9.8
—
—
—
0
0
13
99
1.35
0.37
1.1
1.3
—
—
—
0
0
32
285
1.16
0.26
5.8
5.7
—
—
—
0
0
40
365
1.14
0.24
4.8
3.1
0.00
0.00
estimate
—
9
107
17
145
1.20
0.22
1.1
1.3
—
—
—
0
0
0
11
0.00
0.21
0.0
1.6
—
33.18
—
0
11
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
1.74
—
0
10
0
12
0.00
0.21
0.0
1.0
—
—
—
0
0
0
12
0.00
0.21
0.0
1.2
—
37.41
—
0
12
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
38
349
1.13
0.20
4.2
3.6
—
—
—
0
0
0
14
0.00
0.20
0.0
1.5
—
—
—
0
0
5
68
0.72
0.17
8.4
11.1
0.52
0.69
%
—
5
68
36
335
1.10
0.15
4.1
3.8
6.20
10.75
mg/mmol
0.74
23
198
10
117
0.84
0.13
2.8
2.1
346.90
377.17
nmol/l
—
10
108
5
44
1.14
0.10
2.8
1.2
0.86
0.88
g/l
—
5
44
22
204
1.10
0.09
1.8
1.9
—
—
—
0
0
5
48
1.04
0.09
1.2
1.4
—
—
—
0
0
6
56
1.07
0.09
1.2
1.1
—
—
—
0
0
6
57
1.06
0.08
6.2
2.4
1.45
1.51
g/l
—
6
50
7
64
1.10
0.08
1.6
1.7
—
—
—
0
0
11
98
1.13
0.08
4.5
8.1
1.53
1.37
mmol/l
0.13
11
98
34
324
1.07
0.08
3.2
3.2
35.84
56.37
mg/l
0.55
22
206
9
86
1.05
0.07
4.7
3.5
65.19
66.63
g/l
—
9
81
8
92
0.86
0.07
2.0
1.3
—
—
—
0
0
29
277
1.06
0.06
1.5
1.5
2.61
2.49
g/l
0.14
21
160
10
90
1.12
0.05
2.2
2.5
—
15.84
—
0
9
29
278
1.06
0.05
1.6
1.8
—
—
—
0
0
45
438
1.04
0.04
2.7
3.0
—
—
—
0
0
13
122
1.07
0.03
1.2
1.2
—
—
—
0
0
10
99
1.01
0.00
1.3
1.5
—
—
—
0
0
32
318
1.01
0.00
1.6
2.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
6.8
—
41.40
—
0
5
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.3
—
5.84
—
0
7
5
59
0.84
-0.00
2.0
1.8
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
18.85
—
0
6
0
5
0.00
-0.00
0.0
2.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
5
56
0.89
-0.00
1.6
1.6
—
—
—
0
0
6
68
0.88
-0.00
8.3
8.5
23.58
24.64
mmol/l
—
6
68
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
6
65
0.92
-0.00
7.2
11.7
95.78
93.05
%
—
6
65
0
7
0.00
-0.00
0.0
1.1
—
0.00
—
0
7
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
8
81
0.99
-0.00
3.8
1.9
1.49
1.56
g/l
—
8
75
9
91
0.99
-0.00
1.8
1.3
37.90
274.56
u/ml
—
9
84
0
5
0.00
-0.00
0.0
3.2
—
6.64
—
0
5
0
5
0.00
-0.00
0.0
1.2
—
26.00
—
0
5
0
8
0.00
-0.00
0.0
2.1
—
63.13
—
0
8
6
68
0.88
-0.00
7.2
10.8
1.38
1.30
%
—
6
68
5
49
1.02
-0.00
2.0
4.6
36.86
36.98
°c
—
5
49
0
8
0.00
-0.00
0.0
2.5
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: VWXY20_FOREI_OBJECT_ACCIDENTALLY_LEFT_BODY_SURGI_MEDICAL_CARE – Foreign object accidentally left in body during surgical and medical care

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).