Other infiltrative disorders of skin and subcutaneous tissue

L12_OTHERINFILTRATIVESKIN

skin disease: Any deviation from the normal structure or function of the skin or subcutaneous tissue that is manifested by a characteristic set of symptoms and signs.

Suggest a new description

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L98.6
  • Cause of death: ICD-10 L98.6

2 out of 7 registries used, show all original rules.

192

4. Check minimum number of events

None

192

5. Include endpoints

None

192

6. Filter based on genotype QC (FinnGen only)

171

Control definitions (FinnGen only)

Control exclude
L12_OTHERSKINSUBCUTIS

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
L98
Name in latin
Aliae morbositates infiltrativae cutis et textus subcutanei

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1124 634 485
Only index persons 1034 597 437
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.01
Only index persons 0.02 0.02 0.02
Median age at first event (years)
Whole population 55.18 56.99 52.63
Only index persons 55.43 57.00 53.29

-FinnGen-

Key figures

All Female Male
Number of individuals 171 105 66
Unadjusted period prevalence (%) 0.03 0.04 0.03
Median age at first event (years) 57.08 56.51 57.98

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
176
Matched controls
1760
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
L98.6
ICD-10 Finland
Other infiltrative disorders of skin and subcutaneous tissue
+∞
88.1
77
*
TQX10
NOMESCO Finland
Biopsy of skin and subcutaneous tissue
20.3
80.8
75
62
L98.69
ICD-10 Finland
Other infiltrative disease of the skin and subcutaneous tissue
+∞
54.0
49
*
L98.60
ICD-10 Finland
Pseudolymphoma of the skin
+∞
30.1
28
*
L98.64
ICD-10 Finland
Benign lymphocyte infiltration into the skin [Jessner-Kanof]
+∞
21.3
20
*
L98.63
ICD-10 Finland
Lymphocytoma of the skin
+∞
18.0
17
*
L30.9
ICD-10 Finland
Dermatitis, unspecified
4.0
16.2
63
216
D07AC01
ATC
betamethasone; topical
3.3
13.7
93
447
L93.0
ICD-10 Finland
Discoid lupus erythematosus
151.2
13.6
14
*
D07AD01
ATC
clobetasol; topical
3.8
13.5
52
175
R21
ICD-10 Finland
Rash and other nonspecific skin eruption
5.9
13.4
26
50
QAA05
NOMESCO Finland
Incision for biopsy of skin of head or neck
19.2
12.8
19
11
QAE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in head or neck
4.9
12.0
29
68
117
Kela drug reimbursment
Leukaemia and other malignant diseases of the blood and bone marrow, and malignant diseases of the lymphatic tissue
5.6
9.6
19
37
D07AC13
ATC
mometasone; topical
2.8
9.4
68
324
P01BA02
ATC
hydroxychloroquine; oral
4.0
9.1
28
79
L98.9
ICD-10 Finland
Disorder of skin and subcutaneous tissue, unspecified
21.3
8.6
12
6
D48.5
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Skin
4.2
8.4
24
64
D07AB08
ATC
desonide; topical
3.4
8.0
32
108
L82
ICD-10 Finland
Seborrhoeic keratosis
2.9
7.9
43
175
L93.2
ICD-10 Finland
Other local lupus erythematosus
+∞
7.3
7
*
QBA99
NOMESCO Finland
Other local destruction of skin of trunk
31.4
7.2
9
*
E0000UV, ,
ATC
2.3
7.0
86
513
C83.80
ICD-10 Finland
B-cell lymphoma in marginal zone
72.4
6.5
7
*
S18
ICPC
Laceration/cut
2.2
6.1
94
604

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
35
60
7.03
20.53
1.4
1.2
—
—
—
0
0
54
209
3.28
11.06
1.7
1.3
437.50
507.69
titre
0.19
16
52
69
349
2.61
8.34
6.3
4.5
—
—
—
0
0
117
779
2.50
7.56
8.6
5.8
0.56
0.58
e9/l
0.44
102
667
116
783
2.41
7.06
8.7
5.8
0.05
0.04
e9/l
1.44
101
668
118
808
2.40
6.87
8.8
6.1
0.23
0.19
e9/l
1.17
105
708
116
798
2.33
6.54
8.8
5.7
1.91
2.00
e9/l
0.26
103
704
94
602
2.21
6.20
2.6
2.1
—
—
—
0
0
107
724
2.22
6.12
8.7
5.8
55.76
57.24
%
0.67
107
699
122
880
2.26
5.82
12.5
10.8
3.69
4.00
e9/l
1.06
107
767
20
63
3.45
5.51
2.1
1.8
2.26
8.01
iu/ml
—
5
12
41
205
2.30
4.78
1.3
1.2
—
—
—
0
0
30
140
2.38
4.06
1.5
1.4
—
—
—
0
0
27
123
2.41
3.85
4.1
4.0
0.25
0.70
%
—
8
41
26
120
2.37
3.60
1.2
1.4
—
—
—
0
0
28
135
2.28
3.51
4.3
3.3
58.26
73.08
e9/l
1.45
20
99
103
776
1.79
3.48
9.8
6.9
1.21
1.21
mmol/l
0.13
93
676
41
232
2.00
3.43
2.7
2.0
29.56
29.14
s
0.22
41
227
26
123
2.31
3.41
4.4
4.2
0.13
0.09
%
—
8
35
50
306
1.89
3.33
5.2
3.8
255.71
228.06
ng/l
0.06
38
235
27
134
2.20
3.17
4.4
4.1
0.89
0.85
%
—
9
46
95
712
1.73
3.15
3.5
2.9
139.29
111.60
ug/l
0.62
87
664
33
178
2.05
3.14
1.3
1.6
—
—
—
0
0
26
128
2.21
3.11
4.3
4.5
1.43
0.05
%
—
7
38
41
243
1.90
2.98
1.6
1.7
—
—
—
0
0
8
17
4.88
2.95
1.6
1.4
—
—
—
0
0
10
28
3.72
2.83
1.6
1.8
—
—
—
0
0
73
521
1.69
2.82
9.4
5.5
—
—
—
0
0
13
50
2.73
2.59
1.2
1.2
—
—
—
0
0
37
223
1.83
2.54
10.5
6.5
103.49
104.22
mmol/l
0.41
37
223
44
280
1.76
2.53
1.7
2.0
—
—
—
0
0
8
21
3.94
2.49
1.3
1.1
—
—
—
0
0
68
491
1.63
2.44
4.3
3.9
7.39
7.40
ph
0.50
51
340
59
415
1.63
2.34
7.2
4.2
—
—
—
0
0
58
407
1.63
2.32
3.3
3.0
340.26
347.07
umol/l
0.17
53
348
8
23
3.59
2.30
5.9
2.4
—
—
—
0
0
6
13
4.74
2.29
2.2
1.1
—
—
—
0
0
6
13
4.74
2.29
1.7
1.4
—
—
—
0
0
90
706
1.56
2.23
14.4
10.7
0.00
0.00
e9/l
0.58
72
563
7
19
3.79
2.17
1.9
1.6
—
—
—
0
0
7
19
3.79
2.17
2.3
2.1
—
—
—
0
0
7
19
3.79
2.17
1.9
1.6
—
—
—
0
0
7
19
3.79
2.17
1.9
1.6
—
—
—
0
0
7
19
3.79
2.17
1.9
1.6
—
—
—
0
0
77
587
1.55
2.14
4.9
3.9
303.95
115.44
e6/l
0.30
59
413
27
157
1.85
2.07
3.6
3.1
7.37
7.39
ph
0.34
16
92
69
517
1.55
2.06
4.6
3.2
37.61
42.94
e6/l
0.08
56
397
10
38
2.73
2.04
1.1
1.2
—
—
—
0
0
50
350
1.60
1.99
2.4
1.8
1.33
1.35
mg/l
0.01
43
277
5
11
4.64
1.95
1.6
1.0
—
—
—
0
0
19
100
2.01
1.94
2.9
2.9
—
—
—
0
0
62
460
1.54
1.91
1.9
1.7
23.33
21.64
nmol/l
0.45
51
386
60
444
1.53
1.86
4.3
3.0
0.15
0.37
e6/l
1.86
46
320
42
289
1.60
1.78
1.3
1.3
37.32
43.92
iu/ml
0.12
17
91
84
672
1.48
1.78
4.2
3.4
6.21
6.18
ph
0.09
54
377
10
40
2.59
1.69
1.1
1.1
—
—
—
0
0
11
49
2.33
1.67
1.1
1.1
—
—
—
0
0
16
84
2.00
1.66
2.9
2.8
24.11
24.49
mmol/l
0.17
16
84
34
226
1.63
1.65
2.5
1.8
—
—
—
0
0
15
77
2.04
1.65
1.1
1.1
—
—
—
0
0
31
202
1.65
1.63
1.5
1.5
—
—
—
0
0
8
32
2.57
1.62
4.5
3.2
7.37
7.41
ph
—
8
32
8
32
2.57
1.62
3.6
1.8
60.50
61.18
%
—
8
32
142
1276
1.58
1.61
25.8
19.6
13.65
13.68
%
0.11
142
1268
46
332
1.52
1.58
1.6
1.4
2.43
2.45
g/l
0.03
34
196
87
715
1.43
1.54
8.1
6.2
1.20
1.21
mmol/l
0.58
80
663
49
363
1.48
1.48
1.3
1.3
0.98
1.24
u/ml
0.18
16
101
17
96
1.85
1.45
4.6
4.0
—
—
—
0
0
5
16
3.18
1.45
1.0
1.1
—
—
—
0
0
5
16
3.18
1.45
5.4
1.6
—
—
—
0
0
5
16
3.18
1.45
1.4
1.3
32.80
31.94
pg
—
5
16
6
22
2.79
1.44
1.3
2.0
—
—
—
0
0
98
829
1.41
1.44
4.4
3.8
0.00
0.00
estimate
-0.00
18
175
88
731
1.41
1.43
11.6
11.5
1.16
1.21
inr
0.49
73
592
16
89
1.88
1.42
2.8
2.4
0.58
0.63
%
0.35
16
89
6
23
2.66
1.38
7.8
2.9
4.54
5.02
e9/l
—
6
23
5
17
3.00
1.37
1.6
1.4
—
—
—
0
0
63
497
1.42
1.36
6.5
7.0
—
—
—
0
0
50
378
1.45
1.36
3.5
3.7
—
0.00
—
0
5
77
630
1.40
1.35
4.3
3.7
0.20
0.00
estimate
0.48
15
142
83
689
1.39
1.33
2.8
2.0
92.73
98.50
pmol/l
0.70
42
330
98
837
1.39
1.32
4.5
3.9
0.10
9.23
estimate
0.49
20
176
6
24
2.55
1.31
1.3
1.2
—
—
—
0
0
22
140
1.65
1.27
1.7
2.4
6.15
6.15
ph
0.01
13
93
21
133
1.66
1.24
1.7
1.8
—
—
—
0
0
8
37
2.22
1.23
3.6
3.0
61.59
64.32
%
—
8
37
6
26
2.35
1.19
1.0
1.1
—
—
—
0
0
27
186
1.53
1.15
1.5
1.3
—
—
—
0
0
37
274
1.44
1.12
1.2
1.3
20.42
10.71
u/ml
0.32
18
96
130
1182
1.38
1.08
5.4
4.4
14.65
14.81
pmol/l
0.31
125
1075
19
122
1.62
1.08
1.2
1.2
—
—
—
0
0
97
845
1.33
1.07
4.5
3.9
0.21
0.02
estimate
0.41
19
171
7
33
2.17
1.07
6.7
2.5
52.14
58.72
%
—
7
33
5
23
2.21
0.98
3.8
2.5
8.88
8.24
kpa
—
5
23
5
23
2.21
0.98
3.8
2.5
5.26
5.07
kpa
—
5
23
28
202
1.46
0.97
12.4
6.9
7.43
7.41
ph
0.71
12
112
48
383
1.35
0.94
2.4
2.2
2.34
2.94
mg/l
1.26
42
330
6
27
2.26
0.94
1.3
1.2
3.77
3.60
mmol/l
—
6
22
15
94
1.65
0.94
18.9
8.2
26.15
24.81
mmol/l
1.12
15
94
34
257
1.40
0.92
2.8
3.0
0.62
3.20
e6/l
2.93
15
128
17
112
1.57
0.89
1.7
1.6
1.33
1.46
g/l
0.11
17
100
8
47
1.73
0.82
2.0
1.7
31.13
38.36
nmol/l
—
8
47
8
47
1.73
0.82
1.0
1.3
—
—
—
0
0
8
48
1.70
0.80
4.0
5.7
23.29
160.10
mg/l
—
8
43
8
48
1.70
0.80
4.0
5.7
43.87
26.61
mg/l
—
8
43
56
468
1.29
0.79
4.3
3.3
0.20
0.00
estimate
0.48
15
137
20
141
1.47
0.79
14.6
7.9
—
—
—
0
0
60
507
1.28
0.78
2.9
2.5
63.37
75.79
u/l
0.42
54
472
17
116
1.52
0.77
2.6
2.3
4.17
6.65
ug/l
1.07
12
103
5
24
2.11
0.75
1.6
1.2
—
—
—
0
0
101
912
1.25
0.74
7.8
4.9
6.31
6.62
mmol/l
1.33
101
861
15
102
1.51
0.70
1.9
1.9
2.91
3.56
mmol/l
—
10
79
20
145
1.43
0.69
1.4
1.4
—
—
—
0
0
156
1493
1.39
0.67
23.6
15.4
22.23
21.84
mg/l
0.06
133
1226
28
220
1.32
0.62
1.4
1.2
—
—
—
0
0
16
114
1.44
0.61
2.8
3.1
—
—
—
0
0
0
20
0.00
0.60
0.0
2.2
—
—
—
0
0
149
1548
0.76
0.60
17.7
13.7
—
—
—
0
0
8
53
1.53
0.59
2.1
3.0
—
—
—
0
0
20
150
1.38
0.59
1.5
2.1
0.00
0.00
estimate
—
6
35
6
37
1.64
0.56
1.3
2.5
—
—
—
0
0
6
37
1.64
0.56
1.8
1.2
—
—
—
0
0
7
45
1.58
0.49
1.1
1.2
13.47
5.57
u/l
—
7
36
7
46
1.54
0.49
1.0
1.2
—
—
—
0
0
168
1640
1.54
0.47
32.3
23.6
4.47
4.48
e12/l
0.17
162
1608
168
1640
1.54
0.47
32.3
23.7
6.53
6.68
e9/l
0.43
163
1606
80
729
1.18
0.47
4.9
2.8
—
—
estimate
—
0
0
42
361
1.21
0.46
4.3
3.9
1.02
1.02
kg/l
0.95
28
227
7
51
1.39
0.44
1.1
1.5
—
—
—
0
0
5
32
1.58
0.42
1.4
2.4
19.80
36.59
umol/l
—
5
27
5
32
1.58
0.42
1.0
1.1
—
—
—
0
0
5
32
1.58
0.42
1.0
1.1
—
—
—
0
0
5
34
1.48
0.40
3.0
1.9
—
—
—
0
0
60
540
1.17
0.40
4.4
3.1
8.34
7.72
mmol/l
0.45
54
449
8
61
1.33
0.40
1.0
1.1
—
—
—
0
0
146
1409
1.21
0.39
6.5
5.4
2.09
1.91
mu/l
0.85
139
1295
20
162
1.26
0.37
2.4
1.5
—
—
—
0
0
57
516
1.15
0.35
4.3
3.2
73.87
65.43
mg/l
0.07
42
324
53
481
1.15
0.31
3.8
3.1
—
—
—
0
0
7
53
1.33
0.31
1.1
1.2
—
—
—
0
0
65
599
1.13
0.31
2.8
3.3
—
—
—
0
0
7
55
1.28
0.30
1.1
1.6
—
9.97
—
0
10
143
1469
0.86
0.28
5.7
5.2
5.80
5.96
mmol/l
1.19
136
1354
21
178
1.20
0.28
4.1
4.8
3.05
12.56
ug/l
2.45
15
146
11
86
1.30
0.27
3.5
3.1
4.39
4.42
pmol/l
0.05
11
75
9
74
1.23
0.25
1.3
1.7
—
—
—
0
0
12
98
1.24
0.22
1.4
1.3
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
11
89
1.25
0.21
1.2
1.2
—
—
—
0
0
0
12
0.00
0.21
0.0
2.0
—
7.47
—
0
12
0
13
0.00
0.21
0.0
14.8
—
869.15
—
0
13
6
49
1.23
0.20
1.2
1.4
43.88
28.63
iu/l
—
6
44
57
534
1.10
0.20
5.4
3.8
13.32
11.46
mg/mmol
0.08
41
313
49
461
1.09
0.15
1.6
1.4
—
—
—
0
0
9
79
1.15
0.15
1.7
1.8
—
—
—
0
0
62
592
1.07
0.14
4.1
4.0
25.65
35.63
ng/l
0.66
43
441
5
45
1.11
0.10
1.2
1.2
1.40
1.56
g/l
—
5
45
142
1439
0.93
0.10
4.8
4.3
1.26
1.27
mmol/l
0.03
132
1316
5
48
1.04
0.09
1.2
1.2
1.12
0.91
g/l
—
5
48
5
48
1.04
0.09
11.6
1.4
—
—
—
0
0
7
64
1.10
0.08
3.0
2.5
—
—
—
0
0
7
83
0.84
0.07
2.6
2.3
—
—
—
0
0
13
119
1.10
0.06
9.7
3.6
—
—
—
0
0
150
1512
0.95
0.05
5.3
5.0
1.44
1.48
mmol/l
0.66
144
1396
16
171
0.93
0.05
2.1
1.8
—
—
—
0
0
54
527
1.04
0.04
3.0
2.4
—
—
—
0
0
14
149
0.93
0.03
1.6
1.4
—
—
—
0
0
26
270
0.96
0.03
3.3
3.1
0.57
0.74
ug/l
0.83
18
160
153
1539
0.96
0.03
6.3
5.9
2.62
2.71
mmol/l
0.58
146
1423
26
251
1.04
0.03
1.5
1.7
1096.42
1178.95
nmol/l
0.19
19
189
15
154
0.97
0.00
1.3
1.4
—
—
—
0
0
46
461
1.00
0.00
5.4
3.8
0.00
0.00
estimate
-0.00
17
160
152
1518
1.01
0.00
5.5
5.1
4.56
4.64
mmol/l
0.39
147
1411
0
8
0.00
0.00
0.0
2.8
—
—
—
0
0
0
8
0.00
0.00
0.0
2.3
—
102.25
—
0
8
5
49
1.02
-0.00
11.6
1.3
—
—
—
0
0
5
53
0.94
-0.00
6.0
10.9
—
—
—
0
0
0
5
0.00
-0.00
0.0
2.0
—
—
—
0
0
5
53
0.94
-0.00
11.6
1.3
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.0
—
37.67
—
0
9
0
9
0.00
-0.00
0.0
2.9
—
3.93
—
0
9
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
12.2
—
0.67
—
0
9
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
139.80
—
0
5
5
52
0.96
-0.00
11.6
1.3
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
3.0
—
—
—
0
0
5
52
0.96
-0.00
11.6
1.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
111.67
—
0
6

Mortality – FinRegistry

Association

Association between endpoint L12_OTHERINFILTRATIVESKIN and mortality.

Females

Parameter HR [95% CI] p-value
L12_OTHERINFILTRATIVESKIN 1.16 [0.89, 1.5] 0.264
Birth year 0.994 [0.99, 1.0] 0.159

During the follow-up period (1.1.1998 — 31.12.2019), 82 out of 583 females with L12_OTHERINFILTRATIVESKIN died.

Males

Parameter HR [95% CI] p-value
L12_OTHERINFILTRATIVESKIN 1.305 [0.99, 1.71] 0.055
Birth year 0.984 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 86 out of 442 males with L12_OTHERINFILTRATIVESKIN died.

Mortality risk

Mortality risk for people of age

years, who have L12_OTHERINFILTRATIVESKIN.

N-year risk Females Males
1 0.082% 0.224%
5 0.767% 1.307%
10 1.624% 3.239%
15 3.128% 6.275%
20 5.646% 10.793%

Relationships between endpoints

Index endpoint: L12_OTHERINFILTRATIVESKIN – Other infiltrative disorders of skin and subcutaneous tissue

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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