amyloidosis: A disorder characterized by the localized or diffuse accumulation of amyloid protein in various anatomic sites. It may be primary, due to clonal plasma cell proliferations; secondary, due to long standing infections, chronic inflammatory disorders, or malignancies; or familial. It may affect the nerves, skin, tongue, joints, heart, liver, spleen, kidneys and adrenal glands.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
519870 |
1. Apply sex-specific ruleNone |
519870 |
2. Check conditionsNone |
519870 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
191 |
4. Check minimum number of eventsNone |
191 |
5. Include endpointsNone |
191 |
6. Filter based on genotype QC (FinnGen only) |
187 |
Control definitions (FinnGen only)
- Control exclude
- E4_METABOLIA
Extra metadata
- Level in the ICD hierarchy
- 4
- First used in FinnGen datafreeze
- DF2
- Parent code in ICD-10
- E85
- Name in latin
- Amyloidosis in uno organo
Similar endpoints
↥List of similar endpoints to
Organ-limited amyloidosis
based on the number of shared cases.
Similar with more cases:
- Amyloidosis
- Metabolic disorders
- Endocrine, nutritional and metabolic diseases
- Any prescribed medicine buy
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥Summary Statistics
↥-FinRegistry-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | |||
| Whole population | 1581 | 719 | 850 |
| Only index persons | 1221 | 545 | 676 |
| Unadjusted period prevalence (%) | |||
| Whole population | 0.02 | 0.02 | 0.02 |
| Only index persons | 0.02 | 0.02 | 0.03 |
| Median age at first event (years) | |||
| Whole population | 83.24 | 84.01 | 82.64 |
| Only index persons | 83.19 | 84.14 | 82.43 |
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 187 | 69 | 118 |
| Unadjusted period prevalence (%) | 0.04 | 0.02 | 0.05 |
| Median age at first event (years) | 78.02 | 72.46 | 81.27 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
-FinnGen-
Cumulative Incidence Function
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 191
- Matched controls
- 1910
TimeCodeWAS
↥TODO / Current known limitations:
- Only showing the top 500 codes, because showing all (sometimes 20k) makes the page too slow.
- Legend / how to read the glyphs.
- Proper column names.
- Show details (e.g. Fisher or Chi-square test, N cases and N controls) when clicking on a row.
- Explanation on the underlying data / how the TimeCodeWAS is done (e.g. matched cases / controls, eligibility).
- Download CSV not working.
- No filters and sorters.
- Limited amount of endpoints with TimeCodeWAS data.
- Cross-links to Risteys lab test pages for lab test codes.
I43.1*E85.9 (2000502511)
E85.9 (45571695)
E85.89 (2000501545)
E85.4 (45557143)
I61.1 (45562360)
GD1UA (2001303652)
26484-6 (3001604)
14631-6 (3006140)
26444-0 (3006315)
26449-9 (3013115)
751-8 (3013650)
14749-6 (3013826)
19072-8 (3016431)
1995-0 (3021347)
715-3 (3021589)
6768-6 (3035995)
J18.9 (45601123)
W01 (45756243)
ER (9203)
1988-5 (3020460)
I50.0 (45567179)
I50.9 (45576879)
GD1QA (2001303648)
2951-2 (3019550)
2823-3 (3023103)
34714-6 (3032080)
14879-1 (3003458)
14682-9 (3020564)
82 (38004501)
62238-1 (40764999)
GD1AA (2001303617)
20570-8 (3009542)
26515-7 (3007461)
28539-5 (3035941)
26464-8 (3010813)
30428-7 (3024731)
26453-1 (3026361)
718-7 (3000963)
OP (9202)
58410-2 (40761511)
34487-9 (3044938)
34531-4 (3044640)
5894-1 (3033658)
ERIP (262)
6598-7 (3019800)
33762-6 (3029187)
14804-9 (3022250)
15189-4 (3007778)
36916-5 (3034860)
33944-0 (3047169)
57778-3 (40760888)
600-7 (3023368)
21 (8717)
28540-3 (3003338)
N02AA05 (21604260)
2157-6 (3007220)
1751-7 (3024561)
22 (8756)
1 (38004446)
2472-9 (3028026)
OMOP4822461 (32036)
11 (38004456)
1798-8 (3016771)
890-4 (3001079)
3034-6 (3004789)
2753-2 (3018418)
60517-0 (40763571)
39 (38004479)
95941-1 (36031861)
C03DA01 (21601534)
69738-3 (42870588)
IP (9201)
93 (38004510)
14798-3 (3022948)
30248-9 (3015399)
26485-3 (3019069)
6 (38004451)
I25.1 (45596196)
30180-4 (3022096)
26478-8 (3002030)
26450-7 (3006504)
13 (38004458)
26474-7 (3019198)
51483-6 (3030467)
A12BA01 (21600877)
24351-9 (3004588)
94500-6 (706163)
26511-6 (3018010)
C03CA01 (21601518)
2000-8 (3015377)
2465-3 (3005719)
2885-2 (3020630)
51480-2 (3031040)
11524-6 (3013512)
117617002 (4035726)
OMOP4822459 (581476)
22664-7 (3020779)
251B00000X (38004193)
24357-6 (3037467)
2276-4 (3001122)
2458-8 (3007164)
14979-9 (3018677)
A07EA01 (21600653)
H02AB06 (21602734)
43409-2 (3042936)
81231-3 (21494890)
I10 (45591453)
A02BC02 (21600097)
2601-3 (3012095)
1742-6 (3006923)
25700-6 (3037756)
30385-9 (3002385)
77397-8 (46236098)
LabWAS
↥Mortality – FinRegistry
↥Association
Association between endpoint E4_AMYL_ORGAN and mortality.
Females
No dataMales
No dataMortality risk
Mortality risk for people of age
years, who have E4_AMYL_ORGAN.| N-year risk | Females | Males |
|---|---|---|
| 1 | No data | No data |
| 5 | No data | No data |
| 10 | No data | No data |
| 15 | No data | No data |
| 20 | No data | No data |
Relationships between endpoints
↥Index endpoint: E4_AMYL_ORGAN – Organ-limited amyloidosis
GWS hits: -