Carcinoma in situ of middle ear and respiratory system

CD2_INSITU_EAR_RESP

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D02
  • Cause of death: ICD-10 D02

2 out of 7 registries used, show all original rules.

95

4. Check minimum number of events

None

95

5. Include endpoints

182

6. Filter based on genotype QC (FinnGen only)

161

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
2
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
D00-D09
Name in latin
Carcinoma in situ auris mediae sive systematis respiratorii

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 161 44 117
Unadjusted period prevalence (%) 0.04 0.02 0.05
Median age at first event (years) 68.80 67.26 69.39

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
165
Matched controls
1650
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
D02.0
ICD-10 Finland
Carcinoma in situ: Larynx
+∞
58.9
53
*
DQB10
NOMESCO Finland
Endoscopic excision of lesion of larynx
118.3
48.0
50
6
C32.0
ICD-10 Finland
Malignant neoplasm: Glottis
130.1
45.6
47
5
UDQ12
NOMESCO Finland
Flexible laryngoscopy
9.7
31.8
43
58
DQA10
NOMESCO Finland
Biopsy of larynx
78.7
29.1
32
5
ZXC10
NOMESCO Finland
Use of laser
33.9
25.7
33
12
D14.1
ICD-10 Finland
Benign neoplasm: Larynx
51.9
25.6
30
7
C32.9
ICD-10 Finland
Malignant neoplasm: Larynx, unspecified
+∞
22.4
21
*
8070/3-C32.9
ICD-O-3
Squamous cell carcinoma, NOS, of larynx, NOS
252.0
22.2
22
*
UDQ22
NOMESCO Finland
Microlaryngoscopy
51.0
22.1
26
6
D38.1
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Trachea, bronchus and lung
9.0
21.5
29
38
J38.3
ICD-10 Finland
Other diseases of vocal cords
31.9
20.8
27
10
8140/2-C34.1
ICD-O-3
Adenocarcinoma in situ, NOS, of upper lobe, lung
+∞
20.2
19
*
R91
ICD-10 Finland
Abnormal findings on diagnostic imaging of lung
5.0
19.1
53
143
D38.0
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Larynx
50.4
18.8
22
5
C320, 8077, 2
ICD-O-3
+∞
18.0
17
*
UGC12
NOMESCO Finland
Flexible bronchoscopy
5.4
17.4
41
96
WF002
NOMESCO Finland
Radical radiotherapy
6.1
17.3
34
67
C34.12
ICD-10 Finland
Malignant tumor of the anterior, bronchial or pulmonary adenocarcinoma
45.1
16.8
20
5
J37.0
ICD-10 Finland
Chronic laryngitis
13.8
16.3
28
24
EP1AE
NOMESCO Finland
Neck ultrasound examination
7.0
15.7
26
43
8070/2-C32.0
ICD-O-3
Squamous cell carcinoma in situ, NOS, of glottis
+∞
13.7
13
*
D02.2
ICD-10 Finland
Carcinoma in situ: Bronchus and lung
+∞
13.7
13
*
D02.3
ICD-10 Finland
Carcinoma in situ: Other parts of respiratory system
+∞
12.7
12
*
UDH02
NOMESCO Finland
Rhinopharyngoscopy
5.5
11.9
25
52
GD1CT
NOMESCO Finland
Biopsy of the lung with CT guidance
15.2
11.8
19
14
DQB30
NOMESCO Finland
Laryngectomy
70.1
11.8
13
*
WX734
NOMESCO Finland
JET-ventilation
+∞
11.6
11
*
UJC01
NOMESCO Finland
Scopy of lower throat
17.1
11.1
17
11
DQE00
NOMESCO Finland
Implantation of prosthetic replacement for larynx
64.3
10.8
12
*
DQB70
NOMESCO Finland
Total excision of vocal cord
117.2
10.5
11
*
WZC00
NOMESCO Finland
Treatment plan or consultation
2.9
10.4
78
387
GDB21
NOMESCO Finland
Thoracoscopic segmental resection of lung
+∞
9.5
9
*
130
Kela drug reimbursment
Malignant tumour
3.5
9.0
36
122
GD1BD
NOMESCO Finland
Thorax extensive CT-examination
4.4
9.0
24
61
XX3DW
NOMESCO Finland
Time consuming IT work
3.4
9.0
38
134
8070/3-C32.0
ICD-O-3
Squamous cell carcinoma, NOS, of glottis
94.7
8.5
9
*
C32.1
ICD-10 Finland
Malignant neoplasm: Supraglottis
94.7
8.5
9
*
2310A
ICD-9 Finland
Carcinoma in situ of respiratory system, Larynx
+∞
8.4
8
*
EN1BD
NOMESCO Finland
Very extensive CT examination of mouth and soft tissues of neck
14.0
8.0
13
10
C34.90
ICD-10 Finland
Malignant tumor in unspecified location in bronchus and lung without histology
11.6
7.4
13
12
8070/2-C32.9
ICD-O-3
Squamous cell carcinoma in situ, NOS, of larynx, NOS
+∞
7.3
7
*
YA1BD
NOMESCO Finland
Extensive CT examination of head and neck for dose design of radiotherapy
31.5
7.2
9
*
A07AA02
ATC
nystatin; oral
4.3
6.9
19
49
R49.0
ICD-10 Finland
Dysphonia
13.0
6.7
11
9
WX402
NOMESCO Finland
General anaesthesia
2.7
6.7
42
184
WZC20
NOMESCO Finland
Multidisciplinary treatment meeting
3.9
6.5
20
56
C32.8
ICD-10 Finland
Malignant neoplasm: Overlapping lesion of larynx
72.5
6.5
7
*
GD1AD
NOMESCO Finland
Thorax CT examination
3.7
6.4
21
62
8140/2-C34.3
ICD-O-3
Adenocarcinoma in situ, NOS, of lower lobe, lung
+∞
6.3
6
*

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
86
506
2.46
7.46
3.8
2.2
—
—
—
0
0
32
124
2.96
6.34
1.8
1.4
—
—
—
0
0
69
478
1.76
3.08
4.0
3.3
2.35
2.35
mmol/l
0.11
64
422
67
465
1.74
2.94
2.8
2.8
—
—
—
0
0
38
222
1.92
2.91
1.7
2.1
—
—
—
0
0
96
738
1.72
2.90
18.5
15.4
1.28
1.31
inr
0.19
86
626
23
111
2.25
2.89
2.8
4.9
0.00
0.21
%
0.49
12
38
9
23
4.08
2.82
2.2
4.6
—
—
—
0
0
27
148
1.99
2.47
1.3
1.6
—
—
—
0
0
82
624
1.62
2.43
3.2
3.1
—
—
estimate
—
0
0
27
153
1.91
2.25
3.2
4.2
7.38
7.35
ph
0.69
21
104
23
124
1.99
2.20
2.9
4.2
0.33
0.98
%
1.95
12
51
92
734
1.57
2.15
7.0
7.6
1.20
1.20
mmol/l
0.03
82
631
21
114
1.96
1.98
2.8
4.2
0.00
0.48
%
—
10
42
21
115
1.95
1.93
2.9
4.4
0.00
0.14
%
—
10
42
37
242
1.68
1.93
4.1
5.5
—
—
—
0
0
91
737
1.52
1.90
11.9
10.7
4.42
4.34
e9/l
0.14
81
638
7
23
3.13
1.82
1.6
2.6
0.90
0.95
%
—
7
17
9
36
2.58
1.77
6.2
3.1
—
—
—
0
0
6
18
3.42
1.76
1.5
2.0
86.43
91.20
%
—
6
18
12
58
2.15
1.53
5.7
3.0
4.28
4.22
pmol/l
0.09
12
47
28
181
1.66
1.53
1.4
1.3
—
—
—
0
0
6
22
2.79
1.45
1.3
1.2
—
—
—
0
0
76
619
1.42
1.41
6.6
5.7
61.45
59.04
%
0.89
70
585
18
107
1.77
1.32
4.2
4.2
—
—
—
0
0
75
617
1.40
1.29
7.0
5.9
2.38
2.75
%
1.14
69
576
76
629
1.39
1.25
7.1
5.9
24.28
25.10
%
0.26
69
593
74
613
1.38
1.20
7.1
6.0
0.64
0.60
%
0.21
68
572
60
483
1.38
1.15
6.8
5.7
—
—
—
0
0
74
620
1.35
1.10
7.1
6.0
9.50
9.06
%
0.50
68
580
5
22
2.31
1.04
1.4
2.6
35.80
32.64
pg
—
5
22
16
100
1.66
1.01
1.7
1.6
—
—
—
0
0
39
298
1.40
1.01
3.0
3.3
565.34
554.64
mosm/kgh2o
0.09
32
259
79
682
1.30
0.91
6.5
5.9
1.77
1.78
e9/l
0.02
68
597
78
673
1.30
0.90
6.5
5.8
0.04
0.04
e9/l
0.33
66
568
52
428
1.31
0.84
4.5
4.5
7.40
7.39
ph
0.11
41
309
77
670
1.28
0.81
6.5
5.8
0.65
0.61
e9/l
0.61
65
565
23
166
1.45
0.81
1.6
2.0
—
—
—
0
0
5
96
0.51
0.81
1.4
1.2
—
—
—
0
0
6
33
1.85
0.80
1.2
1.0
—
—
—
0
0
5
25
2.03
0.73
1.2
1.2
—
—
—
0
0
78
688
1.25
0.71
6.6
6.1
0.18
0.19
e9/l
0.32
69
591
5
26
1.95
0.71
3.8
2.4
62.62
61.71
%
—
5
26
41
334
1.30
0.71
3.0
2.8
7.31
3.73
e6/l
0.52
35
303
55
471
1.25
0.64
4.8
4.8
—
—
—
0
0
61
531
1.24
0.61
6.2
4.4
—
—
—
0
0
0
21
0.00
0.60
0.0
1.2
—
—
—
0
0
54
469
1.23
0.55
3.5
3.3
7.10
7.56
mmol/l
0.50
42
384
17
126
1.39
0.54
1.2
1.5
—
—
—
0
0
35
291
1.26
0.52
1.9
1.7
1197.68
1130.57
nmol/l
0.22
30
216
19
244
0.75
0.51
1.2
1.4
2.77
2.55
g/l
0.22
13
134
49
426
1.21
0.49
2.9
3.4
—
—
—
0
0
104
1108
0.83
0.49
4.7
4.7
1.19
1.25
mmol/l
0.55
91
995
59
523
1.20
0.48
3.7
4.3
369.22
72.89
e6/l
0.77
41
383
21
165
1.31
0.48
2.5
3.9
7.38
7.39
ph
—
10
98
55
486
1.20
0.47
4.6
4.1
4.09
8.56
mg/mmol
1.61
30
317
23
184
1.29
0.46
1.4
1.3
—
—
—
0
0
19
148
1.32
0.46
4.2
6.5
9.63
10.93
mmol/l
0.32
19
143
25
304
0.79
0.46
4.4
4.6
1.02
1.02
kg/l
0.27
19
214
25
303
0.79
0.44
2.1
1.8
446.68
442.09
pmol/l
0.02
19
254
5
31
1.63
0.43
1.0
1.2
13.98
58.40
u/l
—
5
26
5
31
1.63
0.43
1.8
3.4
—
—
—
0
0
5
31
1.63
0.43
1.2
1.1
—
—
—
0
0
53
470
1.19
0.43
3.5
3.3
38.72
52.48
mg/l
0.26
32
321
15
114
1.35
0.42
5.1
3.9
—
—
—
0
0
22
267
0.80
0.40
1.3
1.2
0.71
1.78
u/ml
—
7
64
95
890
1.16
0.38
5.8
4.1
15.32
15.06
pmol/l
0.44
86
772
42
474
0.85
0.37
1.8
2.1
1.32
1.26
mmol/l
0.22
33
379
11
145
0.74
0.36
1.2
1.5
—
—
—
0
0
19
154
1.26
0.36
1.7
1.3
—
—
—
0
0
15
188
0.78
0.35
1.8
1.3
43.16
37.85
iu/ml
—
7
68
12
91
1.34
0.35
2.3
4.0
24.35
23.95
mmol/l
0.24
12
91
46
411
1.17
0.34
3.2
3.4
0.59
0.53
e6/l
0.09
35
304
88
935
0.87
0.34
34.8
25.6
14.20
13.98
%
0.78
88
925
10
74
1.37
0.33
3.4
2.5
—
—
—
0
0
20
165
1.24
0.33
2.4
4.0
6.07
5.76
kpa
0.72
20
156
6
47
1.29
0.32
1.5
5.1
—
—
—
0
0
62
569
1.14
0.32
18.5
13.2
0.00
0.00
e9/l
0.45
46
461
73
678
1.14
0.32
3.5
4.2
0.00
0.00
estimate
-0.00
21
148
17
140
1.24
0.29
4.6
10.5
—
—
—
0
0
27
309
0.85
0.28
3.6
4.2
—
0.40
—
0
5
18
150
1.22
0.28
1.9
2.8
3.11
6.35
e9/l
1.12
13
116
33
293
1.16
0.27
1.7
1.7
1.02
1.71
mg/l
1.32
24
234
14
170
0.81
0.26
1.4
1.3
45.38
8.06
u/ml
—
6
58
114
1182
0.89
0.26
5.9
6.5
2.31
2.51
mmol/l
1.59
102
1074
12
96
1.27
0.25
1.8
1.6
—
—
—
0
0
13
106
1.25
0.24
1.1
1.5
—
—
—
0
0
73
688
1.11
0.23
3.5
4.2
0.00
10.61
estimate
0.50
20
153
52
481
1.12
0.23
3.4
3.5
127.95
199.49
e6/l
0.20
40
372
11
135
0.80
0.23
2.5
2.9
0.58
0.25
e6/l
0.32
11
129
68
640
1.11
0.22
2.3
2.3
94.96
93.47
pmol/l
0.10
50
334
35
385
0.88
0.22
8.3
6.6
—
—
—
0
0
5
41
1.23
0.22
1.0
1.3
—
—
—
0
0
44
405
1.12
0.21
4.3
4.2
0.00
0.02
estimate
0.50
15
131
0
11
0.00
0.21
0.0
1.0
—
340.67
—
0
6
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
11
0.00
0.21
0.0
1.5
—
1.58
—
0
11
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
35.40
—
0
5
0
10
0.00
0.21
0.0
1.3
—
28.02
—
0
10
45
415
1.12
0.21
2.8
2.1
3.15
3.05
mg/l
0.08
39
354
0
12
0.00
0.21
0.0
1.5
—
0.77
—
0
12
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
0
14
0.00
0.20
0.0
2.2
—
—
—
0
0
16
137
1.19
0.19
2.3
3.2
4.80
4.31
kpa
0.59
16
129
23
204
1.15
0.19
6.3
8.1
7.39
7.42
ph
0.92
13
115
49
459
1.10
0.17
1.7
1.9
26.54
20.87
nmol/l
0.28
42
373
5
67
0.74
0.17
1.6
1.9
—
0.00
estimate
—
0
22
112
1151
0.92
0.17
5.2
5.5
1.42
1.42
mmol/l
0.06
99
1040
123
1200
1.10
0.17
26.3
20.6
30.51
28.18
mg/l
0.32
111
1027
38
352
1.10
0.16
2.5
3.2
383.44
351.58
umol/l
0.74
27
303
73
698
1.08
0.16
3.5
4.3
0.00
0.00
estimate
-0.00
19
136
6
79
0.75
0.16
2.2
2.5
—
—
—
0
0
14
121
1.17
0.15
2.1
2.2
8.15
12.98
nmol/l
1.84
14
104
40
375
1.09
0.14
3.5
3.7
0.00
0.00
estimate
-0.00
15
116
56
533
1.08
0.13
3.3
3.9
6.12
6.20
ph
0.29
30
306
10
117
0.85
0.13
6.7
10.9
94.97
93.94
%
—
10
117
65
626
1.06
0.11
6.8
4.8
37.11
48.19
ng/l
0.43
58
495
35
371
0.93
0.11
4.1
3.7
—
—
—
0
0
118
1202
0.94
0.11
27.6
18.2
—
—
—
0
0
115
1172
0.94
0.10
6.2
5.7
6.21
6.16
mmol/l
0.16
102
1055
22
238
0.91
0.10
2.5
3.4
1.79
2.07
e6/l
—
10
124
5
43
1.17
0.10
2.2
1.5
—
15.27
—
0
7
15
135
1.12
0.10
1.7
3.0
67.13
66.31
g/l
0.16
15
126
28
262
1.08
0.10
2.4
1.9
28.89
29.50
s
0.23
28
250
5
46
1.09
0.09
1.0
1.1
—
—
—
0
0
11
97
1.14
0.09
3.2
3.0
—
—
—
0
0
16
146
1.11
0.08
1.1
1.3
208.00
407.78
titre
—
5
36
39
408
0.94
0.08
3.8
3.4
0.92
0.82
ug/l
0.48
32
292
5
64
0.77
0.08
1.2
1.3
—
—
—
0
0
7
66
1.06
0.08
1.0
1.4
—
—
—
0
0
7
66
1.06
0.08
4.9
4.7
36.77
37.00
°c
—
7
66
114
1158
0.95
0.08
5.1
5.6
4.26
4.36
mmol/l
0.44
103
1054
34
324
1.06
0.07
1.6
1.4
—
—
—
0
0
12
131
0.91
0.06
2.0
2.1
117.20
155.61
ug/g
—
5
113
53
516
1.04
0.05
4.0
4.4
0.00
0.03
estimate
0.50
17
120
112
1107
1.04
0.04
7.1
5.1
1.98
2.01
mu/l
0.10
101
972
26
254
1.03
0.00
2.5
2.5
2.26
2.22
g/l
0.17
26
236
23
226
1.02
0.00
2.2
2.4
1.67
1.79
%
0.30
23
200
114
1144
0.99
0.00
8.7
7.4
40.38
40.87
mmol/mol
0.28
104
1055
29
285
1.02
0.00
5.5
3.9
156.03
303.96
ng/l
0.46
23
241
70
703
0.99
0.00
6.7
6.1
3.26
2.75
ug/l
0.23
62
611
12
115
1.05
0.00
1.8
2.4
—
—
—
0
0
0
8
0.00
0.00
0.0
2.3
—
90.25
—
0
8
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
0
8
0.00
0.00
0.0
1.6
—
—
—
0
0
0
6
0.00
-0.00
0.0
3.7
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.6
—
—
—
0
0
6
69
0.86
-0.00
1.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
2.1
—
2.82
—
0
9
0
5
0.00
-0.00
0.0
1.8
—
10.08
—
0
5
0
9
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
296.71
—
0
7
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
2.4
—
—
—
0
0
0
9
0.00
-0.00
0.0
2.1
—
1.68
—
0
9
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
7
0.00
-0.00
0.0
2.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
6
62
0.97
-0.00
2.5
2.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
2.9
—
2142.86
—
0
7
0
9
0.00
-0.00
0.0
1.1
—
146.56
—
0
9
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.8
—
43.22
—
0
9
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
41.00
—
0
5
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: CD2_INSITU_EAR_RESP – Carcinoma in situ of middle ear and respiratory system

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).