This is a non-core endpoint: only basic statistics are computed.
Chondrosarcoma
C3_CHONDROSARCOMA
No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
519870 |
1. Apply sex-specific ruleNone |
519870 |
2. Check conditionsNone |
519870 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
2 out of 7 registries used, show all original rules. |
113 |
4. Check minimum number of eventsNone |
113 |
5. Include endpointsNone |
113 |
6. Filter based on genotype QC (FinnGen only) |
111 |
Control definitions (FinnGen only)
- Control exclude
- C3_CANCER, C3_CANCER_WIDE
Extra metadata
- First used in FinnGen datafreeze
- DF8
Similar endpoints
↥List of similar endpoints to
Chondrosarcoma
based on the number of shared cases.
Similar with more cases:
- Chondrosarcoma, including Hilmo
- Solid cancers
- Malignant neoplasm
- Malignant neoplasm
- Solid cancers, including Hilmo
Similar with less cases:
None
Case counts by codes
↥Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 111 | 50 | 61 |
| Unadjusted period prevalence (%) | 0.02 | 0.02 | 0.03 |
| Median age at first event (years) | 56.23 | 54.63 | 57.55 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 113
- Matched controls
- 1130
TimeCodeWAS
↥TODO / Current known limitations:
- Only showing the top 500 codes, because showing all (sometimes 20k) makes the page too slow.
- Legend / how to read the glyphs.
- Proper column names.
- Show details (e.g. Fisher or Chi-square test, N cases and N controls) when clicking on a row.
- Explanation on the underlying data / how the TimeCodeWAS is done (e.g. matched cases / controls, eligibility).
- Download CSV not working.
- No filters and sorters.
- Limited amount of endpoints with TimeCodeWAS data.
- Cross-links to Risteys lab test pages for lab test codes.
D48.0 (45586112)
C40.22 (2000500655)
R4110 (2001310233)
WX408 (2001310808)
90 (38004507)
C41.32 (2000500699)
50373000 (4177340)
60621009 (4245997)
ZXD10 (2001311387)
890-4 (3001079)
9220/3-C41.3 (36526470)
9220/3-C40.2 (36548029)
261QX0200X (38004268)
4 (38004449)
20 (38004465)
62238-1 (40764999)
66121-5 (40768804)
21 (8717)
22 (8756)
IP (9201)
OP (9202)
2 (38004447)
ER (9203)
2951-2 (3019550)
2823-3 (3023103)
14682-9 (3020564)
1988-5 (3020460)
30385-9 (3002385)
N02BE01 (21604344)
58410-2 (40761511)
26515-7 (3007461)
30428-7 (3024731)
28539-5 (3035941)
26464-8 (3010813)
20570-8 (3009542)
718-7 (3000963)
26453-1 (3026361)
GD1AA (2001303617)
28540-3 (3003338)
OMOP4822461 (32036)
LabWAS
↥Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: C3_CHONDROSARCOMA – Chondrosarcoma
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).