Small plaque parapsoriasis

L12_PARAPSO_PLAQUE

parapsoriasis: one of a group of skin disorders that are characterized primarily by their resemblance to psoriasis (red, scaly lesions), rather than by their underlying etiology. Neoplasms can develop from parapsoriasis. For example, it can develop into cutaneous T-cell lymphoma.

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Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L41.3, L41.4, L41.5
  • Hospital discharge: ICD-9 6962C
  • Cause of death: ICD-10 L41.3, L41.4, L41.5
  • Cause of death: ICD-9 6962C

2 out of 7 registries used, show all original rules.

114

4. Check minimum number of events

None

114

5. Include endpoints

None

114

6. Filter based on genotype QC (FinnGen only)

99

Control definitions (FinnGen only)

Control exclude
L12_PAPULOSQUAMOUS

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 705 263 436
Only index persons 632 248 384
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.01
Only index persons 0.01 0.01 0.01
Median age at first event (years)
Whole population 64.16 63.44 64.43
Only index persons 63.20 62.86 63.43

-FinnGen-

Key figures

All Female Male
Number of individuals 99 40 59
Unadjusted period prevalence (%) 0.02 0.01 0.03
Median age at first event (years) 63.30 63.57 63.13

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
102
Matched controls
1020
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
L41.3
ICD-10 Finland
Small plaque parapsoriasis
+∞
74.3
62
*
TQX10
NOMESCO Finland
Biopsy of skin and subcutaneous tissue
31.4
72.5
65
54
L41.4
ICD-10 Finland
Large plaque parapsoriasis
+∞
45.2
40
*
D07AC01
ATC
betamethasone; topical
10.4
29.0
76
224
L41.9
ICD-10 Finland
Parapsoriasis, unspecified
+∞
26.2
24
*
E0000UV, ,
ATC
9.5
24.3
80
283
D07AB02
ATC
hydrocortisone butyrate; topical
7.0
21.9
63
191
D07AB08
ATC
desonide; topical
8.2
21.0
35
61
WXQ27
NOMESCO Finland
UVB narrow spectrum light therapy
+∞
18.3
17
*
E000001, ,
ATC
6.0
17.3
43
110
L30.9
ICD-10 Finland
Dermatitis, unspecified
5.8
16.7
43
113
D07AC13
ATC
mometasone; topical
5.5
16.7
56
185
E000002, ,
ATC
7.5
16.4
28
49
L40.0
ICD-10 Finland
Psoriasis vulgaris
101.0
16.1
17
*
L41.8
ICD-10 Finland
Other parapsoriasis
+∞
16.0
15
*
D07AD01
ATC
clobetasol; topical
5.8
15.2
36
87
D07AA02
ATC
hydrocortisone; topical
5.4
13.2
33
83
L41.1
ICD-10 Finland
Pityriasis lichenoides chronica
+∞
12.8
12
*
C84.0
ICD-10 Finland
Mycosis fungoides
134.6
11.7
12
*
D05BB02
ATC
acitretin; oral
61.0
9.9
11
*
D05AX02
ATC
calcipotriol; topical
30.5
8.7
11
*
Z01.5
ICD-10 Finland
Diagnostic skin and sensitization tests
4.9
8.2
20
48
D01AC20
ATC
imidazoles/triazoles in combination with corticosteroids; topical
3.5
8.0
38
148
ZXC50
NOMESCO Finland
Cryotherapy
10.6
7.6
14
15
L40.9
ICD-10 Finland
Psoriasis, unspecified
+∞
7.4
7
*
QAA25
NOMESCO Finland
Destruction of lesion of head or neck
15.2
7.1
11
8
XQ848
NOMESCO Finland
Dermatological photography
9.7
6.8
13
15
9700/3-C44.9
ICD-O-3
Mycosis fungoides of skin, NOS
+∞
6.3
6
*

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
36
27
20.06
40.40
1.6
1.2
—
—
—
0
0
62
278
4.14
11.32
8.5
4.8
—
—
—
0
0
70
413
3.22
7.10
11.5
5.8
29.33
27.90
%
0.44
70
391
66
392
2.94
6.34
11.7
13.4
0.00
0.01
e9/l
0.20
57
320
15
47
3.57
4.25
1.1
1.7
—
—
—
0
0
47
278
2.28
3.98
3.4
4.3
7.40
7.40
ph
0.40
28
202
6
5
12.62
3.81
1.7
2.8
0.33
0.60
index
—
6
5
22
93
2.74
3.81
1.8
1.5
—
—
—
0
0
45
277
2.12
3.33
6.1
6.4
—
—
—
0
0
8
16
5.33
3.12
1.8
1.3
—
—
—
0
0
21
100
2.39
2.83
1.5
1.3
—
—
—
0
0
8
22
3.85
2.42
2.9
2.3
425.00
308.87
ug/l
—
8
22
9
28
3.42
2.37
1.0
1.1
—
—
—
0
0
17
80
2.35
2.34
1.2
1.5
—
—
—
0
0
21
112
2.10
2.16
1.4
1.8
—
—
—
0
0
7
20
3.68
2.09
1.6
1.2
—
—
—
0
0
23
130
1.99
2.03
2.4
2.0
—
—
—
0
0
19
100
2.11
2.02
1.5
1.6
—
—
—
0
0
38
257
1.76
1.93
5.0
4.4
—
—
—
0
0
19
102
2.06
1.92
1.6
1.4
—
—
—
0
0
61
472
1.73
1.91
4.2
4.3
0.00
15.77
estimate
0.50
13
103
32
207
1.80
1.88
5.0
6.2
—
—
—
0
0
57
435
1.70
1.86
23.4
15.9
1.45
1.27
inr
1.01
48
365
61
476
1.70
1.82
4.3
4.3
0.00
0.00
estimate
-0.00
13
89
60
469
1.68
1.75
4.2
4.2
0.00
0.00
estimate
-0.00
13
99
22
129
1.90
1.74
1.3
1.4
0.96
13.66
u/ml
—
5
50
5
13
3.99
1.73
1.0
1.5
—
—
—
0
0
29
189
1.75
1.64
2.0
1.7
0.70
1.14
mg/l
1.41
22
156
7
26
2.81
1.61
1.3
1.2
—
—
—
0
0
67
550
1.64
1.53
5.5
5.0
—
372.36
—
0
14
94
855
2.27
1.53
31.8
23.7
77.20
82.10
umol/l
1.53
94
846
16
89
1.95
1.47
2.6
3.2
68.25
69.18
e9/l
—
10
69
17
97
1.90
1.46
1.3
1.6
—
—
—
0
0
17
97
1.90
1.46
1.8
3.6
7.39
7.38
ph
—
10
61
22
137
1.77
1.44
2.9
3.2
0.67
2.53
e6/l
1.25
11
66
20
121
1.81
1.44
2.8
7.0
2.19
1.03
mmol/l
0.59
13
102
20
121
1.81
1.44
2.8
7.0
7.41
7.41
ph
—
9
71
43
321
1.59
1.43
3.0
2.1
—
—
—
0
0
19
114
1.82
1.40
1.2
1.3
—
—
—
0
0
45
342
1.57
1.38
2.2
2.0
1.44
1.30
mmol/l
0.43
39
282
29
198
1.65
1.38
1.9
3.0
523.53
522.93
mosm/kgh2o
0.00
19
168
12
62
2.06
1.34
1.5
3.6
10.99
9.53
g/l
0.65
12
54
37
272
1.57
1.30
3.5
3.3
—
—
—
0
0
48
375
1.53
1.28
3.1
3.9
5.93
6.30
ph
1.08
21
216
87
782
1.77
1.21
5.6
5.4
4.50
4.48
mmol/l
0.06
79
724
12
65
1.96
1.19
1.5
1.2
—
—
—
0
0
28
197
1.58
1.17
3.5
4.8
1.01
1.02
kg/l
1.26
16
137
5
20
2.57
1.16
1.0
1.1
—
58.00
—
0
5
22
147
1.63
1.13
1.6
1.7
1176.72
1335.73
nmol/l
0.40
17
114
16
99
1.73
1.08
1.4
1.3
—
—
—
0
0
82
733
1.61
1.07
5.9
5.2
1.91
2.03
mu/l
0.30
76
665
91
836
1.82
1.06
17.4
15.6
—
—
—
0
0
86
780
1.65
1.03
5.5
5.3
1.37
1.42
mmol/l
0.54
76
719
57
476
1.45
1.03
7.2
7.0
12.86
11.81
umol/l
0.43
57
450
85
769
1.63
1.02
5.6
5.4
5.91
6.08
mmol/l
0.65
77
705
9
52
1.80
0.95
1.4
2.0
1.14
1.28
g/l
—
9
45
13
79
1.74
0.93
3.8
2.3
—
—
—
0
0
23
164
1.52
0.90
1.4
1.6
2.93
3.02
g/l
0.05
16
92
8
44
1.89
0.88
4.1
3.4
4.79
4.37
pmol/l
—
8
36
69
607
1.42
0.87
4.8
4.2
15.34
15.00
pmol/l
0.56
63
550
87
801
1.59
0.85
6.9
6.2
2.76
2.58
mmol/l
1.00
79
740
6
32
1.93
0.83
3.0
2.2
—
—
—
0
0
8
47
1.76
0.83
1.1
1.3
—
—
—
0
0
46
381
1.38
0.82
3.2
2.8
—
—
estimate
—
0
0
20
143
1.50
0.78
3.1
6.7
101.30
103.34
mmol/l
0.82
20
143
6
34
1.81
0.77
2.7
3.4
—
—
—
0
0
5
25
2.05
0.74
1.6
1.5
1.13
1.20
g/l
—
5
25
5
25
2.05
0.74
1.6
1.4
0.21
0.23
g/l
—
5
25
7
41
1.76
0.71
2.3
3.1
110.00
930.08
u/ml
—
7
36
45
378
1.34
0.71
3.1
2.1
96.37
97.07
pmol/l
0.04
28
198
34
274
1.36
0.70
2.0
1.8
20.98
22.05
nmol/l
0.15
28
219
24
183
1.41
0.68
1.5
1.3
1.08
1.08
u/ml
—
5
57
10
63
1.65
0.64
1.9
3.8
—
—
—
0
0
13
88
1.55
0.64
4.2
2.7
69.81
66.31
g/l
0.87
13
79
0
20
0.00
0.61
0.0
3.3
—
—
—
0
0
0
21
0.00
0.61
0.0
5.7
—
—
—
0
0
30
243
1.33
0.59
4.6
3.3
359.42
356.85
umol/l
0.05
24
210
8
54
1.52
0.59
1.1
3.6
1.14
1.12
%
—
8
54
86
808
1.41
0.56
25.8
17.8
27.83
24.98
mg/l
0.32
75
683
6
38
1.61
0.55
1.7
1.2
—
—
—
0
0
31
255
1.31
0.55
3.5
3.6
0.00
0.00
estimate
-0.00
12
74
41
351
1.28
0.54
3.9
4.4
0.00
0.04
estimate
0.49
12
77
33
277
1.28
0.50
3.2
3.0
0.31
0.31
e6/l
0.01
22
203
7
45
1.60
0.50
1.6
1.2
—
—
—
0
0
41
357
1.25
0.46
4.6
4.2
49.66
62.63
e6/l
0.14
26
258
80
751
1.30
0.46
4.6
4.5
1.34
1.30
mmol/l
0.22
72
684
8
55
1.49
0.44
1.1
3.6
0.83
0.67
%
—
8
55
35
302
1.24
0.42
3.9
3.3
5.94
8.34
mmol/l
3.50
27
249
0
15
0.00
0.41
0.0
2.7
—
10.53
—
0
15
26
218
1.26
0.39
3.3
3.3
0.63
0.73
ug/l
0.40
17
132
41
366
1.20
0.35
4.1
4.4
26.54
36.33
ng/l
0.44
27
289
7
55
1.29
0.30
1.3
4.9
36.86
36.90
°c
—
7
55
36
323
1.18
0.28
3.2
3.3
15.12
236.14
e6/l
0.58
25
250
32
286
1.17
0.26
2.7
2.4
—
—
—
0
0
36
327
1.16
0.24
3.0
3.4
—
—
—
0
0
10
79
1.29
0.23
1.3
1.6
—
—
—
0
0
32
290
1.15
0.22
3.2
3.2
76.03
52.18
mg/l
0.20
12
197
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.7
—
16.87
—
0
10
0
10
0.00
0.21
0.0
3.1
—
3.82
—
0
10
0
12
0.00
0.21
0.0
5.6
—
—
—
0
0
0
13
0.00
0.21
0.0
1.8
—
—
—
0
0
0
14
0.00
0.20
0.0
1.7
—
44.14
—
0
14
26
233
1.16
0.20
2.0
2.8
2.87
3.88
e6/l
0.56
17
210
6
50
1.21
0.20
1.0
1.2
—
—
—
0
0
33
302
1.14
0.19
4.0
4.0
17.79
8.63
mg/mmol
0.36
12
195
7
85
0.81
0.15
1.1
1.6
—
—
—
0
0
29
268
1.11
0.14
4.3
4.9
0.00
0.03
estimate
0.74
13
93
10
86
1.18
0.11
4.0
7.9
1.12
1.29
mmol/l
—
10
86
5
43
1.17
0.10
1.0
1.1
—
—
—
0
0
5
45
1.12
0.10
1.6
1.9
—
—
—
0
0
6
57
1.06
0.08
1.5
1.4
—
—
—
0
0
5
60
0.82
0.08
5.0
3.4
7.45
7.42
ph
—
5
47
7
65
1.08
0.08
6.3
7.7
25.17
24.68
mmol/l
—
7
65
7
67
1.05
0.08
6.1
4.2
—
—
—
0
0
8
94
0.84
0.07
2.9
2.0
216.13
372.97
nmol/l
—
8
86
23
218
1.07
0.05
1.4
1.4
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
5.46
—
0
7
0
8
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
120.80
—
0
5
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
61.29
—
0
7
0
5
0.00
-0.00
0.0
5.4
—
0.57
—
0
5
0
8
0.00
-0.00
0.0
2.8
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.6
—
—
—
0
0
7
70
1.00
-0.00
1.6
1.3
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
235.40
—
0
5
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
7.2
—
40.00
—
0
5
0
9
0.00
-0.00
0.0
1.8
—
9.43
—
0
9
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
9
95
0.94
-0.00
4.9
7.9
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
5.64
—
0
5
0
5
0.00
-0.00
0.0
1.0
—
40.90
—
0
5
0
7
0.00
-0.00
0.0
2.4
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint L12_PARAPSO_PLAQUE and mortality.

Females

No data

Males

Parameter HR [95% CI] p-value
L12_PARAPSO_PLAQUE 0.861 [0.68, 1.09] 0.211
Birth year 0.982 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 89 out of 367 males with L12_PARAPSO_PLAQUE died.

Mortality risk

Mortality risk for people of age

years, who have L12_PARAPSO_PLAQUE.

N-year risk Females Males
1 No data 0.148%
5 No data 0.872%
10 No data 2.253%
15 No data 4.263%
20 No data 7.145%

Relationships between endpoints

Index endpoint: L12_PARAPSO_PLAQUE – Small plaque parapsoriasis

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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