Excessive and redundant skin and subcutaneous tissue

L12_EXCESSSKINDANDSUBCUTIS

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L987
  • Cause of death: ICD-10 L987

2 out of 7 registries used, show all original rules.

83

4. Check minimum number of events

None

83

5. Include endpoints

None

83

6. Filter based on genotype QC (FinnGen only)

78

Control definitions (FinnGen only)

Control exclude
L12_OTHERSKINSUBCUTIS

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 49 48 -
Only index persons 49 48 -
Unadjusted period prevalence (%)
Whole population 0.00 0.00 -
Only index persons 0.00 0.00 -
Median age at first event (years)
Whole population - 51.65 -
Only index persons 51.20 51.65 -

-FinnGen-

Key figures

All Female Male
Number of individuals 78 70 8
Unadjusted period prevalence (%) 0.02 0.02 0.00
Median age at first event (years) 57.09 56.85 59.25

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
82
Matched controls
820
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
L98.7
ICD-10 Finland
Excessive and redundant skin and subcutaneous tissue
+∞
118.0
82
*
QBJ30
NOMESCO Finland
Correction of abdominal apron
69.4
19.0
21
*
E66.01
ICD-10 Finland
Obesity due to excess calories
6.1
12.7
29
68
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
4.1
8.6
35
127
JDF11
NOMESCO Finland
Laparoscopic gastric bypass
25.1
8.3
11
5
N02AX02
ATC
tramadol; systemic, rectal
3.8
8.2
49
230
WX402
NOMESCO Finland
General anaesthesia
3.8
7.8
35
135
WZC30
NOMESCO Finland
Teaching
4.2
7.6
25
77
Z00.4
ICD-10 Finland
General psychiatric examination, not elsewhere classified
5.1
7.5
18
43
R42
ICD-10 Finland
Dizziness and giddiness
3.9
7.3
28
96
T81.4
ICD-10 Finland
Infection following a procedure, not elsewhere classified
4.4
6.8
20
56
E66.8
ICD-10 Finland
Other obesity
6.4
6.6
17
32

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
66
355
5.40
9.59
3.1
2.6
—
—
estimate
—
0
0
46
221
3.46
7.14
2.7
2.9
10.83
16.49
ng/l
1.45
26
125
48
250
3.22
6.30
2.3
2.1
—
—
—
0
0
43
245
2.59
4.30
1.6
1.7
—
—
—
0
0
24
103
2.88
4.16
1.9
2.0
—
—
—
0
0
72
541
3.71
4.04
12.8
7.5
72.97
75.79
u/l
0.32
72
515
31
156
2.59
3.94
3.8
3.8
—
—
—
0
0
7
8
9.42
3.85
1.9
1.5
6.91
5.87
mmol/l
—
7
8
7
9
8.37
3.63
2.0
1.7
0.94
1.11
mmol/l
—
7
9
34
185
2.43
3.62
3.2
3.3
0.18
0.23
e6/l
0.17
29
134
18
71
2.97
3.59
2.2
6.6
105.17
104.44
mmol/l
0.39
18
71
38
222
2.33
3.41
3.4
3.2
1961.12
65.91
e6/l
0.49
33
169
9
19
5.18
3.34
1.7
1.9
25.94
25.53
mmol/l
—
9
19
48
315
2.26
3.21
5.3
3.2
6.50
6.27
ph
0.83
31
174
35
202
2.28
3.19
4.1
2.7
—
—
—
0
0
8
16
5.41
3.13
3.5
5.9
—
—
—
0
0
10
26
4.23
3.10
3.9
3.3
12.70
43.75
u/ml
—
10
26
6
9
7.08
2.92
4.5
1.9
—
—
—
0
0
41
261
2.14
2.86
3.6
6.9
1.00
1.06
inr
1.66
36
209
55
395
2.19
2.78
5.5
3.5
0.00
0.00
estimate
-0.00
14
80
19
88
2.51
2.78
1.4
1.5
—
—
—
0
0
54
388
2.15
2.69
5.6
3.5
0.00
0.00
estimate
-0.00
14
77
43
284
2.08
2.68
5.8
3.1
0.00
0.01
estimate
0.49
12
69
17
76
2.56
2.66
1.9
2.5
2.53
2.45
g/l
0.25
17
67
54
390
2.13
2.63
5.7
3.5
0.00
0.00
estimate
-0.00
14
79
21
105
2.34
2.60
1.8
3.3
3.84
3.63
e6/l
0.03
13
48
41
271
2.03
2.51
4.1
4.0
156.18
29.26
e6/l
0.63
36
183
33
202
2.06
2.48
5.3
3.3
0.00
0.00
estimate
-0.00
11
76
16
72
2.52
2.47
1.9
2.6
29.80
24.06
%
1.17
16
67
13
55
2.62
2.25
2.8
7.1
7.43
7.41
ph
—
8
33
42
289
1.93
2.21
2.6
2.0
99.69
102.72
pmol/l
0.19
32
153
7
20
3.72
2.10
1.9
4.2
36.86
36.96
°c
—
7
20
8
26
3.29
2.07
1.0
1.4
—
—
—
0
0
33
214
1.91
2.04
4.0
2.6
—
—
—
0
0
32
206
1.91
2.02
3.5
3.3
7.39
7.40
ph
0.66
22
142
9
33
2.93
2.00
1.6
9.6
1.06
1.18
%
—
9
33
9
33
2.93
2.00
1.6
9.5
0.77
0.70
%
—
9
33
5
11
4.76
1.97
1.2
4.0
3.64
3.75
mmol/l
—
5
11
82
766
+∞
1.94
25.7
14.5
66.93
68.29
umol/l
0.38
82
754
82
766
+∞
1.94
19.2
10.0
—
—
—
0
0
7
22
3.38
1.92
1.7
3.7
—
—
—
0
0
21
121
1.99
1.80
1.6
1.5
626.67
533.33
titre
—
6
30
9
36
2.68
1.80
1.6
9.1
95.66
93.99
%
—
9
36
26
162
1.89
1.78
6.1
3.3
1.02
1.02
kg/l
0.20
18
103
14
71
2.17
1.66
1.1
1.5
—
—
—
0
0
61
501
1.85
1.61
3.7
3.2
—
—
—
0
0
11
51
2.34
1.59
1.1
1.2
—
—
—
0
0
5
15
3.48
1.54
1.2
3.7
0.60
1.05
mmol/l
—
5
15
17
98
1.93
1.45
1.2
1.2
—
—
—
0
0
28
191
1.71
1.39
6.8
4.4
—
—
—
0
0
77
702
2.59
1.38
5.6
4.1
5.67
5.63
mmol/l
0.17
72
662
5
17
3.06
1.38
1.0
1.5
—
—
—
0
0
19
116
1.83
1.36
1.3
1.6
—
—
—
0
0
29
202
1.67
1.33
1.8
2.2
—
—
—
0
0
29
204
1.65
1.28
1.3
1.4
2.20
2.09
g/l
0.19
18
128
58
485
1.67
1.27
5.8
4.4
—
60.67
—
0
6
5
19
2.73
1.23
1.0
1.5
—
—
—
0
0
10
50
2.14
1.22
1.6
1.3
—
—
—
0
0
26
182
1.63
1.16
3.0
2.9
62.81
65.59
mg/l
0.02
15
104
31
228
1.58
1.12
1.4
1.3
0.67
1.33
u/ml
—
7
69
7
32
2.30
1.11
1.4
1.3
—
—
—
0
0
26
184
1.60
1.10
3.4
3.4
8.83
9.63
mg/mmol
0.04
18
100
7
33
2.22
1.08
1.4
1.6
—
—
—
0
0
9
50
1.90
1.00
1.7
6.8
1.26
1.06
mmol/l
—
9
50
30
226
1.52
0.96
9.4
7.6
—
—
—
0
0
6
27
2.32
0.95
2.0
2.7
1.05
1.03
%
—
6
27
6
27
2.32
0.95
2.0
2.6
0.63
0.57
%
—
6
27
14
88
1.71
0.91
1.5
1.3
—
—
—
0
0
5
98
0.48
0.84
1.0
1.3
—
—
—
0
0
24
177
1.50
0.84
1.6
1.8
—
—
—
0
0
5
23
2.25
0.77
1.2
1.3
—
—
—
0
0
5
24
2.15
0.76
1.0
1.3
—
—
—
0
0
16
111
1.55
0.73
1.3
1.2
—
—
—
0
0
40
335
1.38
0.69
2.7
1.9
—
—
—
0
0
5
29
1.77
0.65
1.2
2.8
—
—
—
0
0
5
29
1.77
0.65
3.2
1.7
0.23
0.23
g/l
—
5
29
0
20
0.00
0.61
0.0
2.6
—
9.57
—
0
20
5
87
0.55
0.60
1.2
1.4
—
—
—
0
0
6
36
1.72
0.58
1.3
2.5
24.83
24.75
mmol/l
—
6
36
9
59
1.59
0.57
5.2
4.7
7.38
7.33
ph
—
9
43
10
66
1.59
0.55
1.3
1.4
—
—
—
0
0
27
220
1.34
0.53
4.4
2.7
0.00
0.02
estimate
0.49
12
66
7
49
1.47
0.47
1.7
7.4
—
—
—
0
0
8
55
1.50
0.44
1.3
1.1
—
—
—
0
0
0
15
0.00
0.41
0.0
3.0
—
55.24
—
0
15
82
805
+∞
0.41
32.6
19.1
90.60
90.57
fl
0.02
82
799
82
805
+∞
0.41
32.9
19.2
134.62
134.30
g/l
0.10
82
799
82
805
+∞
0.41
32.8
19.1
4.49
4.48
e12/l
0.08
82
790
82
805
+∞
0.41
32.5
19.1
30.19
30.14
pg
0.11
82
799
82
805
+∞
0.41
32.7
19.5
40.45
40.26
%
0.22
82
799
82
805
+∞
0.41
32.8
19.2
6.87
6.51
e9/l
0.98
82
790
82
804
+∞
0.41
32.8
19.2
259.13
262.64
e9/l
0.21
82
792
5
34
1.50
0.41
1.4
6.5
25.10
24.92
mmol/l
—
5
34
27
232
1.24
0.35
8.1
4.5
—
—
—
0
0
14
111
1.32
0.32
2.4
3.1
5.50
34.10
ng/l
—
8
71
22
187
1.24
0.31
1.4
1.4
54.92
18.53
iu/ml
—
5
65
12
96
1.29
0.26
2.1
2.1
—
—
—
0
0
6
80
0.73
0.25
1.0
1.4
9.95
24.35
iu/l
—
6
73
5
39
1.30
0.23
1.0
1.1
1.59
1.61
g/l
—
5
39
5
39
1.30
0.23
1.4
1.5
—
—
—
0
0
5
40
1.27
0.23
1.0
1.1
0.70
0.83
g/l
—
5
40
10
80
1.28
0.21
1.5
1.3
—
—
—
0
0
0
10
0.00
0.21
0.0
1.4
—
23.52
—
0
10
0
12
0.00
0.21
0.0
2.6
—
—
—
0
0
6
47
1.30
0.21
3.0
2.6
78.92
73.94
e9/l
—
6
32
6
50
1.22
0.20
1.3
2.4
—
—
—
0
0
15
173
0.84
0.19
1.5
1.4
1.26
8.99
u/ml
—
8
77
9
78
1.17
0.16
1.1
1.1
—
—
—
0
0
35
332
1.09
0.10
4.1
2.6
—
—
—
0
0
7
66
1.07
0.08
2.3
1.8
—
—
—
0
0
12
128
0.93
0.03
1.2
1.6
—
—
—
0
0
14
136
1.04
0.00
1.8
1.9
—
—
—
0
0
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
17.3
—
902.17
—
0
6
0
5
0.00
-0.00
0.0
2.0
—
41.58
—
0
5
0
5
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
6
66
0.90
-0.00
2.7
2.4
2.08
1.79
%
—
6
59
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
28.0
—
1745.67
—
0
6
0
7
0.00
-0.00
0.0
2.9
—
3.47
—
0
7
0
5
0.00
-0.00
0.0
1.6
—
64.60
—
0
5
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
2.2
—
11.52
—
0
9
0
7
0.00
-0.00
0.0
1.0
—
5.61
—
0
7
0
6
0.00
-0.00
0.0
1.7
—
0.00
—
0
6
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
8.00
—
0
5
5
57
0.87
-0.00
4.6
3.3
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
312.40
—
0
5
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint L12_EXCESSSKINDANDSUBCUTIS and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have L12_EXCESSSKINDANDSUBCUTIS.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: L12_EXCESSSKINDANDSUBCUTIS – Excessive and redundant skin and subcutaneous tissue

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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