Subclinical iodine-deficiency hypothyroidism

E4_IODHYPSUB

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 E02
  • Cause of death: ICD-10 E02

2 out of 7 registries used, show all original rules.

58

4. Check minimum number of events

None

58

5. Include endpoints

None

58

6. Filter based on genotype QC (FinnGen only)

54

Control definitions (FinnGen only)

Control exclude
E4_THYROID

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
E00-E07
Name in latin
Hypothyreosis subclinica ex deficientia iodi

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 326 238 86
Only index persons 302 223 79
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.00
Only index persons 0.01 0.01 0.00
Median age at first event (years)
Whole population 64.28 63.43 66.30
Only index persons 62.37 60.81 66.78

-FinnGen-

Key figures

All Female Male
Number of individuals 54 36 18
Unadjusted period prevalence (%) 0.01 0.01 0.01
Median age at first event (years) 60.41 60.25 60.72

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
55
Matched controls
550
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
E02
ICD-10 Finland
Subclinical iodine-deficiency hypothyroidism
+∞
76.1
54
*
H03AA01
ATC
levothyroxine sodium; systemic
239.2
45.0
42
7
E03.9
ICD-10 Finland
Hypothyroidism, unspecified
178.0
22.5
22
*
T86
ICPC
Hypothyroidism/myxoedema
+∞
9.6
9
*
104
Kela drug reimbursment
Thyroid insufficiency
+∞
8.5
8
*
E03
ICD-10 Finland
Other hypothyroidism
52.8
8.0
9
*
E04.2
ICD-10 Finland
Nontoxic multinodular goitre
+∞
7.4
7
*
E03.89
ICD-10 Finland
Other specified hypothyroidism
78.6
6.6
7
*

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
36
229
2.66
2.94
2.4
2.0
75.22
98.18
pmol/l
1.64
17
113
6
14
4.67
2.21
1.3
1.1
0.21
0.27
g/l
—
6
14
29
184
2.22
2.17
4.3
3.9
34.61
29.93
ng/l
0.11
18
138
6
15
4.35
2.10
1.3
1.1
1.20
1.32
g/l
—
6
15
15
78
2.27
1.75
4.5
6.2
106.73
103.29
mmol/l
2.75
15
78
27
178
2.02
1.73
5.1
4.1
—
—
—
0
0
10
44
2.55
1.66
2.8
3.4
69.84
67.48
g/l
—
10
39
10
44
2.55
1.66
3.5
3.0
—
—
—
0
0
13
66
2.27
1.59
4.4
4.1
1.07
1.03
mmol/l
0.25
13
61
11
52
2.39
1.57
2.5
1.7
—
—
—
0
0
9
42
2.36
1.42
6.3
7.8
0.93
1.18
mmol/l
—
9
42
33
246
1.85
1.37
11.5
14.7
1.28
1.26
inr
0.06
28
194
12
63
2.16
1.35
5.3
7.2
0.27
1.78
mmol/l
1.58
12
53
8
36
2.43
1.31
6.9
9.2
0.59
0.74
%
—
8
36
8
36
2.43
1.31
6.9
8.7
23.88
25.51
mmol/l
—
8
36
8
37
2.36
1.28
1.3
1.2
—
—
—
0
0
8
37
2.36
1.28
6.9
9.1
1.44
1.51
%
—
8
37
24
166
1.79
1.24
4.4
4.1
7.41
7.40
ph
0.48
18
116
21
140
1.81
1.22
3.0
2.9
—
—
estimate
—
0
0
8
39
2.23
1.21
7.9
9.3
—
—
—
0
0
16
98
1.89
1.20
2.2
1.3
2.97
2.49
g/l
0.26
11
52
10
52
2.13
1.15
6.0
8.1
131.10
116.85
g/l
—
10
52
5
22
2.40
1.05
1.4
1.0
—
—
—
0
0
10
54
2.04
1.04
3.3
2.2
1.41
1.76
%
—
10
48
50
448
2.27
1.02
13.6
4.0
2.50
1.88
mu/l
1.15
50
405
33
260
1.67
1.01
10.0
6.0
0.58
0.61
e9/l
0.24
27
213
23
165
1.68
1.01
5.0
3.3
68.81
46.04
mg/l
0.19
16
112
12
71
1.88
0.98
2.6
2.1
2.25
2.32
g/l
0.14
12
61
33
262
1.65
0.97
10.1
6.0
0.04
0.04
e9/l
0.09
27
210
22
158
1.65
0.95
3.2
3.5
—
—
—
0
0
8
42
2.06
0.93
3.6
2.1
273.38
370.46
nmol/l
—
8
37
10
57
1.92
0.90
5.6
7.6
96.17
94.05
%
—
10
57
6
32
1.98
0.84
1.0
1.2
—
—
—
0
0
12
76
1.74
0.79
2.5
2.2
12.42
12.78
umol/l
0.08
12
70
11
68
1.77
0.79
1.7
1.4
—
—
—
0
0
5
23
2.29
0.78
4.0
3.0
24.92
23.72
mmol/l
—
5
23
7
41
1.81
0.73
1.9
2.6
31.04
6.66
ug/l
—
7
36
16
113
1.59
0.72
1.6
1.2
1.13
2.11
u/ml
—
6
29
11
70
1.71
0.72
2.7
2.0
23.65
23.40
%
0.02
11
65
33
275
1.50
0.69
10.0
6.4
0.20
0.19
e9/l
0.09
27
235
29
236
1.48
0.68
17.3
12.1
0.00
0.01
e9/l
0.51
23
178
32
266
1.49
0.67
10.5
5.9
2.39
1.81
e9/l
0.52
27
231
5
29
1.79
0.65
2.0
2.6
1.92
1.70
%
—
5
29
28
229
1.45
0.63
7.3
6.3
1.21
1.22
mmol/l
0.09
28
217
22
172
1.47
0.62
6.0
3.9
10.09
9.35
mg/mmol
0.03
15
110
0
20
0.00
0.61
0.0
1.1
—
—
—
0
0
6
35
1.80
0.60
5.5
5.3
24.53
25.59
mmol/l
—
6
35
11
74
1.61
0.59
1.1
1.2
—
—
—
0
0
6
39
1.60
0.55
1.7
2.0
55.17
155.45
ng/l
—
6
33
44
398
1.53
0.54
30.1
20.9
13.76
13.87
%
0.21
44
391
11
77
1.54
0.50
2.0
2.0
—
—
—
0
0
29
247
1.37
0.48
2.9
2.9
—
—
estimate
—
0
0
18
142
1.40
0.46
4.0
2.7
369.22
347.10
umol/l
0.40
18
125
21
171
1.37
0.45
7.7
5.4
—
—
—
0
0
21
171
1.37
0.45
3.8
3.0
—
—
—
0
0
5
32
1.62
0.43
2.2
1.5
—
—
—
0
0
0
17
0.00
0.41
0.0
3.7
—
58.97
—
0
17
18
145
1.36
0.41
4.4
4.4
—
—
—
0
0
27
232
1.32
0.40
11.1
5.5
55.41
59.13
%
0.74
27
217
23
194
1.32
0.38
2.3
2.3
—
—
—
0
0
33
297
1.28
0.32
12.8
11.6
3.89
4.23
e9/l
0.36
27
255
18
150
1.30
0.32
3.7
2.9
0.00
0.00
estimate
—
5
36
25
221
1.24
0.27
3.1
2.1
—
—
—
0
0
25
222
1.23
0.25
4.3
3.6
6.47
6.31
ph
0.32
16
114
13
108
1.27
0.22
8.9
4.9
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
11
0.00
0.21
0.0
1.2
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
2.8
—
—
—
0
0
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
0
10
0.00
0.21
0.0
2.1
—
15.52
—
0
10
0
12
0.00
0.21
0.0
1.2
—
—
—
0
0
6
47
1.31
0.21
2.0
1.5
—
—
—
0
0
18
157
1.22
0.21
4.1
3.8
0.00
0.00
estimate
—
6
44
0
14
0.00
0.20
0.0
1.4
—
243.20
—
0
5
42
398
1.23
0.20
30.2
22.3
331.26
331.76
g/l
0.16
42
398
8
67
1.23
0.18
1.8
1.5
—
—
—
0
0
31
288
1.18
0.17
4.5
3.9
0.00
0.00
estimate
—
6
42
11
125
0.85
0.11
4.0
4.3
1.01
1.02
kg/l
—
5
74
5
46
1.10
0.10
3.4
1.7
—
—
—
0
0
50
490
1.22
0.09
27.2
19.4
139.80
139.50
mmol/l
0.41
50
479
23
216
1.11
0.08
4.3
3.6
0.00
0.00
estimate
—
6
40
30
286
1.11
0.08
4.5
3.8
0.00
34.55
estimate
—
6
47
9
85
1.07
0.07
2.4
1.8
—
—
—
0
0
13
120
1.11
0.05
2.4
3.2
2.44
2.45
mmol/l
0.17
13
107
16
170
0.92
0.05
8.5
8.1
—
—
—
0
0
14
134
1.06
0.01
1.9
1.4
—
—
—
0
0
0
6
0.00
0.00
0.0
2.5
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.7
—
88.27
—
0
6
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.6
—
0.61
—
0
7
0
5
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
7
75
0.92
-0.00
1.6
1.3
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.2
—
56.88
—
0
9
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
7
0.00
-0.00
0.0
2.4
—
8.13
—
0
7
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint E4_IODHYPSUB and mortality.

Females

Parameter HR [95% CI] p-value
E4_IODHYPSUB 1.248 [0.81, 1.93] 0.321
Birth year 0.995 [0.99, 1.0] 0.261

During the follow-up period (1.1.1998 — 31.12.2019), 52 out of 212 females with E4_IODHYPSUB died.

Males

No data

Mortality risk

Mortality risk for people of age

years, who have E4_IODHYPSUB.

N-year risk Females Males
1 0.133% No data
5 0.77% No data
10 1.857% No data
15 3.379% No data
20 5.813% No data

Relationships between endpoints

Index endpoint: E4_IODHYPSUB – Subclinical iodine-deficiency hypothyroidism

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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