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Plasmodium malariae malaria, including avohilmo

AB1_MALARIA_MALARIAE_WIDE

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

557745

1. Apply sex-specific rule

None

557745

2. Check conditions

None

557745

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Primary healthcare outpatient: ICD-10 B52
  • Hospital discharge: ICD-10 B52
  • Cause of death: ICD-10 B52

3 out of 7 registries used, show all original rules.

7

4. Check minimum number of events

None

7

5. Include endpoints

None

7

6. Filter based on genotype QC (FinnGen only)

5

Control definitions (FinnGen only)

Control exclude
AB1_PROTOZOAL

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF5

Case counts by codes

FinnGen case counts by registry codes:

Not enough data for upset plot.

Not enough data for upset table.

Summary Statistics

-FinRegistry-

This endpoint is excluded (different definition than used in FinnGen).

-FinnGen-

Key figures

All Female Male
Number of individuals 5 - -
Unadjusted period prevalence (%) 0.00 - -
Median age at first event (years) 43.43 - -

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
0
36
0.00
1.89
0.0
3.3
—
—
—
0
0
0
12
0.00
0.23
0.0
1.5
—
—
—
0
0
7
65
+∞
-0.00
30.1
15.8
—
—
—
0
0
7
70
0.00
-0.00
80.7
24.7
37.29
41.17
%
—
7
70
7
62
+∞
-0.00
8.4
5.5
2.30
1.93
mu/l
—
7
57
7
70
0.00
-0.00
79.4
24.4
31.71
30.23
pg
—
7
70
0
7
0.00
-0.00
0.0
2.4
—
25.80
—
0
7
7
70
0.00
-0.00
83.3
24.5
122.71
135.89
g/l
—
7
70
7
70
0.00
-0.00
79.7
24.4
96.00
91.21
fl
—
7
70

Mortality – FinRegistry

This endpoint is excluded (different definition than used in FinnGen).

Relationships between endpoints

Index endpoint: AB1_MALARIA_MALARIAE_WIDE – Plasmodium malariae malaria, including avohilmo

GWS hits: -

This endpoint is excluded (different definition than used in FinnGen).