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This is a non-core endpoint: only basic statistics are computed.

Malignant neoplasm of trachea, including Hilmo

Endpoint Browser

C3_TRACHEA_WIDE

Endpoint definition

↥

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — C33
  • Hospital discharge: ICD-9 — 1620
  • Hospital discharge: ICD-8 — 1620
  • Cause of death: ICD-10 — C33
  • Cause of death: ICD-9 — 1620
  • Cause of death: ICD-8 — 1620
  • Cancer registry: Topography ICD-O-3 — C33
  • Cancer registry: Morphology ICD-O-3 — ANY
  • Cancer registry: Behaviour codes — 3

3 out of 7 registries used, show all original rules.

36

4. Check minimum number of events

None

36

5. Include endpoints

None

36

6. Filter based on genotype QC (FinnGen only)

36

Control definitions (FinnGen only)

Control exclude
C3_CANCER, C3_CANCER_WIDE

Extra metadata

First used in FinnGen datafreeze
DF12

Case counts by codes

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FinnGen case counts by registry codes:

No upset plot: unknown.

No upset table: unknown.

Summary Statistics

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-FinRegistry-

This endpoint is excluded (different definition than used in FinnGen).

-FinnGen-

Key figures

All Female Male
Number of individuals 36 10 26
Unadjusted period prevalence (%) 0.01 0.00 0.01
Median age at first event (years) 64.24 52.30 68.83

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

↥

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

↥
OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
6
5
13.99
3.91
3.2
1.0
—
—
—
0
0
6
19
3.57
1.74
1.8
1.1
—
—
—
0
0
11
185
0.42
1.57
6.8
4.2
11.27
12.79
mm/h
0.14
11
163
17
233
0.49
1.23
33.2
15.6
73.88
88.33
umol/l
1.76
17
233
15
212
0.50
1.16
4.5
6.8
38.88
40.94
mmol/mol
—
10
193
6
111
0.45
1.07
2.2
4.3
4.27
2.39
ug/l
—
6
93
6
28
2.36
0.97
2.3
1.5
—
—
—
0
0
6
33
1.98
0.83
3.3
1.8
—
—
—
0
0
19
236
0.59
0.75
26.6
13.3
—
—
—
0
0
11
157
0.57
0.74
3.5
4.3
—
—
—
0
0
0
19
0.00
0.62
0.0
2.5
—
131.26
—
0
19
0
19
0.00
0.62
0.0
2.6
—
—
—
0
0
9
63
1.57
0.58
7.4
1.5
—
—
—
0
0
10
68
1.65
0.54
6.8
4.4
—
—
—
0
0
0
16
0.00
0.42
0.0
15.8
—
—
—
0
0
0
16
0.00
0.42
0.0
2.1
—
0.63
—
0
16
0
16
0.00
0.42
0.0
1.2
—
—
—
0
0
0
16
0.00
0.42
0.0
1.2
—
131.93
—
0
6
0
17
0.00
0.42
0.0
2.0
—
1.60
—
0
17
0
17
0.00
0.42
0.0
2.4
—
—
—
0
0
14
110
1.45
0.40
8.3
13.7
1.23
1.23
inr
—
6
35
5
36
1.45
0.40
5.8
1.6
—
—
—
0
0
5
69
0.68
0.29
2.0
3.6
—
—
—
0
0
0
11
0.00
0.22
0.0
2.2
—
1.46
—
0
11
0
11
0.00
0.22
0.0
2.2
—
7.77
—
0
11
0
11
0.00
0.22
0.0
1.0
—
—
—
0
0
0
11
0.00
0.22
0.0
1.4
—
24.66
—
0
11
0
13
0.00
0.21
0.0
5.5
—
24.68
—
0
13
0
14
0.00
0.20
0.0
1.7
—
15.66
—
0
14
0
14
0.00
0.20
0.0
1.8
—
—
—
0
0
8
66
1.27
0.19
6.5
2.1
—
—
—
0
0
8
67
1.25
0.18
1.1
3.3
—
—
—
0
0
8
68
1.23
0.18
1.5
2.6
—
—
—
0
0
8
71
1.16
0.18
2.0
2.2
44.88
53.37
u/l
—
8
65
9
106
0.80
0.15
7.7
4.8
3.36
2.88
%
—
9
94
9
105
0.81
0.15
7.7
4.6
0.82
0.63
%
—
9
93
5
43
1.19
0.10
4.8
1.9
2.47
2.44
mmol/l
—
5
34
11
97
1.19
0.10
6.8
3.8
33.64
35.02
g/l
0.32
11
92
10
108
0.90
0.03
6.4
4.7
65.72
59.71
%
—
10
96
10
108
0.90
0.03
7.0
5.1
20.23
25.01
%
—
10
97
10
107
0.91
0.02
7.0
5.0
8.65
8.76
%
—
10
94
11
116
0.93
0.01
6.5
4.5
0.17
0.20
e9/l
0.61
11
98
14
146
0.93
0.01
4.4
4.7
6.88
6.84
mmol/l
0.01
14
131
10
104
0.95
0.00
7.8
5.3
—
—
—
0
0
11
109
1.01
0.00
6.5
4.6
0.61
0.63
e9/l
0.12
11
94
16
163
0.97
0.00
4.9
4.2
—
—
—
0
0
11
111
0.99
0.00
6.5
4.9
1.46
1.83
e9/l
1.04
11
99
11
111
0.99
0.00
6.5
4.6
0.03
0.05
e9/l
0.75
11
95
0
5
0.00
0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
2.4
—
—
—
0
0
0
5
0.00
0.00
0.0
2.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
11.44
—
0
5
0
9
0.00
-0.00
0.0
4.7
—
774.67
—
0
9
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.9
—
105.88
—
0
8
0
8
0.00
-0.00
0.0
5.6
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.9
—
4.20
—
0
8
9
91
0.99
-0.00
19.0
9.0
0.00
0.00
e9/l
—
9
69
0
6
0.00
-0.00
0.0
1.8
—
65.55
—
0
6
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
6
59
1.02
-0.00
2.8
3.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
5
48
1.05
-0.00
1.8
1.3
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.9
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
5
54
0.91
-0.00
15.4
3.3
—
—
—
0
0

Mortality – FinRegistry

↥

This endpoint is excluded (different definition than used in FinnGen).

Relationships between endpoints

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Index endpoint: C3_TRACHEA_WIDE – Malignant neoplasm of trachea, including Hilmo

GWS hits: -

This endpoint is excluded (different definition than used in FinnGen).